RNA–Protein interactions for RNA: ENST00000508321.1

HTT-204, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 386 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-204ENST00000508321 EHD3Q9NZN3 535 aa9.67□□□□□ -0.86
HTT-204ENST00000508321 C19orf25Q9UFG5 118 aaPredicted RBP9.67□□□□□ -0.86
HTT-204ENST00000508321 EIF3LQ9Y262 564 aaKnown RBP9.67□□□□□ -0.86
HTT-204ENST00000508321 FARSAQ9Y285 508 aaKnown RBP9.67□□□□□ -0.86
HTT-204ENST00000508321 SSUH2Q9Y2M2 353 aa9.67□□□□□ -0.86
HTT-204ENST00000508321 PTGDR2Q9Y5Y4 395 aa9.67□□□□□ -0.86
HTT-204ENST00000508321 A0A087WV48 116 aa9.66□□□□□ -0.86
HTT-204ENST00000508321 LOC101059948A0A1B0GTJ6 334 aa9.66□□□□□ -0.86
HTT-204ENST00000508321 A0A1W2PQ72 361 aa9.66□□□□□ -0.86
HTT-204ENST00000508321 C1orf226A1L170 272 aa9.66□□□□□ -0.86
HTT-204ENST00000508321 C1QTNF9BB2RNN3 333 aa9.66□□□□□ -0.86
HTT-204ENST00000508321 CYR61O00622 381 aa9.66□□□□□ -0.86
HTT-204ENST00000508321 SDHDO14521 159 aa9.66□□□□□ -0.86
HTT-204ENST00000508321 POLR3GO15318 223 aaPredicted RBP9.66□□□□□ -0.86
HTT-204ENST00000508321 KLK10O43240 276 aa9.66□□□□□ -0.86
HTT-204ENST00000508321 CREG1O75629 220 aa9.66□□□□□ -0.86
HTT-204ENST00000508321 KLF7O75840 302 aaPredicted RBP9.66□□□□□ -0.86
HTT-204ENST00000508321 JUNP05412 331 aaKnown RBP9.66□□□□□ -0.86
HTT-204ENST00000508321 VIMP08670 466 aaKnown RBP9.66□□□□□ -0.86
HTT-204ENST00000508321 ANXA4P09525 319 aaPredicted RBP9.66□□□□□ -0.86
HTT-204ENST00000508321 C1QTNF9P0C862 333 aa9.66□□□□□ -0.86
HTT-204ENST00000508321 KITP10721 976 aa9.66□□□□□ -0.86
HTT-204ENST00000508321 DRD2P14416 443 aa9.66□□□□□ -0.86
HTT-204ENST00000508321 LBPP18428 481 aa9.66□□□□□ -0.86
HTT-204ENST00000508321 MMP11P24347 488 aa9.66□□□□□ -0.86
HTT-204ENST00000508321 HNRNPH2P55795 449 aaKnown RBP9.66□□□□□ -0.86
HTT-204ENST00000508321 SNRPNP63162 240 aaKnown RBP9.66□□□□□ -0.86
HTT-204ENST00000508321 OLR1P78380 273 aa9.66□□□□□ -0.86
HTT-204ENST00000508321 RAE1P78406 368 aaKnown RBP9.66□□□□□ -0.86
HTT-204ENST00000508321 EMX2Q04743 252 aa9.66□□□□□ -0.86
HTT-204ENST00000508321 KLC1Q07866 573 aa9.66□□□□□ -0.86
HTT-204ENST00000508321 RUNX2Q13950 521 aa9.66□□□□□ -0.86
HTT-204ENST00000508321 SERTAD2Q14140 314 aa9.66□□□□□ -0.86
HTT-204ENST00000508321 SSPNQ14714 243 aa9.66□□□□□ -0.86
HTT-204ENST00000508321 SYT16Q17RD7 645 aa9.66□□□□□ -0.86
HTT-204ENST00000508321 GALNTL6Q49A17 601 aa9.66□□□□□ -0.86
HTT-204ENST00000508321 MINDY4Q4G0A6 757 aa9.66□□□□□ -0.86
HTT-204ENST00000508321 C6orf136Q5SQH8 315 aa9.66□□□□□ -0.86
HTT-204ENST00000508321 LCN10Q6JVE6 187 aa9.66□□□□□ -0.86
HTT-204ENST00000508321 NOXRED1Q6NXP6 359 aa9.66□□□□□ -0.86
HTT-204ENST00000508321 FAM199XQ6PEV8 388 aaPredicted RBP9.66□□□□□ -0.86
HTT-204ENST00000508321 SCIMPQ6UWF3 145 aa9.66□□□□□ -0.86
HTT-204ENST00000508321 MTERF4Q7Z6M4 381 aaKnown RBP9.66□□□□□ -0.86
HTT-204ENST00000508321 SCUBE1Q8IWY4 988 aa9.66□□□□□ -0.86
HTT-204ENST00000508321 SAMD14Q8IZD0 417 aaPredicted RBP9.66□□□□□ -0.86
HTT-204ENST00000508321 DTWD1Q8N5C7 304 aa9.66□□□□□ -0.86
HTT-204ENST00000508321 METTL21AQ8WXB1 218 aa9.66□□□□□ -0.86
HTT-204ENST00000508321 TANKQ92844 425 aa9.66□□□□□ -0.86
HTT-204ENST00000508321 CHMP6Q96FZ7 201 aa9.66□□□□□ -0.86
HTT-204ENST00000508321 PEX11GQ96HA9 241 aa9.66□□□□□ -0.86
HTT-204ENST00000508321 C3orf30Q96M34 536 aa9.66□□□□□ -0.86
HTT-204ENST00000508321 MAPKAP1Q9BPZ7 522 aa9.66□□□□□ -0.86
HTT-204ENST00000508321 PELOQ9BRX2 385 aaKnown RBP9.66□□□□□ -0.86
HTT-204ENST00000508321 CCDC28BQ9BUN5 200 aa9.66□□□□□ -0.86
HTT-204ENST00000508321 SORBS1Q9BX66 1292 aaKnown RBP9.66□□□□□ -0.86
HTT-204ENST00000508321 LANCL2Q9NS86 450 aa9.66□□□□□ -0.86
HTT-204ENST00000508321 KCMF1Q9P0J7 381 aa9.66□□□□□ -0.86
HTT-204ENST00000508321 PTRH2Q9Y3E5 179 aaKnown RBP9.66□□□□□ -0.86
HTT-204ENST00000508321 ASB4Q9Y574 426 aa9.66□□□□□ -0.86
HTT-204ENST00000508321 CCDC88CQ9P219 2028 aa9.65□□□□□ -0.86
HTT-204ENST00000508321 IGKV3D-11A0A0A0MRZ8 115 aa9.65□□□□□ -0.86
HTT-204ENST00000508321 ATP6AP2A0A1C7CYW4 349 aa9.65□□□□□ -0.86
HTT-204ENST00000508321 SRRM3A6NNA2 597 aaPredicted RBP9.65□□□□□ -0.86
HTT-204ENST00000508321 IDSB3KWA1 339 aa9.65□□□□□ -0.86
HTT-204ENST00000508321 ZNF195O14628 629 aa9.65□□□□□ -0.86
HTT-204ENST00000508321 PROM1O43490 865 aa9.65□□□□□ -0.86
HTT-204ENST00000508321 PRMT3O60678 531 aa9.65□□□□□ -0.86
HTT-204ENST00000508321 PEX11AO75192 247 aa9.65□□□□□ -0.86
HTT-204ENST00000508321 ATP6AP2O75787 350 aa9.65□□□□□ -0.86
HTT-204ENST00000508321 AIFM1O95831 613 aa9.65□□□□□ -0.86
HTT-204ENST00000508321 B3GALT4O96024 378 aa9.65□□□□□ -0.86
HTT-204ENST00000508321 HEXBP07686 556 aa9.65□□□□□ -0.86
HTT-204ENST00000508321 C8orf89P0DMQ9 161 aa9.65□□□□□ -0.86
HTT-204ENST00000508321 SDC1P18827 310 aa9.65□□□□□ -0.86
HTT-204ENST00000508321 HPCAL1P37235 193 aa9.65□□□□□ -0.86
HTT-204ENST00000508321 TMPRSS3P57727 454 aa9.65□□□□□ -0.86
HTT-204ENST00000508321 C21orf58P58505 322 aa9.65□□□□□ -0.86
HTT-204ENST00000508321 AP2B1P63010 937 aa9.65□□□□□ -0.86
HTT-204ENST00000508321 TERF2Q15554 542 aa9.65□□□□□ -0.86
HTT-204ENST00000508321 TGIF1Q15583 401 aa9.65□□□□□ -0.86
HTT-204ENST00000508321 UGT8Q16880 541 aa9.65□□□□□ -0.86
HTT-204ENST00000508321 DPY19L1Q2PZI1 675 aa9.65□□□□□ -0.86
HTT-204ENST00000508321 VWA2Q5GFL6 755 aa9.65□□□□□ -0.86
HTT-204ENST00000508321 NDUFAF5Q5TEU4 345 aa9.65□□□□□ -0.86
HTT-204ENST00000508321 MFSD4BQ5TF39 518 aa9.65□□□□□ -0.86
HTT-204ENST00000508321 EPGNQ6UW88 154 aa9.65□□□□□ -0.86
HTT-204ENST00000508321 LARP4Q71RC2 724 aaKnown RBP eCLIP9.65□□□□□ -0.86
HTT-204ENST00000508321 SPATA19Q7Z5L4 167 aa9.65□□□□□ -0.86
HTT-204ENST00000508321 SPACA3Q8IXA5 215 aa9.65□□□□□ -0.86
HTT-204ENST00000508321 TMEM132CQ8N3T6 1108 aa9.65□□□□□ -0.86
HTT-204ENST00000508321 FAM47BQ8NA70 645 aa9.65□□□□□ -0.86
HTT-204ENST00000508321 PLPP5Q8NEB5 264 aa9.65□□□□□ -0.86
HTT-204ENST00000508321 CEP70Q8NHQ1 597 aa9.65□□□□□ -0.86
HTT-204ENST00000508321 THAP4Q8WY91 577 aa9.65□□□□□ -0.86
HTT-204ENST00000508321 MTERF3Q96E29 417 aa9.65□□□□□ -0.86
HTT-204ENST00000508321 ZNF317Q96PQ6 595 aaPredicted RBP9.65□□□□□ -0.86
HTT-204ENST00000508321 CSF3RQ99062 836 aa9.65□□□□□ -0.86
HTT-204ENST00000508321 EBPLQ9BY08 206 aa9.65□□□□□ -0.86
HTT-204ENST00000508321 VN1R1Q9GZP7 353 aa9.65□□□□□ -0.86
HTT-204ENST00000508321 SOX17Q9H6I2 414 aaPredicted RBP9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms