RNA–Protein interactions for RNA: ENST00000506042.5

SQSTM1-210, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 921 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-210ENST00000506042 FAM221AA4D161 298 aa19.51■□□□□ 0.71
SQSTM1-210ENST00000506042 AQP7O14520 342 aa19.51■□□□□ 0.71
SQSTM1-210ENST00000506042 KLK8O60259 260 aa19.51■□□□□ 0.71
SQSTM1-210ENST00000506042 HCN1O60741 890 aa19.51■□□□□ 0.71
SQSTM1-210ENST00000506042 OR6B1O95007 311 aa19.51■□□□□ 0.71
SQSTM1-210ENST00000506042 IGHG3P01860 377 aa19.51■□□□□ 0.71
SQSTM1-210ENST00000506042 TLX1P31314 330 aaPredicted RBP19.51■□□□□ 0.71
SQSTM1-210ENST00000506042 HNRNPH1P31943 449 aaKnown RBP19.51■□□□□ 0.71
SQSTM1-210ENST00000506042 LIM2P55344 173 aa19.51■□□□□ 0.71
SQSTM1-210ENST00000506042 RUNX2Q13950 521 aa19.51■□□□□ 0.71
SQSTM1-210ENST00000506042 PDK4Q16654 411 aa19.51■□□□□ 0.71
SQSTM1-210ENST00000506042 KRTAP21-3Q3LHN1 58 aa19.51■□□□□ 0.71
SQSTM1-210ENST00000506042 TMEM35AQ53FP2 167 aa19.51■□□□□ 0.71
SQSTM1-210ENST00000506042 XKR6Q5GH73 641 aa19.51■□□□□ 0.71
SQSTM1-210ENST00000506042 STEAP4Q687X5 459 aa19.51■□□□□ 0.71
SQSTM1-210ENST00000506042 SULT1C3Q6IMI6 304 aa19.51■□□□□ 0.71
SQSTM1-210ENST00000506042 CHSY3Q70JA7 882 aa19.51■□□□□ 0.71
SQSTM1-210ENST00000506042 CLNKQ7Z7G1 428 aa19.51■□□□□ 0.71
SQSTM1-210ENST00000506042 ZC3HC1Q86WB0 502 aaKnown RBP19.51■□□□□ 0.71
SQSTM1-210ENST00000506042 CCDC71Q8IV32 467 aaPredicted RBP19.51■□□□□ 0.71
SQSTM1-210ENST00000506042 LIX1Q8N485 282 aa19.51■□□□□ 0.71
SQSTM1-210ENST00000506042 MARVELD2Q8N4S9 558 aa19.51■□□□□ 0.71
SQSTM1-210ENST00000506042 RHBDF1Q96CC6 855 aa19.51■□□□□ 0.71
SQSTM1-210ENST00000506042 DERL2Q9GZP9 239 aa19.51■□□□□ 0.71
SQSTM1-210ENST00000506042 DDX47Q9H0S4 455 aaKnown RBP19.51■□□□□ 0.71
SQSTM1-210ENST00000506042 RHOJQ9H4E5 214 aa19.51■□□□□ 0.71
SQSTM1-210ENST00000506042 MS4A12Q9NXJ0 267 aa19.51■□□□□ 0.71
SQSTM1-210ENST00000506042 PHF3Q92576 2039 aaKnown RBP19.51■□□□□ 0.71
SQSTM1-210ENST00000506042 C17orf105B2RV13 164 aa19.5■□□□□ 0.71
SQSTM1-210ENST00000506042 BANF1O75531 89 aa19.5■□□□□ 0.71
SQSTM1-210ENST00000506042 SLC6A12P48065 614 aa19.5■□□□□ 0.71
SQSTM1-210ENST00000506042 HK2P52789 917 aa19.5■□□□□ 0.71
SQSTM1-210ENST00000506042 ATP6V0D1P61421 351 aa19.5■□□□□ 0.71
SQSTM1-210ENST00000506042 RNF4P78317 190 aa19.5■□□□□ 0.71
SQSTM1-210ENST00000506042 POU4F1Q01851 419 aa19.5■□□□□ 0.71
SQSTM1-210ENST00000506042 TGFBIQ15582 683 aa19.5■□□□□ 0.71
SQSTM1-210ENST00000506042 TSNQ15631 228 aaKnown RBP19.5■□□□□ 0.71
SQSTM1-210ENST00000506042 AP5B1Q2VPB7 878 aa19.5■□□□□ 0.71
SQSTM1-210ENST00000506042 ADPRMQ3LIE5 342 aa19.5■□□□□ 0.71
SQSTM1-210ENST00000506042 GPSM1Q86YR5 675 aa19.5■□□□□ 0.71
SQSTM1-210ENST00000506042 SPNS2Q8IVW8 549 aa19.5■□□□□ 0.71
SQSTM1-210ENST00000506042 RBM18Q96H35 190 aaKnown RBP19.5■□□□□ 0.71
SQSTM1-210ENST00000506042 PELOQ9BRX2 385 aaKnown RBP19.5■□□□□ 0.71
SQSTM1-210ENST00000506042 TTYH2Q9BSA4 534 aa19.5■□□□□ 0.71
SQSTM1-210ENST00000506042 UCK2Q9BZX2 261 aa19.5■□□□□ 0.71
SQSTM1-210ENST00000506042 PHACTR1Q9C0D0 580 aa19.5■□□□□ 0.71
SQSTM1-210ENST00000506042 NPDC1Q9NQX5 325 aaPredicted RBP19.5■□□□□ 0.71
SQSTM1-210ENST00000506042 PNPLA3Q9NST1 481 aa19.5■□□□□ 0.71
SQSTM1-210ENST00000506042 ZNF223Q9UK11 482 aaPredicted RBP19.5■□□□□ 0.71
SQSTM1-210ENST00000506042 SNX12Q9UMY4 172 aa19.5■□□□□ 0.71
SQSTM1-210ENST00000506042 PCDHGB3Q9Y5G1 929 aa19.5■□□□□ 0.71
SQSTM1-210ENST00000506042 HCFC1P51610 2035 aa19.49■□□□□ 0.71
SQSTM1-210ENST00000506042 NCF1BA6NI72 391 aaPredicted RBP19.49■□□□□ 0.71
SQSTM1-210ENST00000506042 NCF1CA8MVU1 366 aaPredicted RBP19.49■□□□□ 0.71
SQSTM1-210ENST00000506042 STK16O75716 305 aa19.49■□□□□ 0.71
SQSTM1-210ENST00000506042 NADKO95544 446 aaPredicted RBP19.49■□□□□ 0.71
SQSTM1-210ENST00000506042 NCF1P14598 390 aaPredicted RBP19.49■□□□□ 0.71
SQSTM1-210ENST00000506042 CERS1P27544 350 aa19.49■□□□□ 0.71
SQSTM1-210ENST00000506042 KCNJ2P63252 427 aa19.49■□□□□ 0.71
SQSTM1-210ENST00000506042 PHEXP78562 749 aa19.49■□□□□ 0.71
SQSTM1-210ENST00000506042 PLIN5Q00G26 463 aa19.49■□□□□ 0.71
SQSTM1-210ENST00000506042 DR1Q01658 176 aa19.49■□□□□ 0.71
SQSTM1-210ENST00000506042 IRF8Q02556 426 aa19.49■□□□□ 0.71
SQSTM1-210ENST00000506042 TFF3Q07654 80 aa19.49■□□□□ 0.71
SQSTM1-210ENST00000506042 MPEG1Q2M385 716 aa19.49■□□□□ 0.71
SQSTM1-210ENST00000506042 MSS51Q4VC12 460 aa19.49■□□□□ 0.71
SQSTM1-210ENST00000506042 HP1BP3Q5SSJ5 553 aaPredicted RBP19.49■□□□□ 0.71
SQSTM1-210ENST00000506042 C1orf185Q5T7R7 199 aa19.49■□□□□ 0.71
SQSTM1-210ENST00000506042 SLC22A10Q63ZE4 541 aa19.49■□□□□ 0.71
SQSTM1-210ENST00000506042 ABHD17CQ6PCB6 329 aa19.49■□□□□ 0.71
SQSTM1-210ENST00000506042 TRILQ7L0X0 811 aa19.49■□□□□ 0.71
SQSTM1-210ENST00000506042 FBXW8Q8N3Y1 598 aa19.49■□□□□ 0.71
SQSTM1-210ENST00000506042 SLC15A4Q8N697 577 aa19.49■□□□□ 0.71
SQSTM1-210ENST00000506042 BBOF1Q8ND07 529 aa19.49■□□□□ 0.71
SQSTM1-210ENST00000506042 OR5M9Q8NGP3 310 aa19.49■□□□□ 0.71
SQSTM1-210ENST00000506042 QRFPRQ96P65 431 aa19.49■□□□□ 0.71
SQSTM1-210ENST00000506042 DGAT2Q96PD7 388 aa19.49■□□□□ 0.71
SQSTM1-210ENST00000506042 DNAJB12Q9NXW2 375 aaKnown RBP19.49■□□□□ 0.71
SQSTM1-210ENST00000506042 CD274Q9NZQ7 290 aa19.49■□□□□ 0.71
SQSTM1-210ENST00000506042 ADGRE2Q9UHX3 823 aa19.49■□□□□ 0.71
SQSTM1-210ENST00000506042 TEX264Q9Y6I9 313 aa19.49■□□□□ 0.71
SQSTM1-210ENST00000506042 CSMD1Q96PZ7 3565 aa19.49■□□□□ 0.71
SQSTM1-210ENST00000506042 TRGV5A0A0B4J1U4 118 aa19.48■□□□□ 0.71
SQSTM1-210ENST00000506042 A0A1B0GVC2 190 aa19.48■□□□□ 0.71
SQSTM1-210ENST00000506042 HSPB2A8KAH6 182 aa19.48■□□□□ 0.71
SQSTM1-210ENST00000506042 CAPN14A8MX76 684 aa19.48■□□□□ 0.71
SQSTM1-210ENST00000506042 CYR61O00622 381 aa19.48■□□□□ 0.71
SQSTM1-210ENST00000506042 CD99P14209 185 aa19.48■□□□□ 0.71
SQSTM1-210ENST00000506042 MAGEA5P43359 124 aa19.48■□□□□ 0.71
SQSTM1-210ENST00000506042 HSPB2Q16082 182 aa19.48■□□□□ 0.71
SQSTM1-210ENST00000506042 HYAL4Q2M3T9 481 aa19.48■□□□□ 0.71
SQSTM1-210ENST00000506042 TRMT10BQ6PF06 316 aaKnown RBP19.48■□□□□ 0.71
SQSTM1-210ENST00000506042 SLC29A4Q7RTT9 530 aa19.48■□□□□ 0.71
SQSTM1-210ENST00000506042 TMEM251Q8N6I4 163 aa19.48■□□□□ 0.71
SQSTM1-210ENST00000506042 GOT1L1Q8NHS2 421 aaPredicted RBP19.48■□□□□ 0.71
SQSTM1-210ENST00000506042 SLC2A12Q8TD20 617 aa19.48■□□□□ 0.71
SQSTM1-210ENST00000506042 POLDIP3Q9BY77 421 aaKnown RBP19.48■□□□□ 0.71
SQSTM1-210ENST00000506042 DEPPQ9NTK1 212 aa19.48■□□□□ 0.71
SQSTM1-210ENST00000506042 QPCTLQ9NXS2 382 aa19.48■□□□□ 0.71
SQSTM1-210ENST00000506042 ALKBH4Q9NXW9 302 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms