RNA–Protein interactions for RNA: ENST00000510951.5

NR1I3-227, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 774 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-227ENST00000510951 ARFGAP2Q8N6H7 521 aa9.8□□□□□ -0.84
NR1I3-227ENST00000510951 CHTF18Q8WVB6 975 aa9.8□□□□□ -0.84
NR1I3-227ENST00000510951 CKAP2Q8WWK9 683 aa9.8□□□□□ -0.84
NR1I3-227ENST00000510951 C8orf44Q96CB5 159 aa9.8□□□□□ -0.84
NR1I3-227ENST00000510951 C3orf30Q96M34 536 aa9.8□□□□□ -0.84
NR1I3-227ENST00000510951 NUF2Q9BZD4 464 aa9.8□□□□□ -0.84
NR1I3-227ENST00000510951 TGIF2Q9GZN2 237 aa9.8□□□□□ -0.84
NR1I3-227ENST00000510951 LRTM1Q9HBL6 345 aa9.8□□□□□ -0.84
NR1I3-227ENST00000510951 SLCO1B3Q9NPD5 702 aa9.8□□□□□ -0.84
NR1I3-227ENST00000510951 PRTFDC1Q9NRG1 225 aa9.8□□□□□ -0.84
NR1I3-227ENST00000510951 LYARQ9NX58 379 aaKnown RBP9.8□□□□□ -0.84
NR1I3-227ENST00000510951 TEX10Q9NXF1 929 aaPredicted RBP9.8□□□□□ -0.84
NR1I3-227ENST00000510951 KCMF1Q9P0J7 381 aa9.8□□□□□ -0.84
NR1I3-227ENST00000510951 PHF11Q9UIL8 331 aa9.8□□□□□ -0.84
NR1I3-227ENST00000510951 HAO1Q9UJM8 370 aa9.8□□□□□ -0.84
NR1I3-227ENST00000510951 ADAM29Q9UKF5 820 aa9.8□□□□□ -0.84
NR1I3-227ENST00000510951 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.8□□□□□ -0.84
NR1I3-227ENST00000510951 ATG4BQ9Y4P1 393 aa9.8□□□□□ -0.84
NR1I3-227ENST00000510951 CCL27Q9Y4X3 112 aa9.8□□□□□ -0.84
NR1I3-227ENST00000510951 HS3ST3B1Q9Y662 390 aa9.8□□□□□ -0.84
NR1I3-227ENST00000510951 SPACA6W5XKT8 324 aa9.8□□□□□ -0.84
NR1I3-227ENST00000510951 PKD1L2Q7Z442 2459 aa9.8□□□□□ -0.84
NR1I3-227ENST00000510951 CFAP47Q6ZTR5 3102 aa9.8□□□□□ -0.84
NR1I3-227ENST00000510951 TNRC6AQ8NDV7 1962 aaKnown RBP9.79□□□□□ -0.84
NR1I3-227ENST00000510951 IGHV3-20A0A0C4DH32 117 aa9.79□□□□□ -0.84
NR1I3-227ENST00000510951 A0A1W2PR48 441 aa9.79□□□□□ -0.84
NR1I3-227ENST00000510951 GLOD5A6NK44 160 aa9.79□□□□□ -0.84
NR1I3-227ENST00000510951 K7ENP7 123 aa9.79□□□□□ -0.84
NR1I3-227ENST00000510951 MASP2O00187 686 aa9.79□□□□□ -0.84
NR1I3-227ENST00000510951 CYR61O00622 381 aa9.79□□□□□ -0.84
NR1I3-227ENST00000510951 LSM1O15116 133 aaKnown RBP9.79□□□□□ -0.84
NR1I3-227ENST00000510951 PRMT3O60678 531 aa9.79□□□□□ -0.84
NR1I3-227ENST00000510951 LDB3O75112 727 aa9.79□□□□□ -0.84
NR1I3-227ENST00000510951 PEX11AO75192 247 aa9.79□□□□□ -0.84
NR1I3-227ENST00000510951 SEC22BO75396 215 aa9.79□□□□□ -0.84
NR1I3-227ENST00000510951 SNUPNO95149 360 aaKnown RBP9.79□□□□□ -0.84
NR1I3-227ENST00000510951 AIFM1O95831 613 aa9.79□□□□□ -0.84
NR1I3-227ENST00000510951 RECKO95980 971 aa9.79□□□□□ -0.84
NR1I3-227ENST00000510951 C8orf89P0DMQ9 161 aa9.79□□□□□ -0.84
NR1I3-227ENST00000510951 NR2F6P10588 404 aa9.79□□□□□ -0.84
NR1I3-227ENST00000510951 IL10P22301 178 aa9.79□□□□□ -0.84
NR1I3-227ENST00000510951 MMP11P24347 488 aa9.79□□□□□ -0.84
NR1I3-227ENST00000510951 BUD31P41223 144 aaPredicted RBP9.79□□□□□ -0.84
NR1I3-227ENST00000510951 ARFIP1P53367 373 aa9.79□□□□□ -0.84
NR1I3-227ENST00000510951 MC1RQ01726 317 aa9.79□□□□□ -0.84
NR1I3-227ENST00000510951 GUCY1A3Q02108 690 aa9.79□□□□□ -0.84
NR1I3-227ENST00000510951 CHAF1BQ13112 559 aa9.79□□□□□ -0.84
NR1I3-227ENST00000510951 SLC13A2Q13183 592 aa9.79□□□□□ -0.84
NR1I3-227ENST00000510951 SSPNQ14714 243 aa9.79□□□□□ -0.84
NR1I3-227ENST00000510951 COL28A1Q2UY09 1125 aa9.79□□□□□ -0.84
NR1I3-227ENST00000510951 DEFB109BQ30KR1 87 aa9.79□□□□□ -0.84
NR1I3-227ENST00000510951 TUBB8Q3ZCM7 444 aa9.79□□□□□ -0.84
NR1I3-227ENST00000510951 CPZQ66K79 652 aa9.79□□□□□ -0.84
NR1I3-227ENST00000510951 MRM1Q6IN84 353 aaKnown RBP9.79□□□□□ -0.84
NR1I3-227ENST00000510951 INO80CQ6PI98 192 aaPredicted RBP9.79□□□□□ -0.84
NR1I3-227ENST00000510951 RNF165Q6ZSG1 346 aa9.79□□□□□ -0.84
NR1I3-227ENST00000510951 Q6ZSR9 355 aa9.79□□□□□ -0.84
NR1I3-227ENST00000510951 FAM76AQ8TAV0 307 aa9.79□□□□□ -0.84
NR1I3-227ENST00000510951 ADAMTS17Q8TE56 1095 aa9.79□□□□□ -0.84
NR1I3-227ENST00000510951 ADAMTS18Q8TE60 1221 aa9.79□□□□□ -0.84
NR1I3-227ENST00000510951 METTL21AQ8WXB1 218 aa9.79□□□□□ -0.84
NR1I3-227ENST00000510951 UCN3Q969E3 161 aa9.79□□□□□ -0.84
NR1I3-227ENST00000510951 TUBGCP3Q96CW5 907 aa9.79□□□□□ -0.84
NR1I3-227ENST00000510951 MAGEB18Q96M61 343 aa9.79□□□□□ -0.84
NR1I3-227ENST00000510951 PTCHD1Q96NR3 888 aa9.79□□□□□ -0.84
NR1I3-227ENST00000510951 C1orf50Q9BV19 199 aa9.79□□□□□ -0.84
NR1I3-227ENST00000510951 CLK4Q9HAZ1 481 aaKnown RBP9.79□□□□□ -0.84
NR1I3-227ENST00000510951 NECTIN3Q9NQS3 549 aa9.79□□□□□ -0.84
NR1I3-227ENST00000510951 SEMA3GQ9NS98 782 aa9.79□□□□□ -0.84
NR1I3-227ENST00000510951 RIC8BQ9NVN3 520 aa9.79□□□□□ -0.84
NR1I3-227ENST00000510951 C1orf109Q9NX04 203 aa9.79□□□□□ -0.84
NR1I3-227ENST00000510951 MCM8Q9UJA3 840 aa9.79□□□□□ -0.84
NR1I3-227ENST00000510951 MRPS33Q9Y291 106 aaKnown RBP9.79□□□□□ -0.84
NR1I3-227ENST00000510951 MAN2B2Q9Y2E5 1009 aa9.79□□□□□ -0.84
NR1I3-227ENST00000510951 ASB4Q9Y574 426 aa9.79□□□□□ -0.84
NR1I3-227ENST00000510951 ARGFXA6NJG6 315 aa9.78□□□□□ -0.84
NR1I3-227ENST00000510951 WASHC1A8K0Z3 465 aa9.78□□□□□ -0.84
NR1I3-227ENST00000510951 TGFBR3LH3BV60 316 aa9.78□□□□□ -0.84
NR1I3-227ENST00000510951 CLDN4O14493 209 aa9.78□□□□□ -0.84
NR1I3-227ENST00000510951 SOCS6O14544 535 aa9.78□□□□□ -0.84
NR1I3-227ENST00000510951 MYO1DO94832 1006 aa9.78□□□□□ -0.84
NR1I3-227ENST00000510951 IL3P08700 152 aa9.78□□□□□ -0.84
NR1I3-227ENST00000510951 ANXA4P09525 319 aaPredicted RBP9.78□□□□□ -0.84
NR1I3-227ENST00000510951 ACPPP15309 386 aa9.78□□□□□ -0.84
NR1I3-227ENST00000510951 PRPH2P23942 346 aa9.78□□□□□ -0.84
NR1I3-227ENST00000510951 PPP2R1BP30154 601 aa9.78□□□□□ -0.84
NR1I3-227ENST00000510951 ALDH9A1P49189 494 aa9.78□□□□□ -0.84
NR1I3-227ENST00000510951 HK2P52789 917 aa9.78□□□□□ -0.84
NR1I3-227ENST00000510951 TAS2R50P59544 299 aa9.78□□□□□ -0.84
NR1I3-227ENST00000510951 ZNF763Q0D2J5 394 aa9.78□□□□□ -0.84
NR1I3-227ENST00000510951 NSDHLQ15738 373 aa9.78□□□□□ -0.84
NR1I3-227ENST00000510951 ATP6AP1LQ52LC2 224 aa9.78□□□□□ -0.84
NR1I3-227ENST00000510951 NDUFAF5Q5TEU4 345 aa9.78□□□□□ -0.84
NR1I3-227ENST00000510951 VWA5B1Q5TIE3 1220 aa9.78□□□□□ -0.84
NR1I3-227ENST00000510951 QSOX2Q6ZRP7 698 aa9.78□□□□□ -0.84
NR1I3-227ENST00000510951 ANKRD37Q7Z713 158 aa9.78□□□□□ -0.84
NR1I3-227ENST00000510951 CRLF3Q8IUI8 442 aa9.78□□□□□ -0.84
NR1I3-227ENST00000510951 SCUBE1Q8IWY4 988 aa9.78□□□□□ -0.84
NR1I3-227ENST00000510951 OR4N5Q8IXE1 308 aa9.78□□□□□ -0.84
NR1I3-227ENST00000510951 KIRREL3Q8IZU9 778 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms