RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 MTF1Q14872 753 aa2.09□□□□□ -2.07
HMGB1P35-201ENST00000503360 TAB1Q15750 504 aa2.09□□□□□ -2.07
HMGB1P35-201ENST00000503360 SGCBQ16585 318 aa2.09□□□□□ -2.07
HMGB1P35-201ENST00000503360 LRRC37A5PQ49AS3 106 aa2.09□□□□□ -2.07
HMGB1P35-201ENST00000503360 WLSQ5T9L3 541 aa2.09□□□□□ -2.07
HMGB1P35-201ENST00000503360 RIPPLY2Q5TAB7 128 aa2.09□□□□□ -2.07
HMGB1P35-201ENST00000503360 ATP1A1-AS1Q5TC04 95 aa2.09□□□□□ -2.07
HMGB1P35-201ENST00000503360 CES4AQ5XG92 561 aa2.09□□□□□ -2.07
HMGB1P35-201ENST00000503360 SLC25A24Q6NUK1 477 aa2.09□□□□□ -2.07
HMGB1P35-201ENST00000503360 IRGCQ6NXR0 463 aa2.09□□□□□ -2.07
HMGB1P35-201ENST00000503360 NEK5Q6P3R8 708 aa2.09□□□□□ -2.07
HMGB1P35-201ENST00000503360 SIGLEC15Q6ZMC9 328 aa2.09□□□□□ -2.07
HMGB1P35-201ENST00000503360 MACC1Q6ZN28 852 aa2.09□□□□□ -2.07
HMGB1P35-201ENST00000503360 Q6ZRP5 223 aa2.09□□□□□ -2.07
HMGB1P35-201ENST00000503360 C15orf52Q6ZUT6 534 aaKnown RBP2.09□□□□□ -2.07
HMGB1P35-201ENST00000503360 CHMP1BQ7LBR1 199 aa2.09□□□□□ -2.07
HMGB1P35-201ENST00000503360 TRMT11Q7Z4G4 463 aaKnown RBP2.09□□□□□ -2.07
HMGB1P35-201ENST00000503360 ZNF410Q86VK4 478 aa2.09□□□□□ -2.07
HMGB1P35-201ENST00000503360 ZC3H3Q8IXZ2 948 aaKnown RBP2.09□□□□□ -2.07
HMGB1P35-201ENST00000503360 KLHDC8AQ8IYD2 350 aa2.09□□□□□ -2.07
HMGB1P35-201ENST00000503360 FBXW8Q8N3Y1 598 aa2.09□□□□□ -2.07
HMGB1P35-201ENST00000503360 OR5T2Q8NGG2 359 aa2.09□□□□□ -2.07
HMGB1P35-201ENST00000503360 OR4D10Q8NGI6 311 aa2.09□□□□□ -2.07
HMGB1P35-201ENST00000503360 OR52K2Q8NGK3 314 aa2.09□□□□□ -2.07
HMGB1P35-201ENST00000503360 SAP25Q8TEE9 199 aa2.09□□□□□ -2.07
HMGB1P35-201ENST00000503360 SLC5A11Q8WWX8 675 aa2.09□□□□□ -2.07
HMGB1P35-201ENST00000503360 RFT1Q96AA3 541 aa2.09□□□□□ -2.07
HMGB1P35-201ENST00000503360 OMA1Q96E52 524 aa2.09□□□□□ -2.07
HMGB1P35-201ENST00000503360 CNDP1Q96KN2 507 aa2.09□□□□□ -2.07
HMGB1P35-201ENST00000503360 FAM218AQ96MZ4 157 aa2.09□□□□□ -2.07
HMGB1P35-201ENST00000503360 PANX3Q96QZ0 392 aa2.09□□□□□ -2.07
HMGB1P35-201ENST00000503360 RASL10BQ96S79 203 aa2.09□□□□□ -2.07
HMGB1P35-201ENST00000503360 NAP1L3Q99457 506 aaPredicted RBP2.09□□□□□ -2.07
HMGB1P35-201ENST00000503360 IL12RB2Q99665 862 aa2.09□□□□□ -2.07
HMGB1P35-201ENST00000503360 PKP2Q99959 881 aa2.09□□□□□ -2.07
HMGB1P35-201ENST00000503360 RIBC2Q9H4K1 309 aa2.09□□□□□ -2.07
HMGB1P35-201ENST00000503360 VPS37BQ9H9H4 285 aa2.09□□□□□ -2.07
HMGB1P35-201ENST00000503360 SPHK2Q9NRA0 654 aa2.09□□□□□ -2.07
HMGB1P35-201ENST00000503360 MRPL17Q9NRX2 175 aaKnown RBP2.09□□□□□ -2.07
HMGB1P35-201ENST00000503360 GPR173Q9NS66 373 aa2.09□□□□□ -2.07
HMGB1P35-201ENST00000503360 ANKMY1Q9P2S6 941 aa2.09□□□□□ -2.07
HMGB1P35-201ENST00000503360 MAD2L2Q9UI95 211 aa2.09□□□□□ -2.07
HMGB1P35-201ENST00000503360 NAP1L2Q9ULW6 460 aaPredicted RBP2.09□□□□□ -2.07
HMGB1P35-201ENST00000503360 SATB2Q9UPW6 733 aa2.09□□□□□ -2.07
HMGB1P35-201ENST00000503360 EXOGQ9Y2C4 368 aaKnown RBP2.09□□□□□ -2.07
HMGB1P35-201ENST00000503360 TMED7Q9Y3B3 224 aa2.09□□□□□ -2.07
HMGB1P35-201ENST00000503360 STRAPQ9Y3F4 350 aaKnown RBP2.09□□□□□ -2.07
HMGB1P35-201ENST00000503360 TEX264Q9Y6I9 313 aa2.09□□□□□ -2.07
HMGB1P35-201ENST00000503360 CSNK1G3Q9Y6M4 447 aa2.09□□□□□ -2.07
HMGB1P35-201ENST00000503360 U3KQV3 271 aa2.09□□□□□ -2.07
HMGB1P35-201ENST00000503360 ARID2Q68CP9 1835 aa2.08□□□□□ -2.08
HMGB1P35-201ENST00000503360 SPATA31D1Q6ZQQ2 1576 aa2.08□□□□□ -2.08
HMGB1P35-201ENST00000503360 A0A087X0K7 114 aa2.08□□□□□ -2.08
HMGB1P35-201ENST00000503360 IGKV6D-41A0A0C4DH26 115 aa2.08□□□□□ -2.08
HMGB1P35-201ENST00000503360 MAGEB16A2A368 324 aa2.08□□□□□ -2.08
HMGB1P35-201ENST00000503360 CCDC162PA2VCL2 907 aa2.08□□□□□ -2.08
HMGB1P35-201ENST00000503360 KPNA7A9QM74 516 aa2.08□□□□□ -2.08
HMGB1P35-201ENST00000503360 ZNF732B4DXR9 585 aa2.08□□□□□ -2.08
HMGB1P35-201ENST00000503360 M0R296 226 aa2.08□□□□□ -2.08
HMGB1P35-201ENST00000503360 AP3B1O00203 1094 aa2.08□□□□□ -2.08
HMGB1P35-201ENST00000503360 MAGEB2O15479 319 aa2.08□□□□□ -2.08
HMGB1P35-201ENST00000503360 SSX5O60225 188 aa2.08□□□□□ -2.08
HMGB1P35-201ENST00000503360 HSF2BPO75031 334 aa2.08□□□□□ -2.08
HMGB1P35-201ENST00000503360 PRDM1O75626 825 aa2.08□□□□□ -2.08
HMGB1P35-201ENST00000503360 GRAP2O75791 330 aa2.08□□□□□ -2.08
HMGB1P35-201ENST00000503360 AKR7A3O95154 331 aa2.08□□□□□ -2.08
HMGB1P35-201ENST00000503360 TGFAP01135 160 aa2.08□□□□□ -2.08
HMGB1P35-201ENST00000503360 SBK2P0C263 348 aa2.08□□□□□ -2.08
HMGB1P35-201ENST00000503360 TSPY4P0CV99 314 aa2.08□□□□□ -2.08
HMGB1P35-201ENST00000503360 TSPY10P0CW01 314 aa2.08□□□□□ -2.08
HMGB1P35-201ENST00000503360 KRT3P12035 628 aa2.08□□□□□ -2.08
HMGB1P35-201ENST00000503360 AREGP15514 252 aa2.08□□□□□ -2.08
HMGB1P35-201ENST00000503360 VCLP18206 1134 aa2.08□□□□□ -2.08
HMGB1P35-201ENST00000503360 PRKACGP22612 351 aa2.08□□□□□ -2.08
HMGB1P35-201ENST00000503360 CTNNA2P26232 953 aa2.08□□□□□ -2.08
HMGB1P35-201ENST00000503360 CASQ1P31415 396 aa2.08□□□□□ -2.08
HMGB1P35-201ENST00000503360 CHRNA3P32297 505 aa2.08□□□□□ -2.08
HMGB1P35-201ENST00000503360 MDH1P40925 334 aaKnown RBP2.08□□□□□ -2.08
HMGB1P35-201ENST00000503360 MAGEA4P43358 317 aa2.08□□□□□ -2.08
HMGB1P35-201ENST00000503360 GBX2P52951 348 aaPredicted RBP2.08□□□□□ -2.08
HMGB1P35-201ENST00000503360 ACTR1AP61163 376 aa2.08□□□□□ -2.08
HMGB1P35-201ENST00000503360 SLC34A1Q06495 639 aa2.08□□□□□ -2.08
HMGB1P35-201ENST00000503360 COX10Q12887 443 aa2.08□□□□□ -2.08
HMGB1P35-201ENST00000503360 SCGB2A2Q13296 93 aa2.08□□□□□ -2.08
HMGB1P35-201ENST00000503360 TMED1Q13445 227 aa2.08□□□□□ -2.08
HMGB1P35-201ENST00000503360 DRP2Q13474 957 aa2.08□□□□□ -2.08
HMGB1P35-201ENST00000503360 DPYSQ14117 519 aa2.08□□□□□ -2.08
HMGB1P35-201ENST00000503360 MAPK11Q15759 364 aa2.08□□□□□ -2.08
HMGB1P35-201ENST00000503360 ACKR1Q16570 336 aa2.08□□□□□ -2.08
HMGB1P35-201ENST00000503360 MAJINQ3KP22 176 aa2.08□□□□□ -2.08
HMGB1P35-201ENST00000503360 FAM106AQ4KMX7 169 aa2.08□□□□□ -2.08
HMGB1P35-201ENST00000503360 BOLA3Q53S33 107 aa2.08□□□□□ -2.08
HMGB1P35-201ENST00000503360 CCDC183Q5T5S1 534 aa2.08□□□□□ -2.08
HMGB1P35-201ENST00000503360 LCE1CQ5T751 118 aa2.08□□□□□ -2.08
HMGB1P35-201ENST00000503360 LCE1BQ5T7P3 118 aa2.08□□□□□ -2.08
HMGB1P35-201ENST00000503360 AGAP6Q5VW22 663 aa2.08□□□□□ -2.08
HMGB1P35-201ENST00000503360 SLC27A4Q6P1M0 643 aa2.08□□□□□ -2.08
HMGB1P35-201ENST00000503360 ZCCHC12Q6PEW1 402 aa2.08□□□□□ -2.08
HMGB1P35-201ENST00000503360 AFTPHQ6ULP2 937 aa2.08□□□□□ -2.08
HMGB1P35-201ENST00000503360 C17orf107Q6ZR85 190 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms