RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 TUBAL3A6NHL2 446 aa4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 OR6C70A6NIJ9 312 aa4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 LINC00587B1AMM8 73 aa4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 CCDC188H7C350 402 aa4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 PSMD12O00232 456 aaPredicted RBP4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 ABCD4O14678 606 aa4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 SYN3O14994 580 aa4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 HS6ST1O60243 411 aa4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 HBP1O60381 514 aa4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 HUS1O60921 280 aa4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 KERAO60938 352 aa4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 RFPL2O75678 378 aa4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 FAM155BO75949 473 aa4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 CLPXO76031 633 aa4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 NEURL1O76050 574 aa4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 MFN2O95140 757 aa4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 GOSR1O95249 250 aa4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 NSA2O95478 260 aaKnown RBP4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 METTL18O95568 372 aa4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 BCL10O95999 233 aa4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 MBP02144 154 aa4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 TK1P04183 234 aa4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 SHBGP04278 402 aa4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 PROS1P07225 676 aa4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 HSPD1P10809 573 aaKnown RBP4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 THRAP10827 490 aa4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 COX4I1P13073 169 aa4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 PRPH2P23942 346 aa4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 KLRC2P26717 231 aa4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 PIK3R1P27986 724 aa4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 CCND2P30279 289 aa4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 FDFT1P37268 417 aa4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 DDOSTP39656 456 aa4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 PPP3CCP48454 512 aa4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 SERPINB10P48595 397 aa4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 LIG4P49917 911 aa4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 HNMTP50135 292 aa4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 SERPINB9P50453 376 aa4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 P2RY4P51582 365 aa4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 AKR1D1P51857 326 aa4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 CAPZA1P52907 286 aa4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 TAS2R60P59551 318 aa4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 ACTR3P61158 418 aa4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 ARF5P84085 180 aa4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 IL9RQ01113 521 aa4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 BST2Q10589 180 aaKnown RBP4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 STX4Q12846 297 aa4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 ZNF177Q13360 481 aaPredicted RBP4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 ART3Q13508 389 aa4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 THOC5Q13769 683 aaKnown RBP4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 EFR3AQ14156 821 aa4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 PON3Q15166 354 aa4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 NECTIN1Q15223 517 aa4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 ANGPT1Q15389 498 aa4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 SPA17Q15506 151 aa4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 NAB2Q15742 525 aa4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 TAB1Q15750 504 aa4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 CA9Q16790 459 aa4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 TMEM44Q2T9K0 475 aa4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 EPC2Q52LR7 807 aa4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 SBK1Q52WX2 424 aa4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 ARMCX4Q5H9R4 360 aa4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 Q5PR19 223 aa4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 PDSS1Q5T2R2 415 aa4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 GPATCH4Q5T3I0 446 aaKnown RBP4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 KRT80Q6KB66 452 aa4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 TTI2Q6NXR4 508 aa4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 CREB3L2Q70SY1 520 aa4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 CENPUQ71F23 418 aa4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 SMIM5Q71RC9 77 aa4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 SYT13Q7L8C5 426 aa4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 RRM2BQ7LG56 351 aa4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 SSX9Q7RTT3 188 aa4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 NUP54Q7Z3B4 507 aa4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 ZDHHC17Q8IUH5 632 aa4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 MCEMP1Q8IX19 187 aa4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 TIGD4Q8IY51 512 aa4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 RBFAQ8N0V3 343 aa4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 PDIK1LQ8N165 341 aa4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 ZNF321PQ8N8H1 164 aa4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 BEST2Q8NFU1 509 aa4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 TSPAN14Q8NG11 270 aa4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 OR7G3Q8NG95 312 aa4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 OR6Q1Q8NGQ2 317 aa4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 ST7LQ8TDW4 575 aa4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 CKAP2Q8WWK9 683 aa4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 FIG4Q92562 907 aa4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 TMIGD2Q96BF3 282 aa4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 ISOC1Q96CN7 298 aa4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 CSPG4P5Q96PW8 444 aa4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 TEFMQ96QE5 360 aaKnown RBP4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 TGS1Q96RS0 853 aaKnown RBP4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 CYTH2Q99418 400 aa4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 PKP4Q99569 1192 aa4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 SYT17Q9BSW7 474 aa4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 GSDMCQ9BYG8 508 aa4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 ALX4Q9H161 411 aaPredicted RBP4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 BLZF1Q9H2G9 400 aa4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 RHBGQ9H310 441 aa4.44□□□□□ -1.7
HMGB3P13-201ENST00000511263 OR51M1Q9H341 326 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms