RNA–Protein interactions for RNA: ENST00000512107.5

MATR3-238, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-238	ENST00000512107	PPP2R1B	P30154	601 aa		13.7	□□□□□ -0.22
MATR3-238	ENST00000512107	LSP1	P33241	339 aa		13.7	□□□□□ -0.22
MATR3-238	ENST00000512107	AQP5	P55064	265 aa		13.7	□□□□□ -0.22
MATR3-238	ENST00000512107	DIO3	P55073	304 aa		13.7	□□□□□ -0.22
MATR3-238	ENST00000512107	PCBP4	P57723	403 aa	Known RBP	13.7	□□□□□ -0.22
MATR3-238	ENST00000512107	GNGT1	P63211	74 aa		13.7	□□□□□ -0.22
MATR3-238	ENST00000512107	ACSM2A	Q08AH3	577 aa		13.7	□□□□□ -0.22
MATR3-238	ENST00000512107	ZNF750	Q32MQ0	723 aa		13.7	□□□□□ -0.22
MATR3-238	ENST00000512107	LSM12	Q3MHD2	195 aa	Known RBP	13.7	□□□□□ -0.22
MATR3-238	ENST00000512107	CCNYL2	Q5T2Q4	361 aa		13.7	□□□□□ -0.22
MATR3-238	ENST00000512107	ACSM2B	Q68CK6	577 aa		13.7	□□□□□ -0.22
MATR3-238	ENST00000512107	FAAH2	Q6GMR7	532 aa		13.7	□□□□□ -0.22
MATR3-238	ENST00000512107	DGAT2L6	Q6ZPD8	337 aa		13.7	□□□□□ -0.22
MATR3-238	ENST00000512107	CLNK	Q7Z7G1	428 aa		13.7	□□□□□ -0.22
MATR3-238	ENST00000512107	OR4N5	Q8IXE1	308 aa		13.7	□□□□□ -0.22
MATR3-238	ENST00000512107	DOK4	Q8TEW6	326 aa		13.7	□□□□□ -0.22
MATR3-238	ENST00000512107	FKBP10	Q96AY3	582 aa		13.7	□□□□□ -0.22
MATR3-238	ENST00000512107	ANKRD9	Q96BM1	317 aa	Predicted RBP	13.7	□□□□□ -0.22
MATR3-238	ENST00000512107	NPL	Q9BXD5	320 aa	Predicted RBP	13.7	□□□□□ -0.22
MATR3-238	ENST00000512107	TGIF2	Q9GZN2	237 aa		13.7	□□□□□ -0.22
MATR3-238	ENST00000512107	VN1R1	Q9GZP7	353 aa		13.7	□□□□□ -0.22
MATR3-238	ENST00000512107	ACTL8	Q9H568	366 aa		13.7	□□□□□ -0.22
MATR3-238	ENST00000512107	COPS7B	Q9H9Q2	264 aa	Predicted RBP	13.7	□□□□□ -0.22
MATR3-238	ENST00000512107	LYRM4	Q9HD34	91 aa		13.7	□□□□□ -0.22
MATR3-238	ENST00000512107	NPHS2	Q9NP85	383 aa		13.7	□□□□□ -0.22
MATR3-238	ENST00000512107	MCM8	Q9UJA3	840 aa		13.7	□□□□□ -0.22
MATR3-238	ENST00000512107	DCTN4	Q9UJW0	460 aa		13.7	□□□□□ -0.22
MATR3-238	ENST00000512107	CES1P1	Q9UKY3	287 aa		13.7	□□□□□ -0.22
MATR3-238	ENST00000512107	FARSA	Q9Y285	508 aa	Known RBP	13.7	□□□□□ -0.22
MATR3-238	ENST00000512107	APC2	O95996	2303 aa		13.7	□□□□□ -0.22
MATR3-238	ENST00000512107	IL3	P08700	152 aa		13.69	□□□□□ -0.22
MATR3-238	ENST00000512107	MAOA	P21397	527 aa		13.69	□□□□□ -0.22
MATR3-238	ENST00000512107	PTPN4	P29074	926 aa		13.69	□□□□□ -0.22
MATR3-238	ENST00000512107	PTGER1	P34995	402 aa		13.69	□□□□□ -0.22
MATR3-238	ENST00000512107	ARFIP1	P53367	373 aa		13.69	□□□□□ -0.22
MATR3-238	ENST00000512107	TAS2R50	P59544	299 aa		13.69	□□□□□ -0.22
MATR3-238	ENST00000512107	TNFRSF17	Q02223	184 aa		13.69	□□□□□ -0.22
MATR3-238	ENST00000512107	TGM3	Q08188	693 aa		13.69	□□□□□ -0.22
MATR3-238	ENST00000512107	SPIN4	Q56A73	249 aa		13.69	□□□□□ -0.22
MATR3-238	ENST00000512107	IL23R	Q5VWK5	629 aa		13.69	□□□□□ -0.22
MATR3-238	ENST00000512107	FAM71E1	Q6IPT2	247 aa		13.69	□□□□□ -0.22
MATR3-238	ENST00000512107	LANCL3	Q6ZV70	420 aa		13.69	□□□□□ -0.22
MATR3-238	ENST00000512107	GPR180	Q86V85	440 aa		13.69	□□□□□ -0.22
MATR3-238	ENST00000512107	SPACA3	Q8IXA5	215 aa		13.69	□□□□□ -0.22
MATR3-238	ENST00000512107	LIX1	Q8N485	282 aa		13.69	□□□□□ -0.22
MATR3-238	ENST00000512107	IL22RA1	Q8N6P7	574 aa		13.69	□□□□□ -0.22
MATR3-238	ENST00000512107	EFCAB3	Q8N7B9	438 aa		13.69	□□□□□ -0.22
MATR3-238	ENST00000512107	SRFBP1	Q8NEF9	429 aa	Known RBP	13.69	□□□□□ -0.22
MATR3-238	ENST00000512107	KCNE4	Q8WWG9	221 aa		13.69	□□□□□ -0.22
MATR3-238	ENST00000512107	TBC1D20	Q96BZ9	403 aa		13.69	□□□□□ -0.22
MATR3-238	ENST00000512107	TEX37	Q96LM6	180 aa		13.69	□□□□□ -0.22
MATR3-238	ENST00000512107	TSSK3	Q96PN8	268 aa		13.69	□□□□□ -0.22
MATR3-238	ENST00000512107	DPH2	Q9BQC3	489 aa	Predicted RBP	13.69	□□□□□ -0.22
MATR3-238	ENST00000512107	MKKS	Q9NPJ1	570 aa	Predicted RBP	13.69	□□□□□ -0.22
MATR3-238	ENST00000512107	ZNF282	Q9UDV7	671 aa	Predicted RBP	13.69	□□□□□ -0.22
MATR3-238	ENST00000512107	VTI1B	Q9UEU0	232 aa		13.69	□□□□□ -0.22
MATR3-238	ENST00000512107	TCFL5	Q9UL49	500 aa		13.69	□□□□□ -0.22
MATR3-238	ENST00000512107	G3BP2	Q9UN86	482 aa	Known RBP	13.69	□□□□□ -0.22
MATR3-238	ENST00000512107	PTRH2	Q9Y3E5	179 aa	Known RBP	13.69	□□□□□ -0.22
MATR3-238	ENST00000512107	CELSR3	Q9NYQ7	3312 aa		13.69	□□□□□ -0.22
MATR3-238	ENST00000512107	IGF2R	P11717	2491 aa		13.68	□□□□□ -0.22
MATR3-238	ENST00000512107	IGHV3-20	A0A0C4DH32	117 aa		13.68	□□□□□ -0.22
MATR3-238	ENST00000512107	ANKRD28	O15084	1053 aa		13.68	□□□□□ -0.22
MATR3-238	ENST00000512107	NKX2-8	O15522	239 aa		13.68	□□□□□ -0.22
MATR3-238	ENST00000512107	KLK10	O43240	276 aa		13.68	□□□□□ -0.22
MATR3-238	ENST00000512107	FGF17	O60258	216 aa		13.68	□□□□□ -0.22
MATR3-238	ENST00000512107	DIAPH2	O60879	1101 aa		13.68	□□□□□ -0.22
MATR3-238	ENST00000512107	LDB3	O75112	727 aa		13.68	□□□□□ -0.22
MATR3-238	ENST00000512107	ALOX12B	O75342	701 aa		13.68	□□□□□ -0.22
MATR3-238	ENST00000512107	LRAT	O95237	230 aa		13.68	□□□□□ -0.22
MATR3-238	ENST00000512107	ALB	P02768	609 aa		13.68	□□□□□ -0.22
MATR3-238	ENST00000512107	FH	P07954	510 aa		13.68	□□□□□ -0.22
MATR3-238	ENST00000512107	ANXA4	P09525	319 aa	Predicted RBP	13.68	□□□□□ -0.22
MATR3-238	ENST00000512107	G6PD	P11413	515 aa		13.68	□□□□□ -0.22
MATR3-238	ENST00000512107	RNH1	P13489	461 aa	Known RBP	13.68	□□□□□ -0.22
MATR3-238	ENST00000512107	CPN2	P22792	545 aa		13.68	□□□□□ -0.22
MATR3-238	ENST00000512107	SOX18	P35713	384 aa		13.68	□□□□□ -0.22
MATR3-238	ENST00000512107	TSFM	P43897	325 aa	Known RBP	13.68	□□□□□ -0.22
MATR3-238	ENST00000512107	MAPK12	P53778	367 aa		13.68	□□□□□ -0.22
MATR3-238	ENST00000512107	PTGR1	Q14914	329 aa		13.68	□□□□□ -0.22
MATR3-238	ENST00000512107	MPEG1	Q2M385	716 aa		13.68	□□□□□ -0.22
MATR3-238	ENST00000512107	ZNF385B	Q569K4	471 aa		13.68	□□□□□ -0.22
MATR3-238	ENST00000512107	ANKRD26P1	Q6NSI1	321 aa		13.68	□□□□□ -0.22
MATR3-238	ENST00000512107	CYP20A1	Q6UW02	462 aa		13.68	□□□□□ -0.22
MATR3-238	ENST00000512107	MED25	Q71SY5	747 aa		13.68	□□□□□ -0.22
MATR3-238	ENST00000512107	PPP1R32	Q7Z5V6	425 aa		13.68	□□□□□ -0.22
MATR3-238	ENST00000512107	SCUBE1	Q8IWY4	988 aa		13.68	□□□□□ -0.22
MATR3-238	ENST00000512107	KRTCAP2	Q8N6L1	136 aa		13.68	□□□□□ -0.22
MATR3-238	ENST00000512107	ADAMTS17	Q8TE56	1095 aa		13.68	□□□□□ -0.22
MATR3-238	ENST00000512107	GFM2	Q969S9	779 aa	Known RBP	13.68	□□□□□ -0.22
MATR3-238	ENST00000512107	MIEF2	Q96C03	454 aa		13.68	□□□□□ -0.22
MATR3-238	ENST00000512107	C8orf44	Q96CB5	159 aa		13.68	□□□□□ -0.22
MATR3-238	ENST00000512107	CRELD1	Q96HD1	420 aa		13.68	□□□□□ -0.22
MATR3-238	ENST00000512107	PPP3R2	Q96LZ3	170 aa		13.68	□□□□□ -0.22
MATR3-238	ENST00000512107	DCBLD2	Q96PD2	775 aa		13.68	□□□□□ -0.22
MATR3-238	ENST00000512107	WDR70	Q9NW82	654 aa		13.68	□□□□□ -0.22
MATR3-238	ENST00000512107	AHSP	Q9NZD4	102 aa		13.68	□□□□□ -0.22
MATR3-238	ENST00000512107	PCDHGA6	Q9Y5G7	932 aa		13.68	□□□□□ -0.22
MATR3-238	ENST00000512107	PCDHA9	Q9Y5H5	950 aa		13.68	□□□□□ -0.22
MATR3-238	ENST00000512107	DMXL2	Q8TDJ6	3036 aa		13.68	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms