RNA–Protein interactions for RNA: ENST00000511586.5

PDLIM5-215, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-215ENST00000511586 GPR180Q86V85 440 aa6.72□□□□□ -1.33
PDLIM5-215ENST00000511586 EXOC3L1Q86VI1 746 aa6.72□□□□□ -1.33
PDLIM5-215ENST00000511586 HPS6Q86YV9 775 aa6.72□□□□□ -1.33
PDLIM5-215ENST00000511586 FAM47BQ8NA70 645 aa6.72□□□□□ -1.33
PDLIM5-215ENST00000511586 C7orf57Q8NEG2 295 aa6.72□□□□□ -1.33
PDLIM5-215ENST00000511586 AGAP11Q8TF27 550 aa6.72□□□□□ -1.33
PDLIM5-215ENST00000511586 SREK1Q8WXA9 508 aaKnown RBP6.72□□□□□ -1.33
PDLIM5-215ENST00000511586 TSLPQ969D9 159 aa6.72□□□□□ -1.33
PDLIM5-215ENST00000511586 THOC3Q96J01 351 aaKnown RBP6.72□□□□□ -1.33
PDLIM5-215ENST00000511586 CNDP1Q96KN2 507 aa6.72□□□□□ -1.33
PDLIM5-215ENST00000511586 IMMP1LQ96LU5 166 aa6.72□□□□□ -1.33
PDLIM5-215ENST00000511586 LPAR4Q99677 370 aa6.72□□□□□ -1.33
PDLIM5-215ENST00000511586 SMAD5Q99717 465 aaKnown RBP6.72□□□□□ -1.33
PDLIM5-215ENST00000511586 MAPKAP1Q9BPZ7 522 aa6.72□□□□□ -1.33
PDLIM5-215ENST00000511586 TRMOQ9BU70 441 aa6.72□□□□□ -1.33
PDLIM5-215ENST00000511586 NUDT9Q9BW91 350 aa6.72□□□□□ -1.33
PDLIM5-215ENST00000511586 SORBS1Q9BX66 1292 aaKnown RBP6.72□□□□□ -1.33
PDLIM5-215ENST00000511586 LHPPQ9H008 270 aa6.72□□□□□ -1.33
PDLIM5-215ENST00000511586 ZNF552Q9H707 407 aaPredicted RBP6.72□□□□□ -1.33
PDLIM5-215ENST00000511586 NECTIN3Q9NQS3 549 aa6.72□□□□□ -1.33
PDLIM5-215ENST00000511586 PRTFDC1Q9NRG1 225 aa6.72□□□□□ -1.33
PDLIM5-215ENST00000511586 C5AR2Q9P296 337 aa6.72□□□□□ -1.33
PDLIM5-215ENST00000511586 VPS29Q9UBQ0 182 aa6.72□□□□□ -1.33
PDLIM5-215ENST00000511586 ADAM29Q9UKF5 820 aa6.72□□□□□ -1.33
PDLIM5-215ENST00000511586 SLC12A4Q9UP95 1085 aa6.72□□□□□ -1.33
PDLIM5-215ENST00000511586 ACTL7BQ9Y614 415 aa6.72□□□□□ -1.33
PDLIM5-215ENST00000511586 SCN3AQ9NY46 2000 aa6.72□□□□□ -1.33
PDLIM5-215ENST00000511586 CCDC88CQ9P219 2028 aa6.72□□□□□ -1.33
PDLIM5-215ENST00000511586 FAM208BQ5VWN6 2430 aa6.71□□□□□ -1.33
PDLIM5-215ENST00000511586 ITPR1Q14643 2758 aa6.71□□□□□ -1.33
PDLIM5-215ENST00000511586 PCSK5Q92824 1860 aa6.71□□□□□ -1.34
PDLIM5-215ENST00000511586 IGKV3D-11A0A0A0MRZ8 115 aa6.71□□□□□ -1.34
PDLIM5-215ENST00000511586 A0A0A6YYD5 115 aa6.71□□□□□ -1.34
PDLIM5-215ENST00000511586 IGHV3-20A0A0C4DH32 117 aa6.71□□□□□ -1.34
PDLIM5-215ENST00000511586 TCRBV16S1A1N1A0A5B0 115 aa6.71□□□□□ -1.34
PDLIM5-215ENST00000511586 ARHGAP10A1A4S6 786 aa6.71□□□□□ -1.34
PDLIM5-215ENST00000511586 B8ZZF3 427 aa6.71□□□□□ -1.34
PDLIM5-215ENST00000511586 K7EM74 188 aa6.71□□□□□ -1.34
PDLIM5-215ENST00000511586 TM9SF1O15321 606 aa6.71□□□□□ -1.34
PDLIM5-215ENST00000511586 PROM1O43490 865 aa6.71□□□□□ -1.34
PDLIM5-215ENST00000511586 TMPRSS11DO60235 418 aa6.71□□□□□ -1.34
PDLIM5-215ENST00000511586 NPHS1O60500 1241 aa6.71□□□□□ -1.34
PDLIM5-215ENST00000511586 EEDO75530 441 aaKnown RBP6.71□□□□□ -1.34
PDLIM5-215ENST00000511586 CRCPO75575 148 aa6.71□□□□□ -1.34
PDLIM5-215ENST00000511586 C1QL1O75973 258 aa6.71□□□□□ -1.34
PDLIM5-215ENST00000511586 SEC24DO94855 1032 aaPredicted RBP6.71□□□□□ -1.34
PDLIM5-215ENST00000511586 ZWINTO95229 277 aa6.71□□□□□ -1.34
PDLIM5-215ENST00000511586 PDGFAP04085 211 aa6.71□□□□□ -1.34
PDLIM5-215ENST00000511586 KLK1P06870 262 aa6.71□□□□□ -1.34
PDLIM5-215ENST00000511586 BPGMP07738 259 aa6.71□□□□□ -1.34
PDLIM5-215ENST00000511586 FAM58BPP0C7Q3 252 aa6.71□□□□□ -1.34
PDLIM5-215ENST00000511586 BSGP35613 385 aa6.71□□□□□ -1.34
PDLIM5-215ENST00000511586 MDH1P40925 334 aaKnown RBP6.71□□□□□ -1.34
PDLIM5-215ENST00000511586 BUD31P41223 144 aaPredicted RBP6.71□□□□□ -1.34
PDLIM5-215ENST00000511586 HNRNPFP52597 415 aaKnown RBP6.71□□□□□ -1.34
PDLIM5-215ENST00000511586 STX4Q12846 297 aa6.71□□□□□ -1.34
PDLIM5-215ENST00000511586 CSTF3Q12996 717 aaKnown RBP6.71□□□□□ -1.34
PDLIM5-215ENST00000511586 BTBD16Q32M84 506 aa6.71□□□□□ -1.34
PDLIM5-215ENST00000511586 TCHHL1Q5QJ38 904 aaPredicted RBP6.71□□□□□ -1.34
PDLIM5-215ENST00000511586 AGAP7PQ5VUJ5 663 aa6.71□□□□□ -1.34
PDLIM5-215ENST00000511586 MRM1Q6IN84 353 aaKnown RBP6.71□□□□□ -1.34
PDLIM5-215ENST00000511586 JMJD6Q6NYC1 403 aaPredicted RBP6.71□□□□□ -1.34
PDLIM5-215ENST00000511586 PAPD4Q6PIY7 484 aaKnown RBP6.71□□□□□ -1.34
PDLIM5-215ENST00000511586 NUDT13Q86X67 352 aa6.71□□□□□ -1.34
PDLIM5-215ENST00000511586 SCUBE1Q8IWY4 988 aa6.71□□□□□ -1.34
PDLIM5-215ENST00000511586 METTL4Q8N3J2 472 aa6.71□□□□□ -1.34
PDLIM5-215ENST00000511586 ZNF843Q8N446 348 aa6.71□□□□□ -1.34
PDLIM5-215ENST00000511586 EFCAB3Q8N7B9 438 aa6.71□□□□□ -1.34
PDLIM5-215ENST00000511586 GBP7Q8N8V2 638 aaPredicted RBP6.71□□□□□ -1.34
PDLIM5-215ENST00000511586 TEX19Q8NA77 164 aa6.71□□□□□ -1.34
PDLIM5-215ENST00000511586 TMEM52Q8NDY8 209 aa6.71□□□□□ -1.34
PDLIM5-215ENST00000511586 M1APQ8TC57 530 aa6.71□□□□□ -1.34
PDLIM5-215ENST00000511586 TM9SF4Q92544 642 aa6.71□□□□□ -1.34
PDLIM5-215ENST00000511586 TANKQ92844 425 aa6.71□□□□□ -1.34
PDLIM5-215ENST00000511586 AGAP4Q96P64 663 aa6.71□□□□□ -1.34
PDLIM5-215ENST00000511586 LMF1Q96S06 567 aa6.71□□□□□ -1.34
PDLIM5-215ENST00000511586 CSF3RQ99062 836 aa6.71□□□□□ -1.34
PDLIM5-215ENST00000511586 WDR77Q9BQA1 342 aaPredicted RBP6.71□□□□□ -1.34
PDLIM5-215ENST00000511586 MECRQ9BV79 373 aa6.71□□□□□ -1.34
PDLIM5-215ENST00000511586 GATA5Q9BWX5 397 aaPredicted RBP6.71□□□□□ -1.34
PDLIM5-215ENST00000511586 ZNF717Q9BY31 904 aaPredicted RBP6.71□□□□□ -1.34
PDLIM5-215ENST00000511586 MRPL1Q9BYD6 325 aaKnown RBP6.71□□□□□ -1.34
PDLIM5-215ENST00000511586 RPF2Q9H7B2 306 aaKnown RBP6.71□□□□□ -1.34
PDLIM5-215ENST00000511586 WDR41Q9HAD4 459 aa6.71□□□□□ -1.34
PDLIM5-215ENST00000511586 EML4Q9HC35 981 aaKnown RBP6.71□□□□□ -1.34
PDLIM5-215ENST00000511586 KCNK9Q9NPC2 374 aa6.71□□□□□ -1.34
PDLIM5-215ENST00000511586 LYARQ9NX58 379 aaKnown RBP6.71□□□□□ -1.34
PDLIM5-215ENST00000511586 PHF11Q9UIL8 331 aa6.71□□□□□ -1.34
PDLIM5-215ENST00000511586 FBXW2Q9UKT8 454 aa6.71□□□□□ -1.34
PDLIM5-215ENST00000511586 ATG4BQ9Y4P1 393 aa6.71□□□□□ -1.34
PDLIM5-215ENST00000511586 ASB4Q9Y574 426 aa6.71□□□□□ -1.34
PDLIM5-215ENST00000511586 TIMM22Q9Y584 194 aa6.71□□□□□ -1.34
PDLIM5-215ENST00000511586 HEMK1Q9Y5R4 338 aaPredicted RBP6.71□□□□□ -1.34
PDLIM5-215ENST00000511586 A0A1W2PR48 441 aa6.7□□□□□ -1.34
PDLIM5-215ENST00000511586 SERTM1A2A2V5 107 aa6.7□□□□□ -1.34
PDLIM5-215ENST00000511586 SAGE2PA6NJ88 616 aa6.7□□□□□ -1.34
PDLIM5-215ENST00000511586 DPM1O60762 260 aa6.7□□□□□ -1.34
PDLIM5-215ENST00000511586 SHOX2O60902 331 aaPredicted RBP6.7□□□□□ -1.34
PDLIM5-215ENST00000511586 GUCY1B2O75343 617 aa6.7□□□□□ -1.34
PDLIM5-215ENST00000511586 CHEK2O96017 543 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms