RNA–Protein interactions for RNA: ENST00000504211.5

UBE2D3-217, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2 BASIC

Gene UBE2D3, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-217ENST00000504211 ESR2Q92731 530 aa5□□□□□ -1.61
UBE2D3-217ENST00000504211 FAM162AQ96A26 154 aa5□□□□□ -1.61
UBE2D3-217ENST00000504211 DGCR6LQ9BY27 220 aa5□□□□□ -1.61
UBE2D3-217ENST00000504211 CLSTN2Q9H4D0 955 aa5□□□□□ -1.61
UBE2D3-217ENST00000504211 EGLN3Q9H6Z9 239 aa5□□□□□ -1.61
UBE2D3-217ENST00000504211 PHPT1Q9NRX4 125 aaPredicted RBP5□□□□□ -1.61
UBE2D3-217ENST00000504211 NAP1L2Q9ULW6 460 aaPredicted RBP5□□□□□ -1.61
UBE2D3-217ENST00000504211 PRSS21Q9Y6M0 314 aa5□□□□□ -1.61
UBE2D3-217ENST00000504211 ARFGEF1Q9Y6D6 1849 aa5□□□□□ -1.61
UBE2D3-217ENST00000504211 MEX3AA1L020 520 aaKnown RBP4.99□□□□□ -1.61
UBE2D3-217ENST00000504211 PRKAB2O43741 272 aa4.99□□□□□ -1.61
UBE2D3-217ENST00000504211 FCGR3BO75015 233 aa4.99□□□□□ -1.61
UBE2D3-217ENST00000504211 CEACAM4O75871 244 aa4.99□□□□□ -1.61
UBE2D3-217ENST00000504211 BBOX1O75936 387 aa4.99□□□□□ -1.61
UBE2D3-217ENST00000504211 ZSCAN5DPP0CG00 497 aa4.99□□□□□ -1.61
UBE2D3-217ENST00000504211 CALM1P0DP23 149 aa4.99□□□□□ -1.61
UBE2D3-217ENST00000504211 CALM2P0DP24 149 aa4.99□□□□□ -1.61
UBE2D3-217ENST00000504211 CALM3P0DP25 149 aa4.99□□□□□ -1.61
UBE2D3-217ENST00000504211 U2AF2P26368 475 aaKnown RBP eCLIP4.99□□□□□ -1.612e-10■■■■□ 21.8
UBE2D3-217ENST00000504211 HOXC13P31276 330 aa4.99□□□□□ -1.61
UBE2D3-217ENST00000504211 SFTPDP35247 375 aa4.99□□□□□ -1.61
UBE2D3-217ENST00000504211 TSFMP43897 325 aaKnown RBP4.99□□□□□ -1.61
UBE2D3-217ENST00000504211 DCDC1P59894 354 aa4.99□□□□□ -1.61
UBE2D3-217ENST00000504211 PTENP60484 403 aa4.99□□□□□ -1.61
UBE2D3-217ENST00000504211 GSTO1P78417 241 aa4.99□□□□□ -1.61
UBE2D3-217ENST00000504211 TMEM132DQ14C87 1099 aa4.99□□□□□ -1.61
UBE2D3-217ENST00000504211 KRTAP27-1Q3LI81 207 aa4.99□□□□□ -1.61
UBE2D3-217ENST00000504211 PRR5LQ6MZQ0 368 aa4.99□□□□□ -1.61
UBE2D3-217ENST00000504211 BTNL8Q6UX41 500 aa4.99□□□□□ -1.61
UBE2D3-217ENST00000504211 TMEM182Q6ZP80 229 aaPredicted RBP4.99□□□□□ -1.61
UBE2D3-217ENST00000504211 SPATA21Q7Z572 469 aa4.99□□□□□ -1.61
UBE2D3-217ENST00000504211 GPR141Q7Z602 305 aa4.99□□□□□ -1.61
UBE2D3-217ENST00000504211 ZSCAN30Q86W11 494 aa4.99□□□□□ -1.61
UBE2D3-217ENST00000504211 LINC00301Q8NCQ3 95 aa4.99□□□□□ -1.61
UBE2D3-217ENST00000504211 OR5T2Q8NGG2 359 aa4.99□□□□□ -1.61
UBE2D3-217ENST00000504211 ZNF519Q8TB69 540 aa4.99□□□□□ -1.61
UBE2D3-217ENST00000504211 ZNF689Q96CS4 500 aaPredicted RBP4.99□□□□□ -1.61
UBE2D3-217ENST00000504211 FAM218AQ96MZ4 157 aa4.99□□□□□ -1.61
UBE2D3-217ENST00000504211 INTS14Q96SY0 518 aa4.99□□□□□ -1.61
UBE2D3-217ENST00000504211 CRNKL1Q9BZJ0 848 aaKnown RBP4.99□□□□□ -1.61
UBE2D3-217ENST00000504211 TNMDQ9H2S6 317 aa4.99□□□□□ -1.61
UBE2D3-217ENST00000504211 RIMS4Q9H426 269 aaPredicted RBP4.99□□□□□ -1.61
UBE2D3-217ENST00000504211 MED20Q9H944 212 aa4.99□□□□□ -1.61
UBE2D3-217ENST00000504211 RBM28Q9NW13 759 aaKnown RBP4.99□□□□□ -1.61
UBE2D3-217ENST00000504211 SELENOKQ9Y6D0 94 aa4.99□□□□□ -1.61
UBE2D3-217ENST00000504211 TRBV4-1A0A0J9YWV2 114 aa4.98□□□□□ -1.61
UBE2D3-217ENST00000504211 A0A1B0GU03 582 aa4.98□□□□□ -1.61
UBE2D3-217ENST00000504211 ARHGEF37A1IGU5 675 aa4.98□□□□□ -1.61
UBE2D3-217ENST00000504211 MPTX1A8MV57 137 aa4.98□□□□□ -1.61
UBE2D3-217ENST00000504211 H7C423 109 aa4.98□□□□□ -1.61
UBE2D3-217ENST00000504211 FLRT2O43155 660 aa4.98□□□□□ -1.61
UBE2D3-217ENST00000504211 PPIP5K2O43314 1243 aa4.98□□□□□ -1.61
UBE2D3-217ENST00000504211 DEXIO95424 95 aa4.98□□□□□ -1.61
UBE2D3-217ENST00000504211 DUS4LO95620 317 aaKnown RBP4.98□□□□□ -1.61
UBE2D3-217ENST00000504211 IGHEP01854 428 aa4.98□□□□□ -1.61
UBE2D3-217ENST00000504211 TPM3P06753 285 aa4.98□□□□□ -1.61
UBE2D3-217ENST00000504211 YES1P07947 543 aa4.98□□□□□ -1.61
UBE2D3-217ENST00000504211 DUTP33316 252 aaKnown RBP4.98□□□□□ -1.61
UBE2D3-217ENST00000504211 SOX3P41225 446 aa4.98□□□□□ -1.61
UBE2D3-217ENST00000504211 IRX4P78413 519 aa4.98□□□□□ -1.61
UBE2D3-217ENST00000504211 MECOMQ03112 1051 aa4.98□□□□□ -1.61
UBE2D3-217ENST00000504211 IL10RBQ08334 325 aa4.98□□□□□ -1.61
UBE2D3-217ENST00000504211 MTF1Q14872 753 aa4.98□□□□□ -1.61
UBE2D3-217ENST00000504211 E2F5Q15329 346 aa4.98□□□□□ -1.61
UBE2D3-217ENST00000504211 CYB5D1Q6P9G0 228 aa4.98□□□□□ -1.61
UBE2D3-217ENST00000504211 SASS6Q6UVJ0 657 aa4.98□□□□□ -1.61
UBE2D3-217ENST00000504211 PRSS55Q6UWB4 352 aaPredicted RBP4.98□□□□□ -1.61
UBE2D3-217ENST00000504211 CCDC73Q6ZRK6 1079 aa4.98□□□□□ -1.61
UBE2D3-217ENST00000504211 IQCA1Q86XH1 822 aa4.98□□□□□ -1.61
UBE2D3-217ENST00000504211 GBP7Q8N8V2 638 aaPredicted RBP4.98□□□□□ -1.61
UBE2D3-217ENST00000504211 CCDC63Q8NA47 563 aa4.98□□□□□ -1.61
UBE2D3-217ENST00000504211 SDR42E1Q8WUS8 393 aa4.98□□□□□ -1.61
UBE2D3-217ENST00000504211 ST6GALNAC6Q969X2 333 aa4.98□□□□□ -1.61
UBE2D3-217ENST00000504211 C2orf48Q96LS8 159 aa4.98□□□□□ -1.61
UBE2D3-217ENST00000504211 OVOL2Q9BRP0 275 aa4.98□□□□□ -1.61
UBE2D3-217ENST00000504211 TRIM51Q9BSJ1 452 aa4.98□□□□□ -1.61
UBE2D3-217ENST00000504211 UBAC1Q9BSL1 405 aa4.98□□□□□ -1.61
UBE2D3-217ENST00000504211 HOXD1Q9GZZ0 328 aa4.98□□□□□ -1.61
UBE2D3-217ENST00000504211 RRAGDQ9NQL2 400 aaPredicted RBP4.98□□□□□ -1.61
UBE2D3-217ENST00000504211 IARS2Q9NSE4 1012 aaKnown RBP4.98□□□□□ -1.61
UBE2D3-217ENST00000504211 PANK4Q9NVE7 773 aa4.98□□□□□ -1.61
UBE2D3-217ENST00000504211 TBC1D13Q9NVG8 400 aa4.98□□□□□ -1.61
UBE2D3-217ENST00000504211 NOL7Q9UMY1 257 aaKnown RBP4.98□□□□□ -1.61
UBE2D3-217ENST00000504211 CSNK1G3Q9Y6M4 447 aa4.98□□□□□ -1.61
UBE2D3-217ENST00000504211 ROBO3Q96MS0 1386 aa4.98□□□□□ -1.61
UBE2D3-217ENST00000504211 KIF13BQ9NQT8 1826 aa4.97□□□□□ -1.61
UBE2D3-217ENST00000504211 KPNA7A9QM74 516 aa4.97□□□□□ -1.61
UBE2D3-217ENST00000504211 TMEM150CB9EJG8 249 aa4.97□□□□□ -1.61
UBE2D3-217ENST00000504211 WDR46O15213 610 aaKnown RBP4.97□□□□□ -1.61
UBE2D3-217ENST00000504211 RANBP6O60518 1105 aaKnown RBP4.97□□□□□ -1.61
UBE2D3-217ENST00000504211 KINO60870 393 aaKnown RBP4.97□□□□□ -1.61
UBE2D3-217ENST00000504211 MMP1P03956 469 aa4.97□□□□□ -1.61
UBE2D3-217ENST00000504211 VIMP08670 466 aaKnown RBP4.97□□□□□ -1.61
UBE2D3-217ENST00000504211 CMA1P23946 247 aa4.97□□□□□ -1.61
UBE2D3-217ENST00000504211 MSNP26038 577 aaKnown RBP4.97□□□□□ -1.61
UBE2D3-217ENST00000504211 PRKCIP41743 596 aa4.97□□□□□ -1.61
UBE2D3-217ENST00000504211 DYNLL1P63167 89 aaKnown RBP4.97□□□□□ -1.61
UBE2D3-217ENST00000504211 STK38Q15208 465 aa4.97□□□□□ -1.61
UBE2D3-217ENST00000504211 LCE1FQ5T754 118 aa4.97□□□□□ -1.61
UBE2D3-217ENST00000504211 OR4C11Q6IEV9 310 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms