RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 KCTD4Q8WVF5 259 aa4.8□□□□□ -1.64
TRAPPC11-208ENST00000511955 OIT3Q8WWZ8 545 aa4.8□□□□□ -1.64
TRAPPC11-208ENST00000511955 NELFBQ8WX92 580 aa4.8□□□□□ -1.64
TRAPPC11-208ENST00000511955 PYDC1Q8WXC3 89 aa4.8□□□□□ -1.64
TRAPPC11-208ENST00000511955 LPGAT1Q92604 370 aa4.8□□□□□ -1.64
TRAPPC11-208ENST00000511955 FCGR1BQ92637 280 aa4.8□□□□□ -1.64
TRAPPC11-208ENST00000511955 SLCO2A1Q92959 643 aa4.8□□□□□ -1.64
TRAPPC11-208ENST00000511955 MARS2Q96GW9 593 aaKnown RBP4.8□□□□□ -1.64
TRAPPC11-208ENST00000511955 PGAM5Q96HS1 289 aa4.8□□□□□ -1.64
TRAPPC11-208ENST00000511955 MRGPRX4Q96LA9 322 aa4.8□□□□□ -1.64
TRAPPC11-208ENST00000511955 SENP8Q96LD8 212 aa4.8□□□□□ -1.64
TRAPPC11-208ENST00000511955 COQ10AQ96MF6 247 aa4.8□□□□□ -1.64
TRAPPC11-208ENST00000511955 ZNF578Q96N58 590 aaPredicted RBP4.8□□□□□ -1.64
TRAPPC11-208ENST00000511955 CASD1Q96PB1 797 aa4.8□□□□□ -1.64
TRAPPC11-208ENST00000511955 INSM2Q96T92 566 aaPredicted RBP4.8□□□□□ -1.64
TRAPPC11-208ENST00000511955 NPY6RQ99463 290 aa4.8□□□□□ -1.64
TRAPPC11-208ENST00000511955 NAT9Q9BTE0 207 aa4.8□□□□□ -1.64
TRAPPC11-208ENST00000511955 BDH2Q9BUT1 245 aa4.8□□□□□ -1.64
TRAPPC11-208ENST00000511955 CDADC1Q9BWV3 514 aa4.8□□□□□ -1.64
TRAPPC11-208ENST00000511955 RAB1BQ9H0U4 201 aa4.8□□□□□ -1.64
TRAPPC11-208ENST00000511955 KCNN2Q9H2S1 579 aa4.8□□□□□ -1.64
TRAPPC11-208ENST00000511955 MIOSQ9NXC5 875 aa4.8□□□□□ -1.64
TRAPPC11-208ENST00000511955 CACNA2D2Q9NY47 1150 aa4.8□□□□□ -1.64
TRAPPC11-208ENST00000511955 PTTG3PQ9NZH4 202 aa4.8□□□□□ -1.64
TRAPPC11-208ENST00000511955 CTTNBP2NLQ9P2B4 639 aa4.8□□□□□ -1.64
TRAPPC11-208ENST00000511955 SLC17A7Q9P2U7 560 aa4.8□□□□□ -1.64
TRAPPC11-208ENST00000511955 PRSS50Q9UI38 385 aa4.8□□□□□ -1.64
TRAPPC11-208ENST00000511955 FBXW11Q9UKB1 542 aa4.8□□□□□ -1.64
TRAPPC11-208ENST00000511955 PLAGL1Q9UM63 463 aa4.8□□□□□ -1.64
TRAPPC11-208ENST00000511955 EIF3LQ9Y262 564 aaKnown RBP4.8□□□□□ -1.64
TRAPPC11-208ENST00000511955 STARD10Q9Y365 291 aa4.8□□□□□ -1.64
TRAPPC11-208ENST00000511955 MICAL3Q7RTP6 2002 aa4.8□□□□□ -1.64
TRAPPC11-208ENST00000511955 MYO7AQ13402 2215 aa4.8□□□□□ -1.64
TRAPPC11-208ENST00000511955 ZMYM2Q9UBW7 1377 aa4.8□□□□□ -1.64
TRAPPC11-208ENST00000511955 TRIOO75962 3097 aa4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 A0A0A6YYK5 440 aaPredicted RBP4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 A0A1W2PQM1 296 aa4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 A0A1W2PRB8 838 aa4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 FAM149AA5PLN7 773 aa4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 C5orf60A6NFR6 353 aa4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 SAC3D1A6NKF1 404 aa4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 MIF4GDA9UHW6 222 aaKnown RBP4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 I3L4J1 428 aa4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 SLC9A3R1O14745 358 aaPredicted RBP4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 PAGE4O60829 102 aa4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 LEFTY1O75610 366 aa4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 CER1O95813 267 aa4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 CD3EP07766 207 aa4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 CTXN2P0C2S0 81 aa4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 PNMTP11086 282 aa4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 G6PDP11413 515 aa4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 CCNB1P14635 433 aa4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 MMP9P14780 707 aa4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 IGFBP6P24592 240 aaPredicted RBP4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 SERPINB1P30740 379 aa4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 APOBEC3AP31941 199 aaPredicted RBP4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 EMP2P54851 167 aa4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 AP3S2P59780 193 aa4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 CSNK1G2P78368 415 aa4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 FCHO2Q0JRZ9 810 aa4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 STX1AQ16623 288 aa4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 TBRG1Q3YBR2 411 aa4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 METTL21CQ5VZV1 264 aa4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 MSANTD2Q6P1R3 559 aa4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 VSTM1Q6UX27 236 aa4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 LRRC74BQ6ZQY2 392 aa4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 POLNQ7Z5Q5 900 aa4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 PIGWQ7Z7B1 504 aa4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 RBM23Q86U06 439 aaKnown RBP4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 CDK20Q8IZL9 346 aa4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 LNX2Q8N448 690 aa4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 CYB561A3Q8NBI2 242 aa4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 OR5D18Q8NGL1 313 aa4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 TBC1D15Q8TC07 691 aa4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 GLYATL2Q8WU03 294 aa4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 MYLIPQ8WY64 445 aa4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 CD101Q93033 1021 aa4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 FAM46BQ96A09 425 aa4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 C18orf25Q96B23 403 aaPredicted RBP4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 SLC7A6OSQ96CW6 309 aaPredicted RBP4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 TEFMQ96QE5 360 aaKnown RBP4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 KRT12Q99456 494 aa4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 SPATA5L1Q9BVQ7 753 aa4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 SGPP1Q9BX95 441 aa4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 ANGPTL4Q9BY76 406 aa4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 RACGAP1Q9H0H5 632 aa4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 HIPK2Q9H2X6 1198 aa4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 MMP27Q9H306 513 aa4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 OR51B5Q9H339 312 aa4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 SRD5A3Q9H8P0 318 aa4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 PIGVQ9NUD9 493 aa4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 TXLNGQ9NUQ3 528 aa4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 MED17Q9NVC6 651 aa4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 GFOD1Q9NXC2 390 aa4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 GTSE1Q9NYZ3 720 aa4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 APOBEC3BQ9UH17 382 aaKnown RBP4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 PKP3Q9Y446 797 aa4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 TMEM184BQ9Y519 407 aaPredicted RBP4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 PTPRSQ13332 1948 aa4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 PVALEFA0A1B0GWK0 134 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms