RNA–Protein interactions for RNA: ENST00000508474.5

UBE2D3-224, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 4,819 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-224ENST00000508474 PNLDC1Q8NA58 520 aaKnown RBP7.04□□□□□ -1.28
UBE2D3-224ENST00000508474 OR56A1Q8NGH5 318 aa7.04□□□□□ -1.28
UBE2D3-224ENST00000508474 LRRC15Q8TF66 581 aa7.04□□□□□ -1.28
UBE2D3-224ENST00000508474 C7orf34Q96L11 122 aa7.04□□□□□ -1.28
UBE2D3-224ENST00000508474 FEVQ99581 238 aa7.04□□□□□ -1.28
UBE2D3-224ENST00000508474 PSD2Q9BQI7 771 aa7.04□□□□□ -1.28
UBE2D3-224ENST00000508474 BRINP2Q9C0B6 783 aa7.04□□□□□ -1.28
UBE2D3-224ENST00000508474 NANSQ9NR45 359 aa7.04□□□□□ -1.28
UBE2D3-224ENST00000508474 ASF1BQ9NVP2 202 aa7.04□□□□□ -1.28
UBE2D3-224ENST00000508474 ZDHHC3Q9NYG2 299 aa7.04□□□□□ -1.28
UBE2D3-224ENST00000508474 GNG8Q9UK08 70 aa7.04□□□□□ -1.28
UBE2D3-224ENST00000508474 PCDHGC4Q9Y5F7 938 aa7.04□□□□□ -1.28
UBE2D3-224ENST00000508474 KLK4Q9Y5K2 254 aa7.04□□□□□ -1.28
UBE2D3-224ENST00000508474 TRAV19A0A0A6YYK7 116 aa7.04□□□□□ -1.28
UBE2D3-224ENST00000508474 SMIM35A0A1B0GVV1 85 aa7.04□□□□□ -1.28
UBE2D3-224ENST00000508474 YJEFN3A6XGL0 299 aa7.04□□□□□ -1.28
UBE2D3-224ENST00000508474 OIP5O43482 229 aa7.04□□□□□ -1.28
UBE2D3-224ENST00000508474 MITFO75030 526 aaPredicted RBP7.04□□□□□ -1.28
UBE2D3-224ENST00000508474 SULT1C4O75897 302 aa7.04□□□□□ -1.28
UBE2D3-224ENST00000508474 DBIP07108 87 aaKnown RBP7.04□□□□□ -1.28
UBE2D3-224ENST00000508474 UCHL1P09936 223 aa7.04□□□□□ -1.28
UBE2D3-224ENST00000508474 HSD3B1P14060 373 aa7.04□□□□□ -1.28
UBE2D3-224ENST00000508474 CSNK2A2P19784 350 aaPredicted RBP7.04□□□□□ -1.28
UBE2D3-224ENST00000508474 HSD3B2P26439 372 aa7.04□□□□□ -1.28
UBE2D3-224ENST00000508474 RBMXP38159 391 aaKnown RBP7.04□□□□□ -1.28
UBE2D3-224ENST00000508474 NCBP2P52298 156 aaKnown RBP eCLIP7.04□□□□□ -1.28
UBE2D3-224ENST00000508474 HK3P52790 923 aa7.04□□□□□ -1.28
UBE2D3-224ENST00000508474 CAPZA1P52907 286 aa7.04□□□□□ -1.28
UBE2D3-224ENST00000508474 CLDN8P56748 225 aa7.04□□□□□ -1.28
UBE2D3-224ENST00000508474 ACTBP60709 375 aa7.04□□□□□ -1.28
UBE2D3-224ENST00000508474 RRAS2P62070 204 aaPredicted RBP7.04□□□□□ -1.28
UBE2D3-224ENST00000508474 ACTA2P62736 377 aa7.04□□□□□ -1.28
UBE2D3-224ENST00000508474 ACTG1P63261 375 aa7.04□□□□□ -1.28
UBE2D3-224ENST00000508474 ACTG2P63267 376 aa7.04□□□□□ -1.28
UBE2D3-224ENST00000508474 GXYLT1Q4G148 440 aa7.04□□□□□ -1.28
UBE2D3-224ENST00000508474 FNDC3BQ53EP0 1204 aaKnown RBP7.04□□□□□ -1.28
UBE2D3-224ENST00000508474 NHSL2Q5HYW2 709 aa7.04□□□□□ -1.28
UBE2D3-224ENST00000508474 TMEM205Q6UW68 189 aa7.04□□□□□ -1.28
UBE2D3-224ENST00000508474 WASH2PQ6VEQ5 465 aa7.04□□□□□ -1.28
UBE2D3-224ENST00000508474 RAB11FIP2Q7L804 512 aa7.04□□□□□ -1.28
UBE2D3-224ENST00000508474 ANKRD53Q8N9V6 530 aa7.04□□□□□ -1.28
UBE2D3-224ENST00000508474 CLEC4CQ8WTT0 213 aa7.04□□□□□ -1.28
UBE2D3-224ENST00000508474 OR5B12Q96R08 314 aa7.04□□□□□ -1.28
UBE2D3-224ENST00000508474 GPR20Q99678 358 aa7.04□□□□□ -1.28
UBE2D3-224ENST00000508474 CCM2Q9BSQ5 444 aa7.04□□□□□ -1.28
UBE2D3-224ENST00000508474 THAP7Q9BT49 309 aaPredicted RBP7.04□□□□□ -1.28
UBE2D3-224ENST00000508474 MFFQ9GZY8 342 aa7.04□□□□□ -1.28
UBE2D3-224ENST00000508474 EMC7Q9NPA0 242 aa7.04□□□□□ -1.28
UBE2D3-224ENST00000508474 CFAP97Q9P2B7 532 aa7.04□□□□□ -1.28
UBE2D3-224ENST00000508474 HEMK1Q9Y5R4 338 aaPredicted RBP7.04□□□□□ -1.28
UBE2D3-224ENST00000508474 STYXL1Q9Y6J8 313 aa7.04□□□□□ -1.28
UBE2D3-224ENST00000508474 LMO7Q8WWI1 1683 aa7.04□□□□□ -1.28
UBE2D3-224ENST00000508474 IQCF5A8MTL0 148 aa7.04□□□□□ -1.28
UBE2D3-224ENST00000508474 ARNTLO00327 626 aa7.04□□□□□ -1.28
UBE2D3-224ENST00000508474 GRM6O15303 877 aa7.04□□□□□ -1.28
UBE2D3-224ENST00000508474 SOX30O94993 753 aa7.04□□□□□ -1.28
UBE2D3-224ENST00000508474 IFNA1P01562 189 aa7.04□□□□□ -1.28
UBE2D3-224ENST00000508474 SMIM10L2AP0DMW4 78 aa7.04□□□□□ -1.28
UBE2D3-224ENST00000508474 SMIM10L2BP0DMW5 78 aa7.04□□□□□ -1.28
UBE2D3-224ENST00000508474 GPX3P22352 226 aa7.04□□□□□ -1.28
UBE2D3-224ENST00000508474 ETV3P41162 512 aa7.04□□□□□ -1.28
UBE2D3-224ENST00000508474 VLDLRP98155 873 aa7.04□□□□□ -1.28
UBE2D3-224ENST00000508474 GAS6Q14393 721 aa7.04□□□□□ -1.28
UBE2D3-224ENST00000508474 NDUFAF5Q5TEU4 345 aa7.04□□□□□ -1.28
UBE2D3-224ENST00000508474 GSG1LQ6UXU4 331 aa7.04□□□□□ -1.28
UBE2D3-224ENST00000508474 SAMD7Q7Z3H4 446 aa7.04□□□□□ -1.28
UBE2D3-224ENST00000508474 LRP10Q7Z4F1 713 aa7.04□□□□□ -1.28
UBE2D3-224ENST00000508474 B3GNT8Q7Z7M8 397 aa7.04□□□□□ -1.28
UBE2D3-224ENST00000508474 ZNF584Q8IVC4 421 aa7.04□□□□□ -1.28
UBE2D3-224ENST00000508474 DTWD1Q8N5C7 304 aa7.04□□□□□ -1.28
UBE2D3-224ENST00000508474 COX18Q8N8Q8 333 aa7.04□□□□□ -1.28
UBE2D3-224ENST00000508474 OR2T33Q8NG76 320 aa7.04□□□□□ -1.28
UBE2D3-224ENST00000508474 CASTOR1Q8WTX7 329 aa7.04□□□□□ -1.28
UBE2D3-224ENST00000508474 MOAP1Q96BY2 351 aa7.04□□□□□ -1.28
UBE2D3-224ENST00000508474 CXorf40BQ96DE9 158 aa7.04□□□□□ -1.28
UBE2D3-224ENST00000508474 ARPC5LQ9BPX5 153 aa7.04□□□□□ -1.28
UBE2D3-224ENST00000508474 MRPL17Q9NRX2 175 aaKnown RBP7.04□□□□□ -1.28
UBE2D3-224ENST00000508474 PIGVQ9NUD9 493 aa7.04□□□□□ -1.28
UBE2D3-224ENST00000508474 DCAF13Q9NV06 445 aaKnown RBP7.04□□□□□ -1.28
UBE2D3-224ENST00000508474 NLE1Q9NVX2 485 aaPredicted RBP7.04□□□□□ -1.28
UBE2D3-224ENST00000508474 POLHQ9Y253 713 aa7.04□□□□□ -1.28
UBE2D3-224ENST00000508474 RNF11Q9Y3C5 154 aa7.04□□□□□ -1.28
UBE2D3-224ENST00000508474 GXYLT2A0PJZ3 443 aa7.04□□□□□ -1.28
UBE2D3-224ENST00000508474 OSMP13725 252 aa7.04□□□□□ -1.28
UBE2D3-224ENST00000508474 PPP3CBP16298 524 aa7.04□□□□□ -1.28
UBE2D3-224ENST00000508474 ZNF20P17024 532 aa7.04□□□□□ -1.28
UBE2D3-224ENST00000508474 MAOAP21397 527 aa7.04□□□□□ -1.28
UBE2D3-224ENST00000508474 ALAS2P22557 587 aa7.04□□□□□ -1.28
UBE2D3-224ENST00000508474 CD34P28906 385 aa7.04□□□□□ -1.28
UBE2D3-224ENST00000508474 BRCC3P46736 316 aa7.04□□□□□ -1.28
UBE2D3-224ENST00000508474 NDUFV1P49821 464 aa7.04□□□□□ -1.28
UBE2D3-224ENST00000508474 KCNQ1P51787 676 aa7.04□□□□□ -1.28
UBE2D3-224ENST00000508474 DLX5P56178 289 aa7.04□□□□□ -1.28
UBE2D3-224ENST00000508474 INCA1Q0VD86 236 aa7.04□□□□□ -1.28
UBE2D3-224ENST00000508474 PUM1Q14671 1186 aaKnown RBP eCLIP7.04□□□□□ -1.28
UBE2D3-224ENST00000508474 SLC10A6Q3KNW5 377 aa7.04□□□□□ -1.28
UBE2D3-224ENST00000508474 PRAMEF18Q5VWM3 479 aa7.04□□□□□ -1.28
UBE2D3-224ENST00000508474 TPGS1Q6ZTW0 290 aa7.04□□□□□ -1.28
UBE2D3-224ENST00000508474 CFAP52Q8N1V2 620 aa7.04□□□□□ -1.28
UBE2D3-224ENST00000508474 ACBD7Q8N6N7 88 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms