RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 NBEAL1Q6ZS30 2694 aa10.08□□□□□ -0.8
DDX41-216ENST00000513562 ZNF407Q9C0G0 2248 aa10.07□□□□□ -0.8
DDX41-216ENST00000513562 CTAGE9A4FU28 777 aa10.07□□□□□ -0.8
DDX41-216ENST00000513562 EEF1E1-BLOC1S5C9J1V9 151 aa10.07□□□□□ -0.8
DDX41-216ENST00000513562 CLDN4O14493 209 aa10.07□□□□□ -0.8
DDX41-216ENST00000513562 EEF1E1O43324 174 aaKnown RBP10.07□□□□□ -0.8
DDX41-216ENST00000513562 NRDCO43847 1150 aa10.07□□□□□ -0.8
DDX41-216ENST00000513562 SERPINA6P08185 405 aa10.07□□□□□ -0.8
DDX41-216ENST00000513562 RNF4P78317 190 aa10.07□□□□□ -0.8
DDX41-216ENST00000513562 BASP1P80723 227 aaKnown RBP10.07□□□□□ -0.8
DDX41-216ENST00000513562 CCZ1BP86790 482 aa10.07□□□□□ -0.8
DDX41-216ENST00000513562 CCZ1P86791 482 aaPredicted RBP10.07□□□□□ -0.8
DDX41-216ENST00000513562 CRYZQ08257 329 aaKnown RBP10.07□□□□□ -0.8
DDX41-216ENST00000513562 RUNX2Q13950 521 aa10.07□□□□□ -0.8
DDX41-216ENST00000513562 SIX1Q15475 284 aaPredicted RBP10.07□□□□□ -0.8
DDX41-216ENST00000513562 NSUN5P2Q63ZY6 315 aa10.07□□□□□ -0.8
DDX41-216ENST00000513562 DUPD1Q68J44 220 aa10.07□□□□□ -0.8
DDX41-216ENST00000513562 PHC2Q8IXK0 858 aa10.07□□□□□ -0.8
DDX41-216ENST00000513562 PIAS4Q8N2W9 510 aaPredicted RBP10.07□□□□□ -0.8
DDX41-216ENST00000513562 LIX1Q8N485 282 aa10.07□□□□□ -0.8
DDX41-216ENST00000513562 ZNF321PQ8N8H1 164 aa10.07□□□□□ -0.8
DDX41-216ENST00000513562 OR14A16Q8NHC5 309 aa10.07□□□□□ -0.8
DDX41-216ENST00000513562 PAQR8Q8TEZ7 354 aa10.07□□□□□ -0.8
DDX41-216ENST00000513562 PTPMT1Q8WUK0 201 aaPredicted RBP10.07□□□□□ -0.8
DDX41-216ENST00000513562 EEF1AKMT1Q8WVE0 214 aa10.07□□□□□ -0.8
DDX41-216ENST00000513562 SLC5A11Q8WWX8 675 aa10.07□□□□□ -0.8
DDX41-216ENST00000513562 DAZLQ92904 295 aaKnown RBP10.07□□□□□ -0.8
DDX41-216ENST00000513562 NEIL2Q969S2 332 aa10.07□□□□□ -0.8
DDX41-216ENST00000513562 ISL2Q96A47 359 aa10.07□□□□□ -0.8
DDX41-216ENST00000513562 HSPBAP1Q96EW2 488 aa10.07□□□□□ -0.8
DDX41-216ENST00000513562 WDR83Q9BRX9 315 aaKnown RBP10.07□□□□□ -0.8
DDX41-216ENST00000513562 NPLQ9BXD5 320 aaPredicted RBP10.07□□□□□ -0.8
DDX41-216ENST00000513562 PRDM14Q9GZV8 571 aa10.07□□□□□ -0.8
DDX41-216ENST00000513562 BOKQ9UMX3 212 aaPredicted RBP10.07□□□□□ -0.8
DDX41-216ENST00000513562 REXO2Q9Y3B8 237 aaKnown RBP10.07□□□□□ -0.8
DDX41-216ENST00000513562 CUBNO60494 3623 aa10.07□□□□□ -0.8
DDX41-216ENST00000513562 SH3D21A4FU49 640 aa10.06□□□□□ -0.8
DDX41-216ENST00000513562 MBD3L4A6NDZ8 208 aaPredicted RBP10.06□□□□□ -0.8
DDX41-216ENST00000513562 MBD3L3A6NE82 208 aaPredicted RBP10.06□□□□□ -0.8
DDX41-216ENST00000513562 MBD3L5A6NJ08 208 aaPredicted RBP10.06□□□□□ -0.8
DDX41-216ENST00000513562 RNF212BA8MTL3 300 aa10.06□□□□□ -0.8
DDX41-216ENST00000513562 CES2O00748 559 aa10.06□□□□□ -0.8
DDX41-216ENST00000513562 FTCDO95954 541 aa10.06□□□□□ -0.8
DDX41-216ENST00000513562 IL18BPO95998 194 aa10.06□□□□□ -0.8
DDX41-216ENST00000513562 BMP7P18075 431 aa10.06□□□□□ -0.8
DDX41-216ENST00000513562 TPSB2P20231 275 aa10.06□□□□□ -0.8
DDX41-216ENST00000513562 CTSSP25774 331 aa10.06□□□□□ -0.8
DDX41-216ENST00000513562 OPRM1P35372 400 aa10.06□□□□□ -0.8
DDX41-216ENST00000513562 SLC1A2P43004 574 aa10.06□□□□□ -0.8
DDX41-216ENST00000513562 TRPC1P48995 793 aa10.06□□□□□ -0.8
DDX41-216ENST00000513562 RAB38P57729 211 aa10.06□□□□□ -0.8
DDX41-216ENST00000513562 KCNJ2P63252 427 aa10.06□□□□□ -0.8
DDX41-216ENST00000513562 BTN3A2P78410 334 aa10.06□□□□□ -0.8
DDX41-216ENST00000513562 TBL3Q12788 808 aaKnown RBP10.06□□□□□ -0.8
DDX41-216ENST00000513562 DUSP8Q13202 625 aa10.06□□□□□ -0.8
DDX41-216ENST00000513562 SNX1Q13596 522 aa10.06□□□□□ -0.8
DDX41-216ENST00000513562 CSHL1Q14406 222 aa10.06□□□□□ -0.8
DDX41-216ENST00000513562 TPSAB1Q15661 275 aa10.06□□□□□ -0.8
DDX41-216ENST00000513562 MPEG1Q2M385 716 aa10.06□□□□□ -0.8
DDX41-216ENST00000513562 ZNF791Q3KP31 576 aaPredicted RBP10.06□□□□□ -0.8
DDX41-216ENST00000513562 TOR1AIP1Q5JTV8 583 aa10.06□□□□□ -0.8
DDX41-216ENST00000513562 SLC22A10Q63ZE4 541 aa10.06□□□□□ -0.8
DDX41-216ENST00000513562 CLNKQ7Z7G1 428 aa10.06□□□□□ -0.8
DDX41-216ENST00000513562 PALM2Q8IXS6 379 aa10.06□□□□□ -0.8
DDX41-216ENST00000513562 ZNF595Q8IYB9 648 aa10.06□□□□□ -0.8
DDX41-216ENST00000513562 FAM47BQ8NA70 645 aa10.06□□□□□ -0.8
DDX41-216ENST00000513562 OR5L2Q8NGL0 311 aa10.06□□□□□ -0.8
DDX41-216ENST00000513562 MBD3L2Q8NHZ7 208 aaPredicted RBP10.06□□□□□ -0.8
DDX41-216ENST00000513562 GAL3ST3Q96A11 431 aa10.06□□□□□ -0.8
DDX41-216ENST00000513562 HES6Q96HZ4 224 aa10.06□□□□□ -0.8
DDX41-216ENST00000513562 TIMP4Q99727 224 aa10.06□□□□□ -0.8
DDX41-216ENST00000513562 TSGA10Q9BZW7 698 aa10.06□□□□□ -0.8
DDX41-216ENST00000513562 OR8D2Q9GZM6 311 aa10.06□□□□□ -0.8
DDX41-216ENST00000513562 EPB41L4BQ9H329 900 aa10.06□□□□□ -0.8
DDX41-216ENST00000513562 PROK2Q9HC23 129 aa10.06□□□□□ -0.8
DDX41-216ENST00000513562 TRMT6Q9UJA5 497 aaKnown RBP10.06□□□□□ -0.8
DDX41-216ENST00000513562 MRPS33Q9Y291 106 aaKnown RBP10.06□□□□□ -0.8
DDX41-216ENST00000513562 EPN1Q9Y6I3 576 aaPredicted RBP10.06□□□□□ -0.8
DDX41-216ENST00000513562 C15orf38-AP3S2A0A0A6YYH1 394 aa10.05□□□□□ -0.8
DDX41-216ENST00000513562 TCRBV7S3A2A0A539 114 aa10.05□□□□□ -0.8
DDX41-216ENST00000513562 CD8B2A6NJW9 211 aa10.05□□□□□ -0.8
DDX41-216ENST00000513562 CYR61O00622 381 aa10.05□□□□□ -0.8
DDX41-216ENST00000513562 IFNA16P05015 189 aa10.05□□□□□ -0.8
DDX41-216ENST00000513562 HIST1H2AGP0C0S8 130 aaPredicted RBP10.05□□□□□ -0.8
DDX41-216ENST00000513562 HIST1H2ADP20671 130 aa10.05□□□□□ -0.8
DDX41-216ENST00000513562 RGS4P49798 205 aa10.05□□□□□ -0.8
DDX41-216ENST00000513562 AGFG1P52594 562 aaKnown RBP10.05□□□□□ -0.8
DDX41-216ENST00000513562 AP1S2P56377 157 aa10.05□□□□□ -0.8
DDX41-216ENST00000513562 STXBP1P61764 594 aaKnown RBP10.05□□□□□ -0.8
DDX41-216ENST00000513562 CDK16Q00536 496 aa10.05□□□□□ -0.8
DDX41-216ENST00000513562 TIAL1Q01085 375 aaKnown RBP eCLIP10.05□□□□□ -0.8
DDX41-216ENST00000513562 CBLBQ13191 982 aa10.05□□□□□ -0.8
DDX41-216ENST00000513562 THOC5Q13769 683 aaKnown RBP10.05□□□□□ -0.8
DDX41-216ENST00000513562 DHX34Q14147 1143 aaKnown RBP10.05□□□□□ -0.8
DDX41-216ENST00000513562 SF3B4Q15427 424 aaKnown RBP eCLIP10.05□□□□□ -0.8
DDX41-216ENST00000513562 PIGGQ5H8A4 983 aa10.05□□□□□ -0.8
DDX41-216ENST00000513562 PRAMEF20Q5VT98 475 aa10.05□□□□□ -0.8
DDX41-216ENST00000513562 LYPD8Q6UX82 237 aa10.05□□□□□ -0.8
DDX41-216ENST00000513562 C4orf22Q6V702 233 aa10.05□□□□□ -0.8
DDX41-216ENST00000513562 PM20D2Q8IYS1 436 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms