RNA–Protein interactions for RNA: ENST00000511978.5

MATR3-218, Transcript of matrin 3, human

TSL 3

Gene MATR3, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-218	ENST00000511978	GPR174	Q9BXC1	333 aa		5.07	□□□□□ -1.6
MATR3-218	ENST00000511978	ARRDC1-AS1	Q9H2J1	176 aa		5.07	□□□□□ -1.6
MATR3-218	ENST00000511978	C6orf106	Q9H6K1	298 aa	Predicted RBP	5.07	□□□□□ -1.6
MATR3-218	ENST00000511978	LRRC19	Q9H756	370 aa		5.07	□□□□□ -1.6
MATR3-218	ENST00000511978	RANGRF	Q9HD47	186 aa	Predicted RBP	5.07	□□□□□ -1.6
MATR3-218	ENST00000511978	WSB2	Q9NYS7	404 aa	Predicted RBP	5.07	□□□□□ -1.6
MATR3-218	ENST00000511978	HPCAL4	Q9UM19	191 aa		5.07	□□□□□ -1.6
MATR3-218	ENST00000511978	SCML1	Q9UN30	329 aa		5.07	□□□□□ -1.6
MATR3-218	ENST00000511978	MYO18A	Q92614	2054 aa	Known RBP	5.06	□□□□□ -1.6
MATR3-218	ENST00000511978	THADA	Q6YHU6	1953 aa		5.06	□□□□□ -1.6
MATR3-218	ENST00000511978	PCDH15	Q96QU1	1955 aa		5.06	□□□□□ -1.6
MATR3-218	ENST00000511978	CEP192	Q8TEP8	1941 aa		5.06	□□□□□ -1.6
MATR3-218	ENST00000511978	USP34	Q70CQ2	3546 aa		5.06	□□□□□ -1.6
MATR3-218	ENST00000511978	ZSCAN5C	A6NGD5	496 aa	Predicted RBP	5.06	□□□□□ -1.6
MATR3-218	ENST00000511978	ARHGAP42	A6NI28	874 aa		5.06	□□□□□ -1.6
MATR3-218	ENST00000511978	DFFA	O00273	331 aa		5.06	□□□□□ -1.6
MATR3-218	ENST00000511978	PLK4	O00444	970 aa		5.06	□□□□□ -1.6
MATR3-218	ENST00000511978	BUB1	O43683	1085 aa		5.06	□□□□□ -1.6
MATR3-218	ENST00000511978	ZNF821	O75541	412 aa	Predicted RBP	5.06	□□□□□ -1.6
MATR3-218	ENST00000511978	LCA5L	O95447	670 aa		5.06	□□□□□ -1.6
MATR3-218	ENST00000511978	GSR	P00390	522 aa		5.06	□□□□□ -1.6
MATR3-218	ENST00000511978	IL1B	P01584	269 aa		5.06	□□□□□ -1.6
MATR3-218	ENST00000511978	CTSL	P07711	333 aa		5.06	□□□□□ -1.6
MATR3-218	ENST00000511978	KRT7	P08729	469 aa		5.06	□□□□□ -1.6
MATR3-218	ENST00000511978	CD48	P09326	243 aa		5.06	□□□□□ -1.6
MATR3-218	ENST00000511978	DAO	P14920	347 aa		5.06	□□□□□ -1.6
MATR3-218	ENST00000511978	ERCC2	P18074	760 aa		5.06	□□□□□ -1.6
MATR3-218	ENST00000511978	ITGB6	P18564	788 aa		5.06	□□□□□ -1.6
MATR3-218	ENST00000511978	CHRNA3	P32297	505 aa		5.06	□□□□□ -1.6
MATR3-218	ENST00000511978	ACSL1	P33121	698 aa		5.06	□□□□□ -1.6
MATR3-218	ENST00000511978	DRD3	P35462	400 aa		5.06	□□□□□ -1.6
MATR3-218	ENST00000511978	CYLC1	P35663	651 aa	Predicted RBP	5.06	□□□□□ -1.6
MATR3-218	ENST00000511978	MAGEA1	P43355	309 aa		5.06	□□□□□ -1.6
MATR3-218	ENST00000511978	HCAR3	P49019	387 aa		5.06	□□□□□ -1.6
MATR3-218	ENST00000511978	DNA2	P51530	1060 aa		5.06	□□□□□ -1.6
MATR3-218	ENST00000511978	CCNH	P51946	323 aa	Predicted RBP	5.06	□□□□□ -1.6
MATR3-218	ENST00000511978	NDST2	P52849	883 aa		5.06	□□□□□ -1.6
MATR3-218	ENST00000511978	CDH6	P55285	790 aa		5.06	□□□□□ -1.6
MATR3-218	ENST00000511978	YBEY	P58557	167 aa	Predicted RBP	5.06	□□□□□ -1.6
MATR3-218	ENST00000511978	TAS2R40	P59535	323 aa		5.06	□□□□□ -1.6
MATR3-218	ENST00000511978	MESD	Q14696	234 aa		5.06	□□□□□ -1.6
MATR3-218	ENST00000511978	SF3B4	Q15427	424 aa	Known RBP eCLIP	5.06	□□□□□ -1.6	9e-8	■■■■□ 20.2
MATR3-218	ENST00000511978	SF3A2	Q15428	464 aa	Known RBP	5.06	□□□□□ -1.6
MATR3-218	ENST00000511978	CTF1	Q16619	201 aa		5.06	□□□□□ -1.6
MATR3-218	ENST00000511978	HADH	Q16836	314 aa	Known RBP	5.06	□□□□□ -1.6
MATR3-218	ENST00000511978	POM121L1P	Q3SYA9	428 aa		5.06	□□□□□ -1.6
MATR3-218	ENST00000511978	FAM46C	Q5VWP2	391 aa		5.06	□□□□□ -1.6
MATR3-218	ENST00000511978	KCTD18	Q6PI47	426 aa	Predicted RBP	5.06	□□□□□ -1.6
MATR3-218	ENST00000511978	TMCO3	Q6UWJ1	677 aa		5.06	□□□□□ -1.6
MATR3-218	ENST00000511978	LEKR1	Q6ZMV7	388 aa		5.06	□□□□□ -1.6
MATR3-218	ENST00000511978	CCDC170	Q8IYT3	715 aa		5.06	□□□□□ -1.6
MATR3-218	ENST00000511978	RYBP	Q8N488	228 aa	Predicted RBP	5.06	□□□□□ -1.6
MATR3-218	ENST00000511978	SPC24	Q8NBT2	197 aa		5.06	□□□□□ -1.6
MATR3-218	ENST00000511978	OR2AK2	Q8NG84	335 aa		5.06	□□□□□ -1.6
MATR3-218	ENST00000511978	OR2A12	Q8NGT7	310 aa		5.06	□□□□□ -1.6
MATR3-218	ENST00000511978	OR6K2	Q8NGY2	324 aa		5.06	□□□□□ -1.6
MATR3-218	ENST00000511978	SPATA22	Q8NHS9	363 aa		5.06	□□□□□ -1.6
MATR3-218	ENST00000511978	C3orf30	Q96M34	536 aa		5.06	□□□□□ -1.6
MATR3-218	ENST00000511978	GDAP1L1	Q96MZ0	367 aa		5.06	□□□□□ -1.6
MATR3-218	ENST00000511978	CSPG4P5	Q96PW8	444 aa		5.06	□□□□□ -1.6
MATR3-218	ENST00000511978	BAG1	Q99933	345 aa	Predicted RBP	5.06	□□□□□ -1.6
MATR3-218	ENST00000511978	OMD	Q99983	421 aa		5.06	□□□□□ -1.6
MATR3-218	ENST00000511978	PCGF1	Q9BSM1	259 aa		5.06	□□□□□ -1.6
MATR3-218	ENST00000511978	CALN1	Q9BXU9	219 aa		5.06	□□□□□ -1.6
MATR3-218	ENST00000511978	TM6SF2	Q9BZW4	377 aa		5.06	□□□□□ -1.6
MATR3-218	ENST00000511978	SLC39A8	Q9C0K1	460 aa		5.06	□□□□□ -1.6
MATR3-218	ENST00000511978	ZDHHC6	Q9H6R6	413 aa		5.06	□□□□□ -1.6
MATR3-218	ENST00000511978	PDF	Q9HBH1	243 aa		5.06	□□□□□ -1.6
MATR3-218	ENST00000511978	SGK2	Q9HBY8	427 aa		5.06	□□□□□ -1.6
MATR3-218	ENST00000511978	PCDH9	Q9HC56	1237 aa		5.06	□□□□□ -1.6
MATR3-218	ENST00000511978	FBXL12	Q9NXK8	326 aa		5.06	□□□□□ -1.6
MATR3-218	ENST00000511978	DONSON	Q9NYP3	566 aa		5.06	□□□□□ -1.6
MATR3-218	ENST00000511978	SMARCAL1	Q9NZC9	954 aa		5.06	□□□□□ -1.6
MATR3-218	ENST00000511978	CWC15	Q9P013	229 aa	Known RBP	5.06	□□□□□ -1.6
MATR3-218	ENST00000511978	RCOR3	Q9P2K3	495 aa	Predicted RBP	5.06	□□□□□ -1.6
MATR3-218	ENST00000511978	UBA2	Q9UBT2	640 aa	Predicted RBP	5.06	□□□□□ -1.6
MATR3-218	ENST00000511978	IL36A	Q9UHA7	158 aa		5.06	□□□□□ -1.6
MATR3-218	ENST00000511978	ZNF580	Q9UK33	172 aa		5.06	□□□□□ -1.6
MATR3-218	ENST00000511978	PILRB	Q9UKJ0	227 aa		5.06	□□□□□ -1.6
MATR3-218	ENST00000511978	CORO1C	Q9ULV4	474 aa	Predicted RBP	5.06	□□□□□ -1.6
MATR3-218	ENST00000511978	TFR2	Q9UP52	801 aa		5.06	□□□□□ -1.6
MATR3-218	ENST00000511978	NCKAP1	Q9Y2A7	1128 aa		5.06	□□□□□ -1.6
MATR3-218	ENST00000511978	MFHAS1	Q9Y4C4	1052 aa		5.06	□□□□□ -1.6
MATR3-218	ENST00000511978	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	5.06	□□□□□ -1.6
MATR3-218	ENST00000511978	MAU2	Q9Y6X3	613 aa		5.06	□□□□□ -1.6
MATR3-218	ENST00000511978	NUP205	Q92621	2012 aa		5.06	□□□□□ -1.6
MATR3-218	ENST00000511978	SPAG17	Q6Q759	2223 aa		5.05	□□□□□ -1.6
MATR3-218	ENST00000511978	PLXNA2	O75051	1894 aa		5.05	□□□□□ -1.6
MATR3-218	ENST00000511978	LNP1	A1A4G5	178 aa		5.05	□□□□□ -1.6
MATR3-218	ENST00000511978	LRRD1	A4D1F6	860 aa		5.05	□□□□□ -1.6
MATR3-218	ENST00000511978	FAM47DP	A6NHR8	397 aa		5.05	□□□□□ -1.6
MATR3-218	ENST00000511978	LRRC72	A6NJI9	287 aa		5.05	□□□□□ -1.6
MATR3-218	ENST00000511978	RNF103	O00237	685 aa		5.05	□□□□□ -1.6
MATR3-218	ENST00000511978	KPNA3	O00505	521 aa	Predicted RBP	5.05	□□□□□ -1.6
MATR3-218	ENST00000511978	ACOT8	O14734	319 aa		5.05	□□□□□ -1.6
MATR3-218	ENST00000511978	SLC7A4	O43246	635 aa		5.05	□□□□□ -1.6
MATR3-218	ENST00000511978	HCRTR2	O43614	444 aa		5.05	□□□□□ -1.6
MATR3-218	ENST00000511978	SPOP	O43791	374 aa		5.05	□□□□□ -1.6
MATR3-218	ENST00000511978	MFSD11	O43934	449 aa		5.05	□□□□□ -1.6
MATR3-218	ENST00000511978	PRAMEF11	O60813	436 aa		5.05	□□□□□ -1.6

Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms