RNA–Protein interactions for RNA: ENST00000512009.5

TRAPPC13-211, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 5,994 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-211ENST00000512009 C4orf17Q53FE4 359 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 FAM102BQ5T8I3 360 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 PTRHD1Q6GMV3 140 aaKnown RBP1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 ZNF529Q6P280 563 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 PRMT9Q6P2P2 845 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 DNAJC24Q6P3W2 148 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 BEND4Q6ZU67 534 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 CAMKMTQ7Z624 323 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 SDR16C5Q8N3Y7 309 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 ZNF671Q8TAW3 534 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 GPR152Q8TDT2 470 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 USP7Q93009 1102 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 TMCO6Q96DC7 493 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 ZC3HAV1LQ96H79 300 aaKnown RBP1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 RIPOR3Q96MK2 946 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 ZSWIM3Q96MP5 696 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 RPRD1AQ96P16 312 aaPredicted RBP1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 WDFY2Q96P53 400 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 CCNL2Q96S94 520 aaPredicted RBP1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 MYADMQ96S97 322 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 NRTNQ99748 197 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 TMEM175Q9BSA9 504 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 SPATA5L1Q9BVQ7 753 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 KATNAL1Q9BW62 490 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 TMEM120AQ9BXJ8 343 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 SLC29A3Q9BZD2 475 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 SLC6A15Q9H2J7 730 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 ZNF576Q9H609 170 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 ESRP2Q9H6T0 727 aaKnown RBP1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 SLC28A3Q9HAS3 691 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 ASAH2Q9NR71 780 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 C19orf12Q9NSK7 152 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 TDP1Q9NUW8 608 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 TBC1D23Q9NUY8 699 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 FAM118AQ9NWS6 357 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 SMPD4Q9NXE4 827 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 ASIC5Q9NY37 505 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 KCNK4Q9NYG8 393 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 IL17CQ9P0M4 197 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 GMEB2Q9UKD1 530 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 ITGB1BP2Q9UKP3 347 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 PPIEQ9UNP9 301 aaKnown RBP1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 ENTPD4Q9Y227 616 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 PKP3Q9Y446 797 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 OR10H1Q9Y4A9 318 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 PCDHGB7Q9Y5F8 929 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 PCDHGA6Q9Y5G7 932 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 SYNJ2BP-COX16A0A087WUM0 186 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 NEMP2A6NFY4 417 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 PIK3R2O00459 728 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 AIM2O14862 343 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 TAPBPO15533 448 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 SNAP91O60641 907 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 YPEL1O60688 119 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 HCN1O60741 890 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 GLRA3O75311 464 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 ATG12O94817 140 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 ZBTB11O95625 1053 aaPredicted RBP1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 CLIC3O95833 236 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 MT-CO2P00403 227 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 CFDP00746 253 aaPredicted RBP1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 IFNA4P05014 189 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 CLUP10909 449 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 HNRNPLP14866 589 aaKnown RBP eCLIP1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 FOSL1P15407 271 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 GNB3P16520 340 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 DNAJB1P25685 340 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 UGT1A5P35504 534 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 PGM1P36871 562 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 CEACAM6P40199 344 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 SLC19A1P41440 591 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 KIR3DL1P43629 444 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 HTR3AP46098 478 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 CCT3P49368 545 aaKnown RBP1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 ACADVLP49748 655 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 CCR4P51679 360 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 ART1P52961 327 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 EPHA4P54764 986 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 SMIM11AP58511 58 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 RPL11P62913 178 aaKnown RBP1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 PSPHP78330 225 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 HOXA4Q00056 320 aaPredicted RBP1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 PLD1Q13393 1074 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 ATP1A4Q13733 1029 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 CRMP1Q14194 572 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 TRIM25Q14258 630 aaKnown RBP1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 EMC2Q15006 297 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 TAF1CQ15572 869 aaPredicted RBP1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 ZNF239Q16600 458 aaKnown RBP1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 PCK2Q16822 640 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 UBE2NLQ5JXB2 153 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 LPCAT4Q643R3 524 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 OVOS1Q6IE37 1185 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 OR6B2Q6IFH4 312 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 NCEH1Q6PIU2 408 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 CASP12Q6UXS9 341 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 ASCL4Q6XD76 172 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 ZNF367Q7RTV3 350 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 FAM220AQ7Z4H9 259 aa1.57□□□□□ -2.16
TRAPPC13-211ENST00000512009 MILR1Q7Z6M3 343 aa1.57□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms