RNA–Protein interactions for RNA: ENST00000517238.1

SNORA40.16-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 121 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.16-201ENST00000517238 R4GN57 208 aa-1.71□□□□□ -2.68
SNORA40.16-201ENST00000517238 PRR14LQ5THK1 2151 aa-1.72□□□□□ -2.68
SNORA40.16-201ENST00000517238 SCN1AP35498 2009 aa-1.72□□□□□ -2.68
SNORA40.16-201ENST00000517238 STARD9Q9P2P6 4700 aa-1.72□□□□□ -2.68
SNORA40.16-201ENST00000517238 IGKV2-40A0A087WW87 121 aaPredicted RBP-1.72□□□□□ -2.68
SNORA40.16-201ENST00000517238 A0A0J9YXY3 114 aa-1.72□□□□□ -2.68
SNORA40.16-201ENST00000517238 GJE1A6NN92 205 aa-1.72□□□□□ -2.68
SNORA40.16-201ENST00000517238 CLCA1A8K7I4 914 aa-1.72□□□□□ -2.68
SNORA40.16-201ENST00000517238 RNF103O00237 685 aa-1.72□□□□□ -2.68
SNORA40.16-201ENST00000517238 AREL1O15033 823 aa-1.72□□□□□ -2.68
SNORA40.16-201ENST00000517238 SPRY1O43609 319 aaPredicted RBP-1.72□□□□□ -2.68
SNORA40.16-201ENST00000517238 IGKV2D-40P01614 121 aaPredicted RBP-1.72□□□□□ -2.68
SNORA40.16-201ENST00000517238 HLA-DQA1P01909 254 aa-1.72□□□□□ -2.68
SNORA40.16-201ENST00000517238 VPREB1P12018 145 aa-1.72□□□□□ -2.68
SNORA40.16-201ENST00000517238 RARGP13631 454 aa-1.72□□□□□ -2.68
SNORA40.16-201ENST00000517238 C4BPBP20851 252 aa-1.72□□□□□ -2.68
SNORA40.16-201ENST00000517238 VAMP1P23763 118 aa-1.72□□□□□ -2.68
SNORA40.16-201ENST00000517238 ERCC5P28715 1186 aaPredicted RBP-1.72□□□□□ -2.68
SNORA40.16-201ENST00000517238 UGT1A5P35504 534 aa-1.72□□□□□ -2.68
SNORA40.16-201ENST00000517238 HNF1BP35680 557 aa-1.72□□□□□ -2.68
SNORA40.16-201ENST00000517238 SERPINF1P36955 418 aa-1.72□□□□□ -2.68
SNORA40.16-201ENST00000517238 PEX3P56589 373 aa-1.72□□□□□ -2.68
SNORA40.16-201ENST00000517238 TAF10Q12962 218 aa-1.72□□□□□ -2.68
SNORA40.16-201ENST00000517238 DRAP1Q14919 205 aaPredicted RBP-1.72□□□□□ -2.68
SNORA40.16-201ENST00000517238 MICAQ29983 383 aa-1.72□□□□□ -2.68
SNORA40.16-201ENST00000517238 C14orf28Q4W4Y0 310 aa-1.72□□□□□ -2.68
SNORA40.16-201ENST00000517238 PHLDA2Q53GA4 152 aa-1.72□□□□□ -2.68
SNORA40.16-201ENST00000517238 SLC27A4Q6P1M0 643 aa-1.72□□□□□ -2.68
SNORA40.16-201ENST00000517238 APOA5Q6Q788 366 aa-1.72□□□□□ -2.68
SNORA40.16-201ENST00000517238 ABRAXAS1Q6UWZ7 409 aa-1.72□□□□□ -2.68
SNORA40.16-201ENST00000517238 LINGO4Q6UY18 593 aa-1.72□□□□□ -2.68
SNORA40.16-201ENST00000517238 SIGLEC15Q6ZMC9 328 aa-1.72□□□□□ -2.68
SNORA40.16-201ENST00000517238 OLIG3Q7RTU3 272 aa-1.72□□□□□ -2.68
SNORA40.16-201ENST00000517238 NRSN1Q8IZ57 195 aa-1.72□□□□□ -2.68
SNORA40.16-201ENST00000517238 RASGEF1AQ8N9B8 481 aa-1.72□□□□□ -2.68
SNORA40.16-201ENST00000517238 TEX19Q8NA77 164 aa-1.72□□□□□ -2.68
SNORA40.16-201ENST00000517238 PPFIBP2Q8ND30 876 aa-1.72□□□□□ -2.68
SNORA40.16-201ENST00000517238 OR5L2Q8NGL0 311 aa-1.72□□□□□ -2.68
SNORA40.16-201ENST00000517238 OR5M9Q8NGP3 310 aa-1.72□□□□□ -2.68
SNORA40.16-201ENST00000517238 OR13J1Q8NGT2 312 aa-1.72□□□□□ -2.68
SNORA40.16-201ENST00000517238 HM13Q8TCT9 377 aa-1.72□□□□□ -2.68
SNORA40.16-201ENST00000517238 TRAPPC12Q8WVT3 735 aa-1.72□□□□□ -2.68
SNORA40.16-201ENST00000517238 GIMAP1Q8WWP7 306 aa-1.72□□□□□ -2.68
SNORA40.16-201ENST00000517238 IRGQQ8WZA9 623 aa-1.72□□□□□ -2.68
SNORA40.16-201ENST00000517238 USP6NLQ92738 828 aa-1.72□□□□□ -2.68
SNORA40.16-201ENST00000517238 ZKSCAN4Q969J2 545 aaPredicted RBP-1.72□□□□□ -2.68
SNORA40.16-201ENST00000517238 FAM149B1Q96BN6 582 aa-1.72□□□□□ -2.68
SNORA40.16-201ENST00000517238 ODF3Q96PU9 254 aa-1.72□□□□□ -2.68
SNORA40.16-201ENST00000517238 GMLQ99445 158 aa-1.72□□□□□ -2.68
SNORA40.16-201ENST00000517238 GCOM2Q9BZD3 368 aaPredicted RBP-1.72□□□□□ -2.68
SNORA40.16-201ENST00000517238 ST6GALNAC4Q9H4F1 302 aa-1.72□□□□□ -2.68
SNORA40.16-201ENST00000517238 SLA2Q9H6Q3 261 aa-1.72□□□□□ -2.68
SNORA40.16-201ENST00000517238 C1orf115Q9H7X2 142 aa-1.72□□□□□ -2.68
SNORA40.16-201ENST00000517238 ARFGAP3Q9NP61 516 aa-1.72□□□□□ -2.68
SNORA40.16-201ENST00000517238 GDAP2Q9NXN4 497 aa-1.72□□□□□ -2.68
SNORA40.16-201ENST00000517238 ZNF639Q9UID6 485 aa-1.72□□□□□ -2.68
SNORA40.16-201ENST00000517238 DAPK2Q9UIK4 370 aa-1.72□□□□□ -2.68
SNORA40.16-201ENST00000517238 SMC3Q9UQE7 1217 aa-1.72□□□□□ -2.68
SNORA40.16-201ENST00000517238 SPEF1Q9Y4P9 236 aa-1.72□□□□□ -2.68
SNORA40.16-201ENST00000517238 CEPT1Q9Y6K0 416 aa-1.72□□□□□ -2.68
SNORA40.16-201ENST00000517238 U3KQK5 164 aa-1.72□□□□□ -2.68
SNORA40.16-201ENST00000517238 CENPJQ9HC77 1338 aaPredicted RBP-1.72□□□□□ -2.69
SNORA40.16-201ENST00000517238 FRMPD3Q5JV73 1810 aa-1.73□□□□□ -2.69
SNORA40.16-201ENST00000517238 hCG_38984A0A1B0GV85 526 aa-1.73□□□□□ -2.69
SNORA40.16-201ENST00000517238 E7EVH7 732 aa-1.73□□□□□ -2.69
SNORA40.16-201ENST00000517238 FBP2O00757 339 aa-1.73□□□□□ -2.69
SNORA40.16-201ENST00000517238 APAF1O14727 1248 aa-1.73□□□□□ -2.69
SNORA40.16-201ENST00000517238 CAND2O75155 1236 aa-1.73□□□□□ -2.69
SNORA40.16-201ENST00000517238 CLN5O75503 358 aa-1.73□□□□□ -2.69
SNORA40.16-201ENST00000517238 CCNKO75909 580 aa-1.73□□□□□ -2.69
SNORA40.16-201ENST00000517238 SRP72O76094 671 aaKnown RBP-1.73□□□□□ -2.69
SNORA40.16-201ENST00000517238 IL33O95760 270 aa-1.73□□□□□ -2.69
SNORA40.16-201ENST00000517238 NDST3O95803 873 aa-1.73□□□□□ -2.69
SNORA40.16-201ENST00000517238 POU1F1P28069 291 aa-1.73□□□□□ -2.69
SNORA40.16-201ENST00000517238 GABRB3P28472 473 aa-1.73□□□□□ -2.69
SNORA40.16-201ENST00000517238 SFTPDP35247 375 aa-1.73□□□□□ -2.69
SNORA40.16-201ENST00000517238 RBX1P62877 108 aa-1.73□□□□□ -2.69
SNORA40.16-201ENST00000517238 SLC7A9P82251 487 aa-1.73□□□□□ -2.69
SNORA40.16-201ENST00000517238 THOC5Q13769 683 aaKnown RBP-1.73□□□□□ -2.69
SNORA40.16-201ENST00000517238 DAG1Q14118 895 aa-1.73□□□□□ -2.69
SNORA40.16-201ENST00000517238 ELAVL3Q14576 367 aaKnown RBP-1.73□□□□□ -2.69
SNORA40.16-201ENST00000517238 TAF11Q15544 211 aa-1.73□□□□□ -2.69
SNORA40.16-201ENST00000517238 NFIL3Q16649 462 aa-1.73□□□□□ -2.69
SNORA40.16-201ENST00000517238 BTBD16Q32M84 506 aa-1.73□□□□□ -2.69
SNORA40.16-201ENST00000517238 DCAF4L1Q3SXM0 396 aa-1.73□□□□□ -2.69
SNORA40.16-201ENST00000517238 MDH1BQ5I0G3 518 aa-1.73□□□□□ -2.69
SNORA40.16-201ENST00000517238 TEX35Q5T0J7 233 aa-1.73□□□□□ -2.69
SNORA40.16-201ENST00000517238 GCNT6Q5T4J0 391 aa-1.73□□□□□ -2.69
SNORA40.16-201ENST00000517238 CCDC181Q5TID7 509 aa-1.73□□□□□ -2.69
SNORA40.16-201ENST00000517238 TCF24Q7RTU0 167 aa-1.73□□□□□ -2.69
SNORA40.16-201ENST00000517238 TRPM8Q7Z2W7 1104 aa-1.73□□□□□ -2.69
SNORA40.16-201ENST00000517238 FAM220AQ7Z4H9 259 aa-1.73□□□□□ -2.69
SNORA40.16-201ENST00000517238 DNAJB7Q7Z6W7 309 aaPredicted RBP-1.73□□□□□ -2.69
SNORA40.16-201ENST00000517238 CCDC13Q8IYE1 715 aa-1.73□□□□□ -2.69
SNORA40.16-201ENST00000517238 CFAP206Q8IYR0 622 aa-1.73□□□□□ -2.69
SNORA40.16-201ENST00000517238 RCOR2Q8IZ40 523 aa-1.73□□□□□ -2.69
SNORA40.16-201ENST00000517238 FBXW8Q8N3Y1 598 aa-1.73□□□□□ -2.69
SNORA40.16-201ENST00000517238 TCEANCQ8N8B7 351 aa-1.73□□□□□ -2.69
SNORA40.16-201ENST00000517238 TRIML1Q8N9V2 468 aa-1.73□□□□□ -2.69
SNORA40.16-201ENST00000517238 XXYLT1Q8NBI6 393 aa-1.73□□□□□ -2.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms