RNA–Protein interactions for RNA: ENST00000511633.5

NEK1-207, Transcript of NIMA related kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK1, Length 5,536 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-207ENST00000511633 ARFGAP1Q8N6T3 406 aa8.68□□□□□ -1.02
NEK1-207ENST00000511633 MDGA1Q8NFP4 955 aa8.68□□□□□ -1.02
NEK1-207ENST00000511633 PNPLA2Q96AD5 504 aa8.68□□□□□ -1.02
NEK1-207ENST00000511633 RTP4Q96DX8 246 aa8.68□□□□□ -1.02
NEK1-207ENST00000511633 CMKLR1Q99788 373 aa8.68□□□□□ -1.02
NEK1-207ENST00000511633 ORAI3Q9BRQ5 295 aa8.68□□□□□ -1.02
NEK1-207ENST00000511633 SLC46A2Q9BY10 475 aa8.68□□□□□ -1.02
NEK1-207ENST00000511633 IGSF5Q9NSI5 407 aa8.68□□□□□ -1.02
NEK1-207ENST00000511633 ZNF221Q9UK13 617 aa8.68□□□□□ -1.02
NEK1-207ENST00000511633 TBC1D24Q9ULP9 559 aa8.68□□□□□ -1.02
NEK1-207ENST00000511633 ZFR2Q9UPR6 939 aaKnown RBP8.68□□□□□ -1.02
NEK1-207ENST00000511633 MYH8P13535 1937 aa8.68□□□□□ -1.02
NEK1-207ENST00000511633 C2orf92A0A1B0GVN3 265 aa8.68□□□□□ -1.02
NEK1-207ENST00000511633 A0A1W2PPL8 197 aa8.68□□□□□ -1.02
NEK1-207ENST00000511633 ZNF217O75362 1048 aa8.68□□□□□ -1.02
NEK1-207ENST00000511633 SLC16A8O95907 504 aa8.68□□□□□ -1.02
NEK1-207ENST00000511633 MRPL3P09001 348 aaKnown RBP8.68□□□□□ -1.02
NEK1-207ENST00000511633 IL1RNP18510 177 aa8.68□□□□□ -1.02
NEK1-207ENST00000511633 RABIFP47224 123 aa8.68□□□□□ -1.02
NEK1-207ENST00000511633 GRIN2CQ14957 1233 aa8.68□□□□□ -1.02
NEK1-207ENST00000511633 NADK2Q4G0N4 442 aa8.68□□□□□ -1.02
NEK1-207ENST00000511633 SLC36A4Q6YBV0 504 aa8.68□□□□□ -1.02
NEK1-207ENST00000511633 RNF111Q6ZNA4 994 aa8.68□□□□□ -1.02
NEK1-207ENST00000511633 TRIM73Q86UV7 250 aa8.68□□□□□ -1.02
NEK1-207ENST00000511633 ZNF101Q8IZC7 436 aa8.68□□□□□ -1.02
NEK1-207ENST00000511633 JAGN1Q8N5M9 183 aa8.68□□□□□ -1.02
NEK1-207ENST00000511633 PNLDC1Q8NA58 520 aaKnown RBP8.68□□□□□ -1.02
NEK1-207ENST00000511633 OR5AR1Q8NGP9 310 aa8.68□□□□□ -1.02
NEK1-207ENST00000511633 ZIC5Q96T25 663 aa8.68□□□□□ -1.02
NEK1-207ENST00000511633 CDCA3Q99618 268 aaPredicted RBP8.68□□□□□ -1.02
NEK1-207ENST00000511633 WDR77Q9BQA1 342 aaPredicted RBP8.68□□□□□ -1.02
NEK1-207ENST00000511633 ARHGAP9Q9BRR9 750 aa8.68□□□□□ -1.02
NEK1-207ENST00000511633 POLDIP3Q9BY77 421 aaKnown RBP8.68□□□□□ -1.02
NEK1-207ENST00000511633 RNF38Q9H0F5 515 aa8.68□□□□□ -1.02
NEK1-207ENST00000511633 CST11Q9H112 138 aa8.68□□□□□ -1.02
NEK1-207ENST00000511633 LMAN1LQ9HAT1 526 aa8.68□□□□□ -1.02
NEK1-207ENST00000511633 PAK6Q9NQU5 681 aaPredicted RBP8.68□□□□□ -1.02
NEK1-207ENST00000511633 SUSD2Q9UGT4 822 aa8.68□□□□□ -1.02
NEK1-207ENST00000511633 PRAMEF33A0A0G2JMD5 474 aa8.68□□□□□ -1.02
NEK1-207ENST00000511633 TMEM189-UBE2V1I3L0A0 370 aa8.68□□□□□ -1.02
NEK1-207ENST00000511633 AURKAO14965 403 aa8.68□□□□□ -1.02
NEK1-207ENST00000511633 PRAMEF10O60809 474 aa8.68□□□□□ -1.02
NEK1-207ENST00000511633 RNH1P13489 461 aaKnown RBP8.68□□□□□ -1.02
NEK1-207ENST00000511633 HK1P19367 917 aa8.68□□□□□ -1.02
NEK1-207ENST00000511633 SPATS1Q496A3 300 aa8.68□□□□□ -1.02
NEK1-207ENST00000511633 ISCA2Q86U28 154 aa8.68□□□□□ -1.02
NEK1-207ENST00000511633 IL22RA1Q8N6P7 574 aa8.68□□□□□ -1.02
NEK1-207ENST00000511633 RASGEF1AQ8N9B8 481 aa8.68□□□□□ -1.02
NEK1-207ENST00000511633 OSTF1Q92882 214 aa8.68□□□□□ -1.02
NEK1-207ENST00000511633 ZUFSPQ96AP4 578 aa8.68□□□□□ -1.02
NEK1-207ENST00000511633 PEX11GQ96HA9 241 aa8.68□□□□□ -1.02
NEK1-207ENST00000511633 HHIPQ96QV1 700 aa8.68□□□□□ -1.02
NEK1-207ENST00000511633 BARD1Q99728 777 aaKnown RBP8.68□□□□□ -1.02
NEK1-207ENST00000511633 DEFB126Q9BYW3 111 aa8.68□□□□□ -1.02
NEK1-207ENST00000511633 MKS1Q9NXB0 559 aa8.68□□□□□ -1.02
NEK1-207ENST00000511633 PCTPQ9UKL6 214 aa8.68□□□□□ -1.02
NEK1-207ENST00000511633 DNAJC15Q9Y5T4 150 aa8.68□□□□□ -1.02
NEK1-207ENST00000511633 PKD1L3Q7Z443 1732 aa8.68□□□□□ -1.02
NEK1-207ENST00000511633 SCAMP2O15127 329 aaKnown RBP8.68□□□□□ -1.02
NEK1-207ENST00000511633 CLEC3AO75596 197 aa8.68□□□□□ -1.02
NEK1-207ENST00000511633 C8BP07358 591 aa8.68□□□□□ -1.02
NEK1-207ENST00000511633 ATF6P18850 670 aa8.68□□□□□ -1.02
NEK1-207ENST00000511633 OR3A3P47888 321 aa8.68□□□□□ -1.02
NEK1-207ENST00000511633 OR3A2P47893 321 aa8.68□□□□□ -1.02
NEK1-207ENST00000511633 SLC9A3P48764 834 aa8.68□□□□□ -1.02
NEK1-207ENST00000511633 HNRNPKP61978 463 aaKnown RBP eCLIP8.68□□□□□ -1.02
NEK1-207ENST00000511633 SIM1P81133 766 aaPredicted RBP8.68□□□□□ -1.02
NEK1-207ENST00000511633 KCNC4Q03721 635 aa8.68□□□□□ -1.02
NEK1-207ENST00000511633 ARFRP1Q13795 201 aa8.68□□□□□ -1.02
NEK1-207ENST00000511633 PGBD2Q6P3X8 592 aa8.68□□□□□ -1.02
NEK1-207ENST00000511633 UNC5DQ6UXZ4 953 aa8.68□□□□□ -1.02
NEK1-207ENST00000511633 CYS1Q717R9 158 aa8.68□□□□□ -1.02
NEK1-207ENST00000511633 ZNF550Q7Z398 422 aa8.68□□□□□ -1.02
NEK1-207ENST00000511633 PDSS2Q86YH6 399 aa8.68□□□□□ -1.02
NEK1-207ENST00000511633 GALNT12Q8IXK2 581 aa8.68□□□□□ -1.02
NEK1-207ENST00000511633 C7orf57Q8NEG2 295 aa8.68□□□□□ -1.02
NEK1-207ENST00000511633 FGF13Q92913 245 aa8.68□□□□□ -1.02
NEK1-207ENST00000511633 ZNF334Q9HCZ1 680 aaPredicted RBP8.68□□□□□ -1.02
NEK1-207ENST00000511633 UPB1Q9UBR1 384 aa8.68□□□□□ -1.02
NEK1-207ENST00000511633 MGAT4BQ9UQ53 548 aa8.68□□□□□ -1.02
NEK1-207ENST00000511633 SMIM30A4D0T7 59 aa8.67□□□□□ -1.02
NEK1-207ENST00000511633 EEDO75530 441 aaKnown RBP8.67□□□□□ -1.02
NEK1-207ENST00000511633 GATBO75879 557 aaKnown RBP8.67□□□□□ -1.02
NEK1-207ENST00000511633 GSTT2BP0CG30 244 aa8.67□□□□□ -1.02
NEK1-207ENST00000511633 PSKH1P11801 424 aa8.67□□□□□ -1.02
NEK1-207ENST00000511633 PGAM2P15259 253 aa8.67□□□□□ -1.02
NEK1-207ENST00000511633 CD72P21854 359 aa8.67□□□□□ -1.02
NEK1-207ENST00000511633 CST5P28325 142 aaPredicted RBP8.67□□□□□ -1.02
NEK1-207ENST00000511633 PER3P56645 1201 aa8.67□□□□□ -1.02
NEK1-207ENST00000511633 CLRN1P58418 232 aa8.67□□□□□ -1.02
NEK1-207ENST00000511633 SHC2P98077 582 aa8.67□□□□□ -1.02
NEK1-207ENST00000511633 PMS2P3Q13401 168 aa8.67□□□□□ -1.02
NEK1-207ENST00000511633 VMACQ2NL98 169 aa8.67□□□□□ -1.02
NEK1-207ENST00000511633 FIGLAQ6QHK4 219 aa8.67□□□□□ -1.02
NEK1-207ENST00000511633 PAMR1Q6UXH9 720 aa8.67□□□□□ -1.02
NEK1-207ENST00000511633 ASB18Q6ZVZ8 466 aa8.67□□□□□ -1.02
NEK1-207ENST00000511633 C6orf120Q7Z4R8 191 aa8.67□□□□□ -1.02
NEK1-207ENST00000511633 HSD11B1LQ7Z5J1 315 aa8.67□□□□□ -1.02
NEK1-207ENST00000511633 MRPL43Q8N983 215 aaKnown RBP8.67□□□□□ -1.02
NEK1-207ENST00000511633 NR4A3Q92570 626 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms