RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 GPR143P51810 404 aa5.93□□□□□ -1.46
TRAPPC11-209ENST00000512476 NUDT6P53370 316 aa5.93□□□□□ -1.46
TRAPPC11-209ENST00000512476 CDH6P55285 790 aa5.93□□□□□ -1.46
TRAPPC11-209ENST00000512476 PJVKQ0ZLH3 352 aa5.93□□□□□ -1.46
TRAPPC11-209ENST00000512476 PDK2Q15119 407 aa5.93□□□□□ -1.46
TRAPPC11-209ENST00000512476 LACTB2Q53H82 288 aaPredicted RBP5.93□□□□□ -1.46
TRAPPC11-209ENST00000512476 ACTBL2Q562R1 376 aa5.93□□□□□ -1.46
TRAPPC11-209ENST00000512476 RABL3Q5HYI8 236 aa5.93□□□□□ -1.46
TRAPPC11-209ENST00000512476 EOGTQ5NDL2 527 aa5.93□□□□□ -1.46
TRAPPC11-209ENST00000512476 FIGLAQ6QHK4 219 aa5.93□□□□□ -1.46
TRAPPC11-209ENST00000512476 PRSS58Q8IYP2 241 aa5.93□□□□□ -1.46
TRAPPC11-209ENST00000512476 SLC38A6Q8IZM9 456 aa5.93□□□□□ -1.46
TRAPPC11-209ENST00000512476 SRFBP1Q8NEF9 429 aaKnown RBP5.93□□□□□ -1.46
TRAPPC11-209ENST00000512476 MARCH1Q8TCQ1 289 aa5.93□□□□□ -1.46
TRAPPC11-209ENST00000512476 IGSF8Q969P0 613 aa5.93□□□□□ -1.46
TRAPPC11-209ENST00000512476 AJUBAQ96IF1 538 aa5.93□□□□□ -1.46
TRAPPC11-209ENST00000512476 DCAF5Q96JK2 942 aa5.93□□□□□ -1.46
TRAPPC11-209ENST00000512476 PARPBPQ9NWS1 579 aa5.93□□□□□ -1.46
TRAPPC11-209ENST00000512476 ELOVL2Q9NXB9 296 aa5.93□□□□□ -1.46
TRAPPC11-209ENST00000512476 ADAM22Q9P0K1 906 aa5.93□□□□□ -1.46
TRAPPC11-209ENST00000512476 C3orf18Q9UK00 162 aa5.93□□□□□ -1.46
TRAPPC11-209ENST00000512476 PCDH11XQ9BZA7 1347 aa5.93□□□□□ -1.46
TRAPPC11-209ENST00000512476 PCDH11YQ9BZA8 1340 aa5.93□□□□□ -1.46
TRAPPC11-209ENST00000512476 RGS12O14924 1447 aa5.93□□□□□ -1.46
TRAPPC11-209ENST00000512476 FAM240BA0A1B0GVZ2 78 aa5.93□□□□□ -1.46
TRAPPC11-209ENST00000512476 GSTTP1A0A1W2PQM5 241 aa5.93□□□□□ -1.46
TRAPPC11-209ENST00000512476 TMEM247A6NEH6 219 aa5.93□□□□□ -1.46
TRAPPC11-209ENST00000512476 CBY3A6NI87 242 aa5.93□□□□□ -1.46
TRAPPC11-209ENST00000512476 E9PQ18 207 aa5.93□□□□□ -1.46
TRAPPC11-209ENST00000512476 PLPP2O43688 288 aa5.93□□□□□ -1.46
TRAPPC11-209ENST00000512476 CNTN5O94779 1100 aa5.93□□□□□ -1.46
TRAPPC11-209ENST00000512476 HAUS5O94927 633 aa5.93□□□□□ -1.46
TRAPPC11-209ENST00000512476 LYPLA2O95372 231 aa5.93□□□□□ -1.46
TRAPPC11-209ENST00000512476 IL18BPO95998 194 aa5.93□□□□□ -1.46
TRAPPC11-209ENST00000512476 ANXA4P09525 319 aaPredicted RBP5.93□□□□□ -1.46
TRAPPC11-209ENST00000512476 HOXB7P09629 217 aa5.93□□□□□ -1.46
TRAPPC11-209ENST00000512476 ATF6P18850 670 aa5.93□□□□□ -1.46
TRAPPC11-209ENST00000512476 KIR3DL2P43630 455 aa5.93□□□□□ -1.46
TRAPPC11-209ENST00000512476 VAV2P52735 878 aa5.93□□□□□ -1.46
TRAPPC11-209ENST00000512476 MTCP1P56278 107 aa5.93□□□□□ -1.46
TRAPPC11-209ENST00000512476 PRPS1P60891 318 aa5.93□□□□□ -1.46
TRAPPC11-209ENST00000512476 RAP2BP61225 183 aa5.93□□□□□ -1.46
TRAPPC11-209ENST00000512476 PHEXP78562 749 aa5.93□□□□□ -1.46
TRAPPC11-209ENST00000512476 SNTA1Q13424 505 aa5.93□□□□□ -1.46
TRAPPC11-209ENST00000512476 DGCR6Q14129 220 aa5.93□□□□□ -1.46
TRAPPC11-209ENST00000512476 KNOP1Q1ED39 458 aaKnown RBP5.93□□□□□ -1.46
TRAPPC11-209ENST00000512476 FAM47AQ5JRC9 791 aa5.93□□□□□ -1.46
TRAPPC11-209ENST00000512476 CEP85LQ5SZL2 805 aa5.93□□□□□ -1.46
TRAPPC11-209ENST00000512476 ZNF618Q5T7W0 954 aa5.93□□□□□ -1.46
TRAPPC11-209ENST00000512476 KHDRBS2Q5VWX1 349 aaKnown RBP5.93□□□□□ -1.46
TRAPPC11-209ENST00000512476 Q6ZNB5 142 aa5.93□□□□□ -1.46
TRAPPC11-209ENST00000512476 MEPCEQ7L2J0 689 aaKnown RBP5.93□□□□□ -1.46
TRAPPC11-209ENST00000512476 NRARPQ7Z6K4 114 aa5.93□□□□□ -1.46
TRAPPC11-209ENST00000512476 LHFPL4Q7Z7J7 247 aa5.93□□□□□ -1.46
TRAPPC11-209ENST00000512476 SLC35F3Q8IY50 421 aa5.93□□□□□ -1.46
TRAPPC11-209ENST00000512476 ZNF808Q8N4W9 903 aaPredicted RBP5.93□□□□□ -1.46
TRAPPC11-209ENST00000512476 AMER2Q8N7J2 671 aa5.93□□□□□ -1.46
TRAPPC11-209ENST00000512476 SDR9C7Q8NEX9 313 aa5.93□□□□□ -1.46
TRAPPC11-209ENST00000512476 P3H4Q92791 437 aa5.93□□□□□ -1.46
TRAPPC11-209ENST00000512476 FAR2Q96K12 515 aa5.93□□□□□ -1.46
TRAPPC11-209ENST00000512476 POLR3FQ9H1D9 316 aaPredicted RBP5.93□□□□□ -1.46
TRAPPC11-209ENST00000512476 PHPT1Q9NRX4 125 aaPredicted RBP5.93□□□□□ -1.46
TRAPPC11-209ENST00000512476 CLEC2DQ9UHP7 191 aa5.93□□□□□ -1.46
TRAPPC11-209ENST00000512476 FAF1Q9UNN5 650 aaPredicted RBP5.93□□□□□ -1.46
TRAPPC11-209ENST00000512476 PLLPQ9Y342 182 aa5.93□□□□□ -1.46
TRAPPC11-209ENST00000512476 LSM4Q9Y4Z0 139 aaKnown RBP5.93□□□□□ -1.46
TRAPPC11-209ENST00000512476 KLF2Q9Y5W3 355 aaPredicted RBP5.93□□□□□ -1.46
TRAPPC11-209ENST00000512476 CLIC4Q9Y696 253 aa5.93□□□□□ -1.46
TRAPPC11-209ENST00000512476 CAPN6Q9Y6Q1 641 aa5.93□□□□□ -1.46
TRAPPC11-209ENST00000512476 MN1Q10571 1320 aaPredicted RBP5.93□□□□□ -1.46
TRAPPC11-209ENST00000512476 DISP2A7MBM2 1401 aa5.93□□□□□ -1.46
TRAPPC11-209ENST00000512476 WDR91A4D1P6 747 aa5.92□□□□□ -1.46
TRAPPC11-209ENST00000512476 MARCH11A6NNE9 402 aa5.92□□□□□ -1.46
TRAPPC11-209ENST00000512476 BTBD19C9JJ37 291 aa5.92□□□□□ -1.46
TRAPPC11-209ENST00000512476 PRSS46E5RG02 174 aa5.92□□□□□ -1.46
TRAPPC11-209ENST00000512476 OR1F1O43749 312 aa5.92□□□□□ -1.46
TRAPPC11-209ENST00000512476 LPXNO60711 386 aa5.92□□□□□ -1.46
TRAPPC11-209ENST00000512476 FTH1P02794 183 aa5.92□□□□□ -1.46
TRAPPC11-209ENST00000512476 PTPRCP08575 1304 aa5.92□□□□□ -1.46
TRAPPC11-209ENST00000512476 SPP1P10451 314 aa5.92□□□□□ -1.46
TRAPPC11-209ENST00000512476 FGF5P12034 268 aa5.92□□□□□ -1.46
TRAPPC11-209ENST00000512476 ETS2P15036 469 aa5.92□□□□□ -1.46
TRAPPC11-209ENST00000512476 MSH3P20585 1137 aa5.92□□□□□ -1.46
TRAPPC11-209ENST00000512476 PRCPP42785 496 aa5.92□□□□□ -1.46
TRAPPC11-209ENST00000512476 FMO5P49326 533 aa5.92□□□□□ -1.46
TRAPPC11-209ENST00000512476 CCR8P51685 355 aa5.92□□□□□ -1.46
TRAPPC11-209ENST00000512476 CSNK1G2P78368 415 aa5.92□□□□□ -1.46
TRAPPC11-209ENST00000512476 PRR20EP86478 221 aa5.92□□□□□ -1.46
TRAPPC11-209ENST00000512476 PRR20CP86479 221 aa5.92□□□□□ -1.46
TRAPPC11-209ENST00000512476 PRR20DP86480 221 aa5.92□□□□□ -1.46
TRAPPC11-209ENST00000512476 PRR20BP86481 221 aa5.92□□□□□ -1.46
TRAPPC11-209ENST00000512476 PRR20AP86496 221 aa5.92□□□□□ -1.46
TRAPPC11-209ENST00000512476 PMPCAQ10713 525 aa5.92□□□□□ -1.46
TRAPPC11-209ENST00000512476 HEPACAMQ14CZ8 416 aa5.92□□□□□ -1.46
TRAPPC11-209ENST00000512476 CTU2Q2VPK5 515 aaKnown RBP5.92□□□□□ -1.46
TRAPPC11-209ENST00000512476 BSPRYQ5W0U4 402 aa5.92□□□□□ -1.46
TRAPPC11-209ENST00000512476 FAM171BQ6P995 826 aa5.92□□□□□ -1.46
TRAPPC11-209ENST00000512476 PLD3Q8IV08 490 aa5.92□□□□□ -1.46
TRAPPC11-209ENST00000512476 NAGSQ8N159 534 aa5.92□□□□□ -1.46
TRAPPC11-209ENST00000512476 THEM5Q8N1Q8 247 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms