RNA–Protein interactions for RNA: ENST00000516009.1

SCARNA20.1-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 138 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.1-201ENST00000516009 PDE7BQ9NP56 450 aa7.24□□□□□ -1.25
SCARNA20.1-201ENST00000516009 GIMAP4Q9NUV9 329 aa7.24□□□□□ -1.25
SCARNA20.1-201ENST00000516009 TAS2R9Q9NYW1 312 aa7.24□□□□□ -1.25
SCARNA20.1-201ENST00000516009 TAS2R7Q9NYW3 318 aa7.24□□□□□ -1.25
SCARNA20.1-201ENST00000516009 STX18Q9P2W9 335 aaKnown RBP7.24□□□□□ -1.25
SCARNA20.1-201ENST00000516009 STOML1Q9UBI4 398 aa7.24□□□□□ -1.25
SCARNA20.1-201ENST00000516009 KLHL3Q9UH77 587 aa7.24□□□□□ -1.25
SCARNA20.1-201ENST00000516009 MAGEL2Q9UJ55 1249 aa7.24□□□□□ -1.25
SCARNA20.1-201ENST00000516009 GMEB2Q9UKD1 530 aa7.24□□□□□ -1.25
SCARNA20.1-201ENST00000516009 PLCL2Q9UPR0 1127 aa7.24□□□□□ -1.25
SCARNA20.1-201ENST00000516009 CORO2BQ9UQ03 480 aa7.24□□□□□ -1.25
SCARNA20.1-201ENST00000516009 ATG4BQ9Y4P1 393 aa7.24□□□□□ -1.25
SCARNA20.1-201ENST00000516009 PCDHB3Q9Y5E6 796 aa7.24□□□□□ -1.25
SCARNA20.1-201ENST00000516009 SLC22A7Q9Y694 548 aa7.24□□□□□ -1.25
SCARNA20.1-201ENST00000516009 SPACA6W5XKT8 324 aa7.24□□□□□ -1.25
SCARNA20.1-201ENST00000516009 ADAMTS20P59510 1910 aa7.23□□□□□ -1.25
SCARNA20.1-201ENST00000516009 IGHV5-51A0A0C4DH38 117 aa7.23□□□□□ -1.25
SCARNA20.1-201ENST00000516009 TCRBV3S1A0A5B6 114 aa7.23□□□□□ -1.25
SCARNA20.1-201ENST00000516009 ELOVL7A1L3X0 281 aa7.23□□□□□ -1.25
SCARNA20.1-201ENST00000516009 CPED1A4D0V7 1026 aa7.23□□□□□ -1.25
SCARNA20.1-201ENST00000516009 ARHGAP33O14559 1287 aa7.23□□□□□ -1.25
SCARNA20.1-201ENST00000516009 PROM1O43490 865 aa7.23□□□□□ -1.25
SCARNA20.1-201ENST00000516009 HCRTR1O43613 425 aa7.23□□□□□ -1.25
SCARNA20.1-201ENST00000516009 SIGLEC6O43699 453 aa7.23□□□□□ -1.25
SCARNA20.1-201ENST00000516009 GALR3O60755 368 aaPredicted RBP7.23□□□□□ -1.25
SCARNA20.1-201ENST00000516009 C9P02748 559 aa7.23□□□□□ -1.25
SCARNA20.1-201ENST00000516009 NCK1P16333 377 aa7.23□□□□□ -1.25
SCARNA20.1-201ENST00000516009 GPX2P18283 190 aa7.23□□□□□ -1.25
SCARNA20.1-201ENST00000516009 IL1RNP18510 177 aa7.23□□□□□ -1.25
SCARNA20.1-201ENST00000516009 CPN2P22792 545 aa7.23□□□□□ -1.25
SCARNA20.1-201ENST00000516009 NTSP30990 170 aa7.23□□□□□ -1.25
SCARNA20.1-201ENST00000516009 TLX1P31314 330 aaPredicted RBP7.23□□□□□ -1.25
SCARNA20.1-201ENST00000516009 SOAT1P35610 550 aa7.23□□□□□ -1.25
SCARNA20.1-201ENST00000516009 SOX11P35716 441 aa7.23□□□□□ -1.25
SCARNA20.1-201ENST00000516009 CHI3L1P36222 383 aaPredicted RBP7.23□□□□□ -1.25
SCARNA20.1-201ENST00000516009 FRKP42685 505 aaPredicted RBP7.23□□□□□ -1.25
SCARNA20.1-201ENST00000516009 MANFP55145 182 aaKnown RBP7.23□□□□□ -1.25
SCARNA20.1-201ENST00000516009 PCBP4P57723 403 aaKnown RBP7.23□□□□□ -1.25
SCARNA20.1-201ENST00000516009 SESN3P58005 492 aa7.23□□□□□ -1.25
SCARNA20.1-201ENST00000516009 SKP1P63208 163 aa7.23□□□□□ -1.25
SCARNA20.1-201ENST00000516009 TNFRSF17Q02223 184 aa7.23□□□□□ -1.25
SCARNA20.1-201ENST00000516009 GAB1Q13480 694 aa7.23□□□□□ -1.25
SCARNA20.1-201ENST00000516009 MLC1Q15049 377 aa7.23□□□□□ -1.25
SCARNA20.1-201ENST00000516009 LPAL2Q16609 132 aa7.23□□□□□ -1.25
SCARNA20.1-201ENST00000516009 NDUFA9Q16795 377 aa7.23□□□□□ -1.25
SCARNA20.1-201ENST00000516009 CYP51A1Q16850 503 aa7.23□□□□□ -1.25
SCARNA20.1-201ENST00000516009 PRTGQ2VWP7 1150 aa7.23□□□□□ -1.25
SCARNA20.1-201ENST00000516009 MTX3Q5HYI7 312 aa7.23□□□□□ -1.25
SCARNA20.1-201ENST00000516009 TCTE1Q5JU00 501 aa7.23□□□□□ -1.25
SCARNA20.1-201ENST00000516009 C18orf63Q68DL7 685 aa7.23□□□□□ -1.25
SCARNA20.1-201ENST00000516009 GLYATQ6IB77 296 aa7.23□□□□□ -1.25
SCARNA20.1-201ENST00000516009 SLC48A1Q6P1K1 146 aa7.23□□□□□ -1.25
SCARNA20.1-201ENST00000516009 ERICH5Q6P6B1 374 aa7.23□□□□□ -1.25
SCARNA20.1-201ENST00000516009 WDR74Q6RFH5 385 aaPredicted RBP7.23□□□□□ -1.25
SCARNA20.1-201ENST00000516009 ANGPTL8Q6UXH0 198 aa7.23□□□□□ -1.25
SCARNA20.1-201ENST00000516009 USP53Q70EK8 1073 aa7.23□□□□□ -1.25
SCARNA20.1-201ENST00000516009 SPRED1Q7Z699 444 aa7.23□□□□□ -1.25
SCARNA20.1-201ENST00000516009 SERPINA11Q86U17 422 aa7.23□□□□□ -1.25
SCARNA20.1-201ENST00000516009 CALHM3Q86XJ0 350 aa7.23□□□□□ -1.25
SCARNA20.1-201ENST00000516009 SPPL2CQ8IUH8 684 aa7.23□□□□□ -1.25
SCARNA20.1-201ENST00000516009 MICU2Q8IYU8 434 aa7.23□□□□□ -1.25
SCARNA20.1-201ENST00000516009 DTWD1Q8N5C7 304 aa7.23□□□□□ -1.25
SCARNA20.1-201ENST00000516009 EID2Q8N6I1 236 aa7.23□□□□□ -1.25
SCARNA20.1-201ENST00000516009 FAM181AQ8N9Y4 354 aa7.23□□□□□ -1.25
SCARNA20.1-201ENST00000516009 GOLM1Q8NBJ4 401 aa7.23□□□□□ -1.25
SCARNA20.1-201ENST00000516009 ZFP28Q8NHY6 868 aa7.23□□□□□ -1.25
SCARNA20.1-201ENST00000516009 PNPT1Q8TCS8 783 aaKnown RBP7.23□□□□□ -1.25
SCARNA20.1-201ENST00000516009 ZFP90Q8TF47 636 aa7.23□□□□□ -1.25
SCARNA20.1-201ENST00000516009 N4BP2L2Q92802 583 aaPredicted RBP7.23□□□□□ -1.25
SCARNA20.1-201ENST00000516009 REXO5Q96IC2 774 aaKnown RBP7.23□□□□□ -1.25
SCARNA20.1-201ENST00000516009 LOXL4Q96JB6 756 aa7.23□□□□□ -1.25
SCARNA20.1-201ENST00000516009 NSMCE2Q96MF7 247 aa7.23□□□□□ -1.25
SCARNA20.1-201ENST00000516009 SLC35A5Q9BS91 424 aa7.23□□□□□ -1.25
SCARNA20.1-201ENST00000516009 EFHD1Q9BUP0 239 aa7.23□□□□□ -1.25
SCARNA20.1-201ENST00000516009 SPATA9Q9BWV2 254 aa7.23□□□□□ -1.25
SCARNA20.1-201ENST00000516009 GTPBP2Q9BX10 602 aaKnown RBP7.23□□□□□ -1.25
SCARNA20.1-201ENST00000516009 RAD21L1Q9H4I0 556 aa7.23□□□□□ -1.25
SCARNA20.1-201ENST00000516009 ANKHQ9HCJ1 492 aa7.23□□□□□ -1.25
SCARNA20.1-201ENST00000516009 LYRM4Q9HD34 91 aa7.23□□□□□ -1.25
SCARNA20.1-201ENST00000516009 NEUROD4Q9HD90 331 aa7.23□□□□□ -1.25
SCARNA20.1-201ENST00000516009 SLC35C2Q9NQQ7 365 aa7.23□□□□□ -1.25
SCARNA20.1-201ENST00000516009 STARD5Q9NSY2 213 aa7.23□□□□□ -1.25
SCARNA20.1-201ENST00000516009 ACSS1Q9NUB1 689 aaPredicted RBP7.23□□□□□ -1.25
SCARNA20.1-201ENST00000516009 DNAAF2Q9NVR5 837 aaKnown RBP7.23□□□□□ -1.25
SCARNA20.1-201ENST00000516009 IRAK4Q9NWZ3 460 aa7.23□□□□□ -1.25
SCARNA20.1-201ENST00000516009 MS4A12Q9NXJ0 267 aa7.23□□□□□ -1.25
SCARNA20.1-201ENST00000516009 C5AR2Q9P296 337 aa7.23□□□□□ -1.25
SCARNA20.1-201ENST00000516009 UTS2RQ9UKP6 389 aa7.23□□□□□ -1.25
SCARNA20.1-201ENST00000516009 PSME2Q9UL46 239 aa7.23□□□□□ -1.25
SCARNA20.1-201ENST00000516009 RAB23Q9ULC3 237 aa7.23□□□□□ -1.25
SCARNA20.1-201ENST00000516009 USP22Q9UPT9 525 aa7.23□□□□□ -1.25
SCARNA20.1-201ENST00000516009 ERVK-11Q9UQG0 969 aa7.23□□□□□ -1.25
SCARNA20.1-201ENST00000516009 ENTPD4Q9Y227 616 aa7.23□□□□□ -1.25
SCARNA20.1-201ENST00000516009 MRPS2Q9Y399 296 aaKnown RBP7.23□□□□□ -1.25
SCARNA20.1-201ENST00000516009 GMEB1Q9Y692 573 aa7.23□□□□□ -1.25
SCARNA20.1-201ENST00000516009 MN1Q10571 1320 aaPredicted RBP7.23□□□□□ -1.25
SCARNA20.1-201ENST00000516009 SPTBP11277 2137 aa7.22□□□□□ -1.25
SCARNA20.1-201ENST00000516009 USP34Q70CQ2 3546 aa7.22□□□□□ -1.25
SCARNA20.1-201ENST00000516009 TTC28Q96AY4 2481 aa7.22□□□□□ -1.25
SCARNA20.1-201ENST00000516009 MUC3AQ02505 3323 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms