RNA–Protein interactions for RNA: ENST00000504078.1

USP46-205, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 4

Gene USP46, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-205ENST00000504078 LRRC3CA6NJW4 275 aa3.34□□□□□ -1.87
USP46-205ENST00000504078 MAGEB17A8MXT2 336 aa3.34□□□□□ -1.87
USP46-205ENST00000504078 HACD1B0YJ81 288 aa3.34□□□□□ -1.87
USP46-205ENST00000504078 H0YIG0 161 aa3.34□□□□□ -1.87
USP46-205ENST00000504078 QSOX1O00391 747 aa3.34□□□□□ -1.87
USP46-205ENST00000504078 AQP7O14520 342 aa3.34□□□□□ -1.87
USP46-205ENST00000504078 DVL2O14641 736 aa3.34□□□□□ -1.87
USP46-205ENST00000504078 PRMT5O14744 637 aaPredicted RBP3.34□□□□□ -1.87
USP46-205ENST00000504078 BCKDKO14874 412 aa3.34□□□□□ -1.87
USP46-205ENST00000504078 ARHGEF9O43307 516 aa3.34□□□□□ -1.87
USP46-205ENST00000504078 CHST10O43529 356 aa3.34□□□□□ -1.87
USP46-205ENST00000504078 PSTPIP1O43586 416 aa3.34□□□□□ -1.87
USP46-205ENST00000504078 ZNF354AO60765 605 aaPredicted RBP3.34□□□□□ -1.87
USP46-205ENST00000504078 WDR1O75083 606 aa3.34□□□□□ -1.87
USP46-205ENST00000504078 STK10O94804 968 aaKnown RBP3.34□□□□□ -1.87
USP46-205ENST00000504078 CCNDBP1O95273 360 aa3.34□□□□□ -1.87
USP46-205ENST00000504078 ESR1P03372 595 aa3.34□□□□□ -1.87
USP46-205ENST00000504078 GSTM1P09488 218 aa3.34□□□□□ -1.87
USP46-205ENST00000504078 RFPL3SP0C7P2 107 aa3.34□□□□□ -1.87
USP46-205ENST00000504078 RBP3P10745 1247 aa3.34□□□□□ -1.87
USP46-205ENST00000504078 ERGP11308 486 aa3.34□□□□□ -1.87
USP46-205ENST00000504078 IMPA1P29218 277 aa3.34□□□□□ -1.87
USP46-205ENST00000504078 FMO4P31512 558 aa3.34□□□□□ -1.87
USP46-205ENST00000504078 CCKARP32238 428 aa3.34□□□□□ -1.87
USP46-205ENST00000504078 TRHRP34981 398 aaPredicted RBP3.34□□□□□ -1.87
USP46-205ENST00000504078 NR2C2P49116 596 aa3.34□□□□□ -1.87
USP46-205ENST00000504078 PTH2RP49190 550 aa3.34□□□□□ -1.87
USP46-205ENST00000504078 HNRNPFP52597 415 aaKnown RBP3.34□□□□□ -1.87
USP46-205ENST00000504078 RAB8AP61006 207 aa3.34□□□□□ -1.87
USP46-205ENST00000504078 ID2Q02363 134 aa3.34□□□□□ -1.87
USP46-205ENST00000504078 FOXF2Q12947 444 aa3.34□□□□□ -1.87
USP46-205ENST00000504078 TNK1Q13470 666 aa3.34□□□□□ -1.87
USP46-205ENST00000504078 KLHL38Q2WGJ6 581 aa3.34□□□□□ -1.87
USP46-205ENST00000504078 FASTKD1Q53R41 847 aaKnown RBP3.34□□□□□ -1.87
USP46-205ENST00000504078 XKR6Q5GH73 641 aa3.34□□□□□ -1.87
USP46-205ENST00000504078 TSTD2Q5T7W7 516 aa3.34□□□□□ -1.87
USP46-205ENST00000504078 RNF187Q5TA31 235 aaPredicted RBP3.34□□□□□ -1.87
USP46-205ENST00000504078 RIPPLY2Q5TAB7 128 aa3.34□□□□□ -1.87
USP46-205ENST00000504078 MEI1Q5TIA1 1274 aa3.34□□□□□ -1.87
USP46-205ENST00000504078 GARNL3Q5VVW2 1013 aa3.34□□□□□ -1.87
USP46-205ENST00000504078 BICRALQ6AI39 1079 aa3.34□□□□□ -1.87
USP46-205ENST00000504078 PPP1R21Q6ZMI0 780 aa3.34□□□□□ -1.87
USP46-205ENST00000504078 GK5Q6ZS86 529 aa3.34□□□□□ -1.87
USP46-205ENST00000504078 ABHD13Q7L211 337 aa3.34□□□□□ -1.87
USP46-205ENST00000504078 PIWIL4Q7Z3Z4 852 aaKnown RBP3.34□□□□□ -1.87
USP46-205ENST00000504078 ASPGQ86U10 573 aa3.34□□□□□ -1.87
USP46-205ENST00000504078 SLC22A16Q86VW1 577 aa3.34□□□□□ -1.87
USP46-205ENST00000504078 SLC26A11Q86WA9 606 aa3.34□□□□□ -1.87
USP46-205ENST00000504078 SLC13A5Q86YT5 568 aaPredicted RBP3.34□□□□□ -1.87
USP46-205ENST00000504078 GCNT2Q8N0V5 402 aa3.34□□□□□ -1.87
USP46-205ENST00000504078 FAM109AQ8N4B1 249 aa3.34□□□□□ -1.87
USP46-205ENST00000504078 FAM71DQ8N9W8 422 aa3.34□□□□□ -1.87
USP46-205ENST00000504078 C9orf106Q8NAJ2 232 aa3.34□□□□□ -1.87
USP46-205ENST00000504078 APCDD1LQ8NCL9 501 aa3.34□□□□□ -1.87
USP46-205ENST00000504078 ZNF740Q8NDX6 193 aa3.34□□□□□ -1.87
USP46-205ENST00000504078 TMEM52Q8NDY8 209 aa3.34□□□□□ -1.87
USP46-205ENST00000504078 NFAM1Q8NET5 270 aaPredicted RBP3.34□□□□□ -1.87
USP46-205ENST00000504078 OR9A1PQ8NGU1 263 aa3.34□□□□□ -1.87
USP46-205ENST00000504078 PPP1R14CQ8TAE6 165 aa3.34□□□□□ -1.87
USP46-205ENST00000504078 ZNF480Q8WV37 535 aa3.34□□□□□ -1.87
USP46-205ENST00000504078 ASZ1Q8WWH4 475 aa3.34□□□□□ -1.87
USP46-205ENST00000504078 ATG4AQ8WYN0 398 aa3.34□□□□□ -1.87
USP46-205ENST00000504078 TMEM158Q8WZ71 300 aa3.34□□□□□ -1.87
USP46-205ENST00000504078 SMPDL3AQ92484 453 aa3.34□□□□□ -1.87
USP46-205ENST00000504078 ZUFSPQ96AP4 578 aa3.34□□□□□ -1.87
USP46-205ENST00000504078 TBC1D20Q96BZ9 403 aa3.34□□□□□ -1.87
USP46-205ENST00000504078 SCYL1Q96KG9 808 aa3.34□□□□□ -1.87
USP46-205ENST00000504078 DMRTB1Q96MA1 342 aa3.34□□□□□ -1.87
USP46-205ENST00000504078 TSNARE1Q96NA8 513 aa3.34□□□□□ -1.87
USP46-205ENST00000504078 FOPNLQ96NB1 174 aa3.34□□□□□ -1.87
USP46-205ENST00000504078 TRIB1Q96RU8 372 aa3.34□□□□□ -1.87
USP46-205ENST00000504078 RASL10BQ96S79 203 aa3.34□□□□□ -1.87
USP46-205ENST00000504078 CSF3RQ99062 836 aa3.34□□□□□ -1.87
USP46-205ENST00000504078 VAT1Q99536 393 aa3.34□□□□□ -1.87
USP46-205ENST00000504078 BDH2Q9BUT1 245 aa3.34□□□□□ -1.87
USP46-205ENST00000504078 C19orf24Q9BVV8 132 aa3.34□□□□□ -1.87
USP46-205ENST00000504078 TSSK1BQ9BXA7 367 aa3.34□□□□□ -1.87
USP46-205ENST00000504078 ZNF703Q9H7S9 590 aaPredicted RBP3.34□□□□□ -1.87
USP46-205ENST00000504078 ZDHHC11Q9H8X9 412 aa3.34□□□□□ -1.87
USP46-205ENST00000504078 LRRC40Q9H9A6 602 aa3.34□□□□□ -1.87
USP46-205ENST00000504078 EIF2B3Q9NR50 452 aaKnown RBP3.34□□□□□ -1.87
USP46-205ENST00000504078 CATSPERZQ9NTU4 200 aa3.34□□□□□ -1.87
USP46-205ENST00000504078 KLHL28Q9NXS3 571 aa3.34□□□□□ -1.87
USP46-205ENST00000504078 DDX56Q9NY93 547 aaKnown RBP3.34□□□□□ -1.87
USP46-205ENST00000504078 MTRF1LQ9UGC7 380 aaKnown RBP3.34□□□□□ -1.87
USP46-205ENST00000504078 TRHDEQ9UKU6 1024 aa3.34□□□□□ -1.87
USP46-205ENST00000504078 CNOT11Q9UKZ1 510 aaKnown RBP3.34□□□□□ -1.87
USP46-205ENST00000504078 ZNF148Q9UQR1 794 aa3.34□□□□□ -1.87
USP46-205ENST00000504078 AAR2Q9Y312 384 aaKnown RBP3.34□□□□□ -1.87
USP46-205ENST00000504078 SLC6A5Q9Y345 797 aa3.34□□□□□ -1.87
USP46-205ENST00000504078 KLK4Q9Y5K2 254 aa3.34□□□□□ -1.87
USP46-205ENST00000504078 ZNF407Q9C0G0 2248 aa3.34□□□□□ -1.88
USP46-205ENST00000504078 JMJD1CQ15652 2540 aa3.33□□□□□ -1.88
USP46-205ENST00000504078 ANK2Q01484 3957 aa3.33□□□□□ -1.88
USP46-205ENST00000504078 EML6Q6ZMW3 1958 aa3.33□□□□□ -1.88
USP46-205ENST00000504078 CR1P17927 2039 aa3.33□□□□□ -1.88
USP46-205ENST00000504078 ZC3H12DA2A288 527 aaKnown RBP3.33□□□□□ -1.88
USP46-205ENST00000504078 MROH6A6NGR9 719 aa3.33□□□□□ -1.88
USP46-205ENST00000504078 E7ENX8 843 aa3.33□□□□□ -1.88
USP46-205ENST00000504078 APOC4-APOC2K7ER74 178 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms