RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 KLHL41O60662 606 aa19.79■□□□□ 0.76
LSM6-207ENST00000515311 FHP07954 510 aa19.79■□□□□ 0.76
LSM6-207ENST00000515311 RAB40ALP0C0E4 278 aa19.79■□□□□ 0.76
LSM6-207ENST00000515311 NR2F6P10588 404 aa19.79■□□□□ 0.76
LSM6-207ENST00000515311 LIPCP11150 499 aa19.79■□□□□ 0.76
LSM6-207ENST00000515311 DRD2P14416 443 aa19.79■□□□□ 0.76
LSM6-207ENST00000515311 CPN2P22792 545 aa19.79■□□□□ 0.76
LSM6-207ENST00000515311 TLX1P31314 330 aaPredicted RBP19.79■□□□□ 0.76
LSM6-207ENST00000515311 OCA2Q04671 838 aa19.79■□□□□ 0.76
LSM6-207ENST00000515311 NCF4Q15080 339 aa19.79■□□□□ 0.76
LSM6-207ENST00000515311 GSTA3Q16772 222 aa19.79■□□□□ 0.76
LSM6-207ENST00000515311 NDUFAF5Q5TEU4 345 aa19.79■□□□□ 0.76
LSM6-207ENST00000515311 FAM199XQ6PEV8 388 aaPredicted RBP19.79■□□□□ 0.76
LSM6-207ENST00000515311 ZC3H7AQ8IWR0 971 aaKnown RBP19.79■□□□□ 0.76
LSM6-207ENST00000515311 CACNA2D3Q8IZS8 1091 aa19.79■□□□□ 0.76
LSM6-207ENST00000515311 TMEM132CQ8N3T6 1108 aa19.79■□□□□ 0.76
LSM6-207ENST00000515311 YIPF2Q9BWQ6 316 aa19.79■□□□□ 0.76
LSM6-207ENST00000515311 FAIM2Q9BWQ8 316 aa19.79■□□□□ 0.76
LSM6-207ENST00000515311 BRINP2Q9C0B6 783 aa19.79■□□□□ 0.76
LSM6-207ENST00000515311 ANGPTL2Q9UKU9 493 aa19.79■□□□□ 0.76
LSM6-207ENST00000515311 MRPS33Q9Y291 106 aaKnown RBP19.79■□□□□ 0.76
LSM6-207ENST00000515311 VSTM2BA6NLU5 285 aa19.78■□□□□ 0.76
LSM6-207ENST00000515311 C21orf140B9A014 251 aa19.78■□□□□ 0.76
LSM6-207ENST00000515311 BMP10O95393 424 aa19.78■□□□□ 0.76
LSM6-207ENST00000515311 AIFM1O95831 613 aa19.78■□□□□ 0.76
LSM6-207ENST00000515311 IL3P08700 152 aa19.78■□□□□ 0.76
LSM6-207ENST00000515311 G6PDP11413 515 aa19.78■□□□□ 0.76
LSM6-207ENST00000515311 JAK1P23458 1154 aa19.78■□□□□ 0.76
LSM6-207ENST00000515311 C21orf58P58505 322 aa19.78■□□□□ 0.76
LSM6-207ENST00000515311 PTGR1Q14914 329 aa19.78■□□□□ 0.76
LSM6-207ENST00000515311 HEPACAMQ14CZ8 416 aa19.78■□□□□ 0.76
LSM6-207ENST00000515311 NKG7Q16617 165 aa19.78■□□□□ 0.76
LSM6-207ENST00000515311 TMEM198Q66K66 360 aa19.78■□□□□ 0.76
LSM6-207ENST00000515311 FAM71E1Q6IPT2 247 aa19.78■□□□□ 0.76
LSM6-207ENST00000515311 ERMP1Q7Z2K6 904 aa19.78■□□□□ 0.76
LSM6-207ENST00000515311 ZNF595Q8IYB9 648 aa19.78■□□□□ 0.76
LSM6-207ENST00000515311 STT3BQ8TCJ2 826 aa19.78■□□□□ 0.76
LSM6-207ENST00000515311 CT55Q8WUE5 264 aa19.78■□□□□ 0.76
LSM6-207ENST00000515311 NKD1Q969G9 470 aa19.78■□□□□ 0.76
LSM6-207ENST00000515311 TSSK3Q96PN8 268 aa19.78■□□□□ 0.76
LSM6-207ENST00000515311 CSF3RQ99062 836 aa19.78■□□□□ 0.76
LSM6-207ENST00000515311 WDR41Q9HAD4 459 aa19.78■□□□□ 0.76
LSM6-207ENST00000515311 LANCL2Q9NS86 450 aa19.78■□□□□ 0.76
LSM6-207ENST00000515311 DKK4Q9UBT3 224 aa19.78■□□□□ 0.76
LSM6-207ENST00000515311 BAIAP2L1Q9UHR4 511 aa19.78■□□□□ 0.76
LSM6-207ENST00000515311 MAPRE3Q9UPY8 281 aa19.78■□□□□ 0.76
LSM6-207ENST00000515311 GPR45Q9Y5Y3 372 aa19.78■□□□□ 0.76
LSM6-207ENST00000515311 C1orf226A1L170 272 aa19.77■□□□□ 0.76
LSM6-207ENST00000515311 PRMT3O60678 531 aa19.77■□□□□ 0.76
LSM6-207ENST00000515311 CYC1P08574 325 aa19.77■□□□□ 0.76
LSM6-207ENST00000515311 ZGLP1P0C6A0 271 aa19.77■□□□□ 0.76
LSM6-207ENST00000515311 PRPS1L1P21108 318 aa19.77■□□□□ 0.76
LSM6-207ENST00000515311 MRPL19P49406 292 aaKnown RBP19.77■□□□□ 0.76
LSM6-207ENST00000515311 SF3A3Q12874 501 aaKnown RBP eCLIP19.77■□□□□ 0.76
LSM6-207ENST00000515311 MLIPQ5VWP3 458 aa19.77■□□□□ 0.76
LSM6-207ENST00000515311 SHISA5Q8N114 240 aa19.77■□□□□ 0.76
LSM6-207ENST00000515311 FAM47BQ8NA70 645 aa19.77■□□□□ 0.76
LSM6-207ENST00000515311 MIEF2Q96C03 454 aa19.77■□□□□ 0.76
LSM6-207ENST00000515311 ZNF764Q96H86 408 aaPredicted RBP19.77■□□□□ 0.76
LSM6-207ENST00000515311 EGLN2Q96KS0 407 aa19.77■□□□□ 0.76
LSM6-207ENST00000515311 GPR87Q9BY21 358 aa19.77■□□□□ 0.76
LSM6-207ENST00000515311 RABEP2Q9H5N1 569 aa19.77■□□□□ 0.76
LSM6-207ENST00000515311 RPF2Q9H7B2 306 aaKnown RBP19.77■□□□□ 0.76
LSM6-207ENST00000515311 SDR39U1Q9NRG7 319 aaPredicted RBP19.77■□□□□ 0.76
LSM6-207ENST00000515311 EHD3Q9NZN3 535 aa19.77■□□□□ 0.76
LSM6-207ENST00000515311 PADI2Q9Y2J8 665 aa19.77■□□□□ 0.76
LSM6-207ENST00000515311 PCDHA9Q9Y5H5 950 aa19.77■□□□□ 0.76
LSM6-207ENST00000515311 FAM227AF5H4B4 570 aa19.76■□□□□ 0.75
LSM6-207ENST00000515311 CLDN4O14493 209 aa19.76■□□□□ 0.75
LSM6-207ENST00000515311 TERTO14746 1132 aaKnown RBP19.76■□□□□ 0.75
LSM6-207ENST00000515311 ANKRD28O15084 1053 aa19.76■□□□□ 0.75
LSM6-207ENST00000515311 TCN2P20062 427 aa19.76■□□□□ 0.75
LSM6-207ENST00000515311 DDCP20711 480 aa19.76■□□□□ 0.75
LSM6-207ENST00000515311 ATP4BP51164 291 aa19.76■□□□□ 0.75
LSM6-207ENST00000515311 CLDN8P56748 225 aa19.76■□□□□ 0.75
LSM6-207ENST00000515311 PCBP4P57723 403 aaKnown RBP19.76■□□□□ 0.75
LSM6-207ENST00000515311 C2orf80Q0P641 193 aa19.76■□□□□ 0.75
LSM6-207ENST00000515311 PDCD4Q53EL6 469 aaKnown RBP19.76■□□□□ 0.75
LSM6-207ENST00000515311 VWA2Q5GFL6 755 aa19.76■□□□□ 0.75
LSM6-207ENST00000515311 GKAP1Q5VSY0 366 aaPredicted RBP19.76■□□□□ 0.75
LSM6-207ENST00000515311 C18orf63Q68DL7 685 aa19.76■□□□□ 0.75
LSM6-207ENST00000515311 OR52E8Q6IFG1 317 aa19.76■□□□□ 0.75
LSM6-207ENST00000515311 CLHC1Q8NHS4 586 aa19.76■□□□□ 0.75
LSM6-207ENST00000515311 CDC26Q8NHZ8 85 aa19.76■□□□□ 0.75
LSM6-207ENST00000515311 STARD8Q92502 1023 aa19.76■□□□□ 0.75
LSM6-207ENST00000515311 TANKQ92844 425 aa19.76■□□□□ 0.75
LSM6-207ENST00000515311 MTERF3Q96E29 417 aa19.76■□□□□ 0.75
LSM6-207ENST00000515311 CATSPER2Q96P56 530 aa19.76■□□□□ 0.75
LSM6-207ENST00000515311 SPSB2Q99619 263 aa19.76■□□□□ 0.75
LSM6-207ENST00000515311 RBCK1Q9BYM8 510 aa19.76■□□□□ 0.75
LSM6-207ENST00000515311 MRGBPQ9NV56 204 aa19.76■□□□□ 0.75
LSM6-207ENST00000515311 CROTQ9UKG9 612 aa19.76■□□□□ 0.75
LSM6-207ENST00000515311 MMACHCQ9Y4U1 282 aa19.76■□□□□ 0.75
LSM6-207ENST00000515311 CNOT3O75175 753 aaKnown RBP19.75■□□□□ 0.75
LSM6-207ENST00000515311 PPP2R1BP30154 601 aa19.75■□□□□ 0.75
LSM6-207ENST00000515311 HPCAL1P37235 193 aa19.75■□□□□ 0.75
LSM6-207ENST00000515311 RPL3P39023 403 aaKnown RBP19.75■□□□□ 0.75
LSM6-207ENST00000515311 HNRNPFP52597 415 aaKnown RBP19.75■□□□□ 0.75
LSM6-207ENST00000515311 HSD17B7P56937 341 aa19.75■□□□□ 0.75
LSM6-207ENST00000515311 STX1BP61266 288 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms