RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 SYTL3Q4VX76 610 aa10.37□□□□□ -0.75
PDLIM5-210ENST00000508216 CYP2R1Q6VVX0 501 aa10.37□□□□□ -0.75
PDLIM5-210ENST00000508216 CERS6Q6ZMG9 384 aa10.37□□□□□ -0.75
PDLIM5-210ENST00000508216 KIAA0907Q7Z7F0 614 aaPredicted RBP10.37□□□□□ -0.75
PDLIM5-210ENST00000508216 PDZD9Q8IXQ8 264 aa10.37□□□□□ -0.75
PDLIM5-210ENST00000508216 ADGRF3Q8IZF5 1079 aa10.37□□□□□ -0.75
PDLIM5-210ENST00000508216 PELI3Q8N2H9 469 aa10.37□□□□□ -0.75
PDLIM5-210ENST00000508216 Q8NFD4 153 aa10.37□□□□□ -0.75
PDLIM5-210ENST00000508216 OR2T11Q8NH01 316 aa10.37□□□□□ -0.75
PDLIM5-210ENST00000508216 MAPK15Q8TD08 544 aa10.37□□□□□ -0.75
PDLIM5-210ENST00000508216 STK35Q8TDR2 534 aa10.37□□□□□ -0.75
PDLIM5-210ENST00000508216 ZDHHC1Q8WTX9 485 aa10.37□□□□□ -0.75
PDLIM5-210ENST00000508216 KCTD13Q8WZ19 329 aa10.37□□□□□ -0.75
PDLIM5-210ENST00000508216 SLC35C1Q96A29 364 aa10.37□□□□□ -0.75
PDLIM5-210ENST00000508216 ECHDC3Q96DC8 303 aa10.37□□□□□ -0.75
PDLIM5-210ENST00000508216 FAM210BQ96KR6 192 aa10.37□□□□□ -0.75
PDLIM5-210ENST00000508216 CXorf58Q96LI9 332 aa10.37□□□□□ -0.75
PDLIM5-210ENST00000508216 TAAR1Q96RJ0 339 aa10.37□□□□□ -0.75
PDLIM5-210ENST00000508216 CYP2S1Q96SQ9 504 aa10.37□□□□□ -0.75
PDLIM5-210ENST00000508216 SLC30A3Q99726 388 aa10.37□□□□□ -0.75
PDLIM5-210ENST00000508216 TMPRSS13Q9BYE2 586 aa10.37□□□□□ -0.75
PDLIM5-210ENST00000508216 BCO1Q9HAY6 547 aa10.37□□□□□ -0.75
PDLIM5-210ENST00000508216 CACYBPQ9HB71 228 aaKnown RBP10.37□□□□□ -0.75
PDLIM5-210ENST00000508216 CHRAC1Q9NRG0 131 aa10.37□□□□□ -0.75
PDLIM5-210ENST00000508216 ZSCAN32Q9NX65 697 aa10.37□□□□□ -0.75
PDLIM5-210ENST00000508216 NLGN3Q9NZ94 848 aa10.37□□□□□ -0.75
PDLIM5-210ENST00000508216 C3orf18Q9UK00 162 aa10.37□□□□□ -0.75
PDLIM5-210ENST00000508216 CARHSP1Q9Y2V2 147 aaKnown RBP10.37□□□□□ -0.75
PDLIM5-210ENST00000508216 RAP2CQ9Y3L5 183 aa10.37□□□□□ -0.75
PDLIM5-210ENST00000508216 PUS1Q9Y606 427 aaKnown RBP eCLIP10.37□□□□□ -0.75
PDLIM5-210ENST00000508216 NHSL1Q5SYE7 1610 aa10.37□□□□□ -0.75
PDLIM5-210ENST00000508216 PEAK1Q9H792 1746 aa10.37□□□□□ -0.75
PDLIM5-210ENST00000508216 MEIKINA0A087WXM9 373 aa10.37□□□□□ -0.75
PDLIM5-210ENST00000508216 A0A0A0MRY4 1105 aa10.37□□□□□ -0.75
PDLIM5-210ENST00000508216 PLSCR5A0PG75 271 aa10.37□□□□□ -0.75
PDLIM5-210ENST00000508216 SERTM1A2A2V5 107 aa10.37□□□□□ -0.75
PDLIM5-210ENST00000508216 OR2AT4A6NND4 320 aa10.37□□□□□ -0.75
PDLIM5-210ENST00000508216 SGK494L7N484 410 aa10.37□□□□□ -0.75
PDLIM5-210ENST00000508216 DFFAO00273 331 aa10.37□□□□□ -0.75
PDLIM5-210ENST00000508216 UPK1AO00322 258 aa10.37□□□□□ -0.75
PDLIM5-210ENST00000508216 PRMT5O14744 637 aaPredicted RBP10.37□□□□□ -0.75
PDLIM5-210ENST00000508216 SURF4O15260 269 aa10.37□□□□□ -0.75
PDLIM5-210ENST00000508216 MSH4O15457 936 aa10.37□□□□□ -0.75
PDLIM5-210ENST00000508216 OIP5O43482 229 aa10.37□□□□□ -0.75
PDLIM5-210ENST00000508216 NPHS1O60500 1241 aa10.37□□□□□ -0.75
PDLIM5-210ENST00000508216 RALAP11233 206 aa10.37□□□□□ -0.75
PDLIM5-210ENST00000508216 ENGP17813 658 aa10.37□□□□□ -0.75
PDLIM5-210ENST00000508216 LAG3P18627 525 aa10.37□□□□□ -0.75
PDLIM5-210ENST00000508216 ACO1P21399 889 aaKnown RBP10.37□□□□□ -0.75
PDLIM5-210ENST00000508216 ITPKAP23677 461 aa10.37□□□□□ -0.75
PDLIM5-210ENST00000508216 STOMP27105 288 aa10.37□□□□□ -0.75
PDLIM5-210ENST00000508216 SERPINF1P36955 418 aa10.37□□□□□ -0.75
PDLIM5-210ENST00000508216 MAGEA2P43356 314 aa10.37□□□□□ -0.75
PDLIM5-210ENST00000508216 SRP9P49458 86 aaKnown RBP10.37□□□□□ -0.75
PDLIM5-210ENST00000508216 ATP4BP51164 291 aa10.37□□□□□ -0.75
PDLIM5-210ENST00000508216 RENBPP51606 427 aa10.37□□□□□ -0.75
PDLIM5-210ENST00000508216 TNFRSF17Q02223 184 aa10.37□□□□□ -0.75
PDLIM5-210ENST00000508216 CNTN1Q12860 1018 aa10.37□□□□□ -0.75
PDLIM5-210ENST00000508216 RAB33AQ14088 237 aa10.37□□□□□ -0.75
PDLIM5-210ENST00000508216 KEAP1Q14145 624 aa10.37□□□□□ -0.75
PDLIM5-210ENST00000508216 OPCMLQ14982 345 aa10.37□□□□□ -0.75
PDLIM5-210ENST00000508216 LAPTM4AQ15012 233 aa10.37□□□□□ -0.75
PDLIM5-210ENST00000508216 FNBP1LQ5T0N5 605 aa10.37□□□□□ -0.75
PDLIM5-210ENST00000508216 C9orf64Q5T6V5 341 aa10.37□□□□□ -0.75
PDLIM5-210ENST00000508216 METAP1DQ6UB28 335 aaPredicted RBP10.37□□□□□ -0.75
PDLIM5-210ENST00000508216 CASP12Q6UXS9 341 aa10.37□□□□□ -0.75
PDLIM5-210ENST00000508216 SLC16A14Q7RTX9 510 aa10.37□□□□□ -0.75
PDLIM5-210ENST00000508216 PEG10Q86TG7 708 aaKnown RBP10.37□□□□□ -0.75
PDLIM5-210ENST00000508216 RBM23Q86U06 439 aaKnown RBP10.37□□□□□ -0.75
PDLIM5-210ENST00000508216 LDLRAD3Q86YD5 345 aa10.37□□□□□ -0.75
PDLIM5-210ENST00000508216 MINDY1Q8N5J2 469 aa10.37□□□□□ -0.75
PDLIM5-210ENST00000508216 C1orf52Q8N6N3 182 aaKnown RBP10.37□□□□□ -0.75
PDLIM5-210ENST00000508216 MFSD9Q8NBP5 474 aa10.37□□□□□ -0.75
PDLIM5-210ENST00000508216 GMCL1P1Q8NEA9 526 aa10.37□□□□□ -0.75
PDLIM5-210ENST00000508216 OR5J2Q8NH18 312 aa10.37□□□□□ -0.75
PDLIM5-210ENST00000508216 OR1S1Q8NH92 325 aa10.37□□□□□ -0.75
PDLIM5-210ENST00000508216 HHIPQ96QV1 700 aa10.37□□□□□ -0.75
PDLIM5-210ENST00000508216 OR2M2Q96R28 347 aa10.37□□□□□ -0.75
PDLIM5-210ENST00000508216 MMP19Q99542 508 aa10.37□□□□□ -0.75
PDLIM5-210ENST00000508216 RAD9AQ99638 391 aa10.37□□□□□ -0.75
PDLIM5-210ENST00000508216 CDC6Q99741 560 aa10.37□□□□□ -0.75
PDLIM5-210ENST00000508216 TINF2Q9BSI4 451 aa10.37□□□□□ -0.75
PDLIM5-210ENST00000508216 MED28Q9H204 178 aa10.37□□□□□ -0.75
PDLIM5-210ENST00000508216 SOX17Q9H6I2 414 aaPredicted RBP10.37□□□□□ -0.75
PDLIM5-210ENST00000508216 TLR8Q9NR97 1041 aaKnown RBP10.37□□□□□ -0.75
PDLIM5-210ENST00000508216 SLC9A2Q9UBY0 812 aa10.37□□□□□ -0.75
PDLIM5-210ENST00000508216 ZDHHC8Q9ULC8 765 aa10.37□□□□□ -0.75
PDLIM5-210ENST00000508216 AURKCQ9UQB9 309 aa10.37□□□□□ -0.75
PDLIM5-210ENST00000508216 DDX60LQ5H9U9 1706 aaKnown RBP10.36□□□□□ -0.75
PDLIM5-210ENST00000508216 URADA6NGE7 173 aa10.36□□□□□ -0.75
PDLIM5-210ENST00000508216 B4E171 279 aa10.36□□□□□ -0.75
PDLIM5-210ENST00000508216 GPRIN2O60269 458 aa10.36□□□□□ -0.75
PDLIM5-210ENST00000508216 ENDOD1O94919 500 aa10.36□□□□□ -0.75
PDLIM5-210ENST00000508216 HPP00738 406 aa10.36□□□□□ -0.75
PDLIM5-210ENST00000508216 MT-ND2P03891 347 aa10.36□□□□□ -0.75
PDLIM5-210ENST00000508216 NR3C1P04150 777 aa10.36□□□□□ -0.75
PDLIM5-210ENST00000508216 METTL15P1P0C7V9 234 aa10.36□□□□□ -0.75
PDLIM5-210ENST00000508216 NPR2P20594 1047 aa10.36□□□□□ -0.75
PDLIM5-210ENST00000508216 OR1E1P30953 314 aa10.36□□□□□ -0.75
PDLIM5-210ENST00000508216 THBS4P35443 961 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms