RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 CLIP4Q8N3C7 705 aa13.46□□□□□ -0.25
TCOF1-207ENST00000504761 PEX11GQ96HA9 241 aa13.46□□□□□ -0.25
TCOF1-207ENST00000504761 SH3YL1Q96HL8 342 aaPredicted RBP13.46□□□□□ -0.25
TCOF1-207ENST00000504761 OR51I1Q9H343 314 aa13.46□□□□□ -0.25
TCOF1-207ENST00000504761 RMI1Q9H9A7 625 aa13.46□□□□□ -0.25
TCOF1-207ENST00000504761 TMEM184CQ9NVA4 438 aa13.46□□□□□ -0.25
TCOF1-207ENST00000504761 MAP10Q9P2G4 905 aa13.46□□□□□ -0.25
TCOF1-207ENST00000504761 MKLN1Q9UL63 735 aa13.46□□□□□ -0.25
TCOF1-207ENST00000504761 DMTF1Q9Y222 760 aa13.46□□□□□ -0.25
TCOF1-207ENST00000504761 ACADLP28330 430 aa13.46□□□□□ -0.25
TCOF1-207ENST00000504761 OXTRP30559 389 aa13.46□□□□□ -0.25
TCOF1-207ENST00000504761 CHCHD4Q8N4Q1 142 aa13.46□□□□□ -0.25
TCOF1-207ENST00000504761 FRMD1Q8N878 549 aa13.46□□□□□ -0.25
TCOF1-207ENST00000504761 THAP3Q8WTV1 239 aaPredicted RBP13.46□□□□□ -0.25
TCOF1-207ENST00000504761 DEPDC7Q96QD5 511 aa13.46□□□□□ -0.25
TCOF1-207ENST00000504761 CD320Q9NPF0 282 aa13.46□□□□□ -0.25
TCOF1-207ENST00000504761 PCDHGA12O60330 932 aa13.46□□□□□ -0.26
TCOF1-207ENST00000504761 HCN1O60741 890 aa13.46□□□□□ -0.26
TCOF1-207ENST00000504761 ARMC4Q5T2S8 1044 aa13.46□□□□□ -0.26
TCOF1-207ENST00000504761 C1orf189Q5VU69 101 aa13.46□□□□□ -0.26
TCOF1-207ENST00000504761 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.46□□□□□ -0.269e-8■□□□□ 9.8
TCOF1-207ENST00000504761 TBL1XR1Q9BZK7 514 aa13.46□□□□□ -0.26
TCOF1-207ENST00000504761 EXO5Q9H790 373 aa13.46□□□□□ -0.26
TCOF1-207ENST00000504761 Q9N2J8 555 aa13.46□□□□□ -0.26
TCOF1-207ENST00000504761 SLC35C2Q9NQQ7 365 aa13.46□□□□□ -0.26
TCOF1-207ENST00000504761 MKL2Q9ULH7 1088 aa13.46□□□□□ -0.26
TCOF1-207ENST00000504761 C1orf226A1L170 272 aa13.45□□□□□ -0.26
TCOF1-207ENST00000504761 FZD6O60353 706 aa13.45□□□□□ -0.26
TCOF1-207ENST00000504761 IFNGP01579 166 aa13.45□□□□□ -0.26
TCOF1-207ENST00000504761 GABRA3P34903 492 aa13.45□□□□□ -0.26
TCOF1-207ENST00000504761 IGFALSP35858 605 aa13.45□□□□□ -0.26
TCOF1-207ENST00000504761 RPS15AP62244 130 aaKnown RBP13.45□□□□□ -0.26
TCOF1-207ENST00000504761 NADK2Q4G0N4 442 aa13.45□□□□□ -0.26
TCOF1-207ENST00000504761 C1orf53Q5VUE5 145 aa13.45□□□□□ -0.26
TCOF1-207ENST00000504761 CARM1Q86X55 608 aa13.45□□□□□ -0.26
TCOF1-207ENST00000504761 AVL9Q8NBF6 648 aa13.45□□□□□ -0.26
TCOF1-207ENST00000504761 ZNF671Q8TAW3 534 aa13.45□□□□□ -0.26
TCOF1-207ENST00000504761 ZDHHC12Q96GR4 267 aa13.45□□□□□ -0.26
TCOF1-207ENST00000504761 TBX5Q99593 518 aa13.45□□□□□ -0.26
TCOF1-207ENST00000504761 PRTFDC1Q9NRG1 225 aa13.45□□□□□ -0.26
TCOF1-207ENST00000504761 DAPK2Q9UIK4 370 aa13.45□□□□□ -0.26
TCOF1-207ENST00000504761 POM121BA6NF01 834 aa13.45□□□□□ -0.26
TCOF1-207ENST00000504761 OR2B3O76000 313 aa13.45□□□□□ -0.26
TCOF1-207ENST00000504761 MRPS21P82921 87 aaKnown RBP13.45□□□□□ -0.26
TCOF1-207ENST00000504761 TLR1Q15399 786 aa13.45□□□□□ -0.26
TCOF1-207ENST00000504761 FAM214AQ32MH5 1076 aa13.45□□□□□ -0.26
TCOF1-207ENST00000504761 FAM91A1Q658Y4 838 aa13.45□□□□□ -0.26
TCOF1-207ENST00000504761 FIGNL1Q6PIW4 674 aa13.45□□□□□ -0.26
TCOF1-207ENST00000504761 TEX37Q96LM6 180 aa13.45□□□□□ -0.26
TCOF1-207ENST00000504761 SOCS2O14508 198 aa13.45□□□□□ -0.26
TCOF1-207ENST00000504761 UGDHO60701 494 aa13.45□□□□□ -0.26
TCOF1-207ENST00000504761 CSTF2P33240 577 aaKnown RBP eCLIP13.45□□□□□ -0.26
TCOF1-207ENST00000504761 MRPS15P82914 257 aaKnown RBP13.45□□□□□ -0.26
TCOF1-207ENST00000504761 SMPDL3BQ92485 455 aa13.45□□□□□ -0.26
TCOF1-207ENST00000504761 SLC25A36Q96CQ1 311 aa13.45□□□□□ -0.26
TCOF1-207ENST00000504761 ACTR10Q9NZ32 417 aa13.45□□□□□ -0.26
TCOF1-207ENST00000504761 EHD3Q9NZN3 535 aa13.45□□□□□ -0.26
TCOF1-207ENST00000504761 A0A1B0GTL3 188 aa13.45□□□□□ -0.26
TCOF1-207ENST00000504761 SBK3P0C264 359 aa13.45□□□□□ -0.26
TCOF1-207ENST00000504761 HRH2P25021 359 aa13.45□□□□□ -0.26
TCOF1-207ENST00000504761 SELPLGQ14242 412 aa13.45□□□□□ -0.26
TCOF1-207ENST00000504761 COQ5Q5HYK3 327 aa13.45□□□□□ -0.26
TCOF1-207ENST00000504761 PDZK1Q5T2W1 519 aa13.45□□□□□ -0.26
TCOF1-207ENST00000504761 PACRGLQ8N7B6 248 aa13.45□□□□□ -0.26
TCOF1-207ENST00000504761 PHOSPHO1Q8TCT1 267 aa13.45□□□□□ -0.26
TCOF1-207ENST00000504761 STON2Q8WXE9 905 aa13.45□□□□□ -0.26
TCOF1-207ENST00000504761 HDHD2Q9H0R4 259 aa13.45□□□□□ -0.26
TCOF1-207ENST00000504761 TM9SF3Q9HD45 589 aa13.45□□□□□ -0.26
TCOF1-207ENST00000504761 LYARQ9NX58 379 aaKnown RBP13.45□□□□□ -0.26
TCOF1-207ENST00000504761 TMEM181Q9P2C4 612 aa13.45□□□□□ -0.26
TCOF1-207ENST00000504761 IKZF2Q9UKS7 526 aa13.45□□□□□ -0.26
TCOF1-207ENST00000504761 TOR1BO14657 336 aa13.44□□□□□ -0.26
TCOF1-207ENST00000504761 XPNPEP2O43895 674 aa13.44□□□□□ -0.26
TCOF1-207ENST00000504761 CXCL12P48061 93 aa13.44□□□□□ -0.26
TCOF1-207ENST00000504761 CSNK1EP49674 416 aaKnown RBP13.44□□□□□ -0.26
TCOF1-207ENST00000504761 TDGQ13569 410 aa13.44□□□□□ -0.26
TCOF1-207ENST00000504761 NPTX1Q15818 432 aa13.44□□□□□ -0.26
TCOF1-207ENST00000504761 C5orf22Q49AR2 442 aa13.44□□□□□ -0.26
TCOF1-207ENST00000504761 LCTLQ6UWM7 567 aa13.44□□□□□ -0.26
TCOF1-207ENST00000504761 TMEM126BQ8IUX1 230 aa13.44□□□□□ -0.26
TCOF1-207ENST00000504761 HS3ST5Q8IZT8 346 aa13.44□□□□□ -0.26
TCOF1-207ENST00000504761 SLC29A1Q99808 456 aa13.44□□□□□ -0.26
TCOF1-207ENST00000504761 ZFYVE21Q9BQ24 234 aa13.44□□□□□ -0.26
TCOF1-207ENST00000504761 DOHHQ9BU89 302 aa13.44□□□□□ -0.26
TCOF1-207ENST00000504761 BHLHE41Q9C0J9 482 aaPredicted RBP13.44□□□□□ -0.26
TCOF1-207ENST00000504761 SLC6A16Q9GZN6 736 aa13.44□□□□□ -0.26
TCOF1-207ENST00000504761 FGF22Q9HCT0 170 aa13.44□□□□□ -0.26
TCOF1-207ENST00000504761 ABCB10Q9NRK6 738 aa13.44□□□□□ -0.26
TCOF1-207ENST00000504761 MS4A12Q9NXJ0 267 aa13.44□□□□□ -0.26
TCOF1-207ENST00000504761 ANHXE9PGG2 379 aa13.44□□□□□ -0.26
TCOF1-207ENST00000504761 MFN2O95140 757 aa13.44□□□□□ -0.26
TCOF1-207ENST00000504761 PROS1P07225 676 aa13.44□□□□□ -0.26
TCOF1-207ENST00000504761 GGT1P19440 569 aa13.44□□□□□ -0.26
TCOF1-207ENST00000504761 CPOXP36551 454 aa13.44□□□□□ -0.26
TCOF1-207ENST00000504761 TNFRSF4P43489 277 aa13.44□□□□□ -0.26
TCOF1-207ENST00000504761 MXD1Q05195 221 aa13.44□□□□□ -0.26
TCOF1-207ENST00000504761 PRDX1Q06830 199 aaKnown RBP13.44□□□□□ -0.26
TCOF1-207ENST00000504761 DCTN2Q13561 401 aaKnown RBP13.44□□□□□ -0.26
TCOF1-207ENST00000504761 ENPP2Q13822 863 aa13.44□□□□□ -0.26
TCOF1-207ENST00000504761 ATP6AP1Q15904 470 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms