RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 TBCDQ9BTW9 1192 aa5.66□□□□□ -1.5
LSM3P4-201ENST00000502948 RBCK1Q9BYM8 510 aa5.66□□□□□ -1.5
LSM3P4-201ENST00000502948 RHOJQ9H4E5 214 aa5.66□□□□□ -1.5
LSM3P4-201ENST00000502948 PRDM7Q9NQW5 492 aa5.66□□□□□ -1.5
LSM3P4-201ENST00000502948 SACM1LQ9NTJ5 587 aa5.66□□□□□ -1.5
LSM3P4-201ENST00000502948 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.66□□□□□ -1.5
LSM3P4-201ENST00000502948 PSD3Q9NYI0 1048 aa5.66□□□□□ -1.5
LSM3P4-201ENST00000502948 CNIH4Q9P003 139 aa5.66□□□□□ -1.5
LSM3P4-201ENST00000502948 KCMF1Q9P0J7 381 aa5.66□□□□□ -1.5
LSM3P4-201ENST00000502948 FBXW2Q9UKT8 454 aa5.66□□□□□ -1.5
LSM3P4-201ENST00000502948 ERVK-11Q9UQG0 969 aa5.66□□□□□ -1.5
LSM3P4-201ENST00000502948 PRRC2AP48634 2157 aaKnown RBP5.66□□□□□ -1.5
LSM3P4-201ENST00000502948 FAM95CA0A1B0GW59 222 aa5.65□□□□□ -1.5
LSM3P4-201ENST00000502948 SYT5O00445 386 aa5.65□□□□□ -1.5
LSM3P4-201ENST00000502948 PRKNO60260 465 aaPredicted RBP5.65□□□□□ -1.5
LSM3P4-201ENST00000502948 CTAG2O75638 210 aa5.65□□□□□ -1.5
LSM3P4-201ENST00000502948 KRT38O76015 456 aa5.65□□□□□ -1.5
LSM3P4-201ENST00000502948 WDR47O94967 919 aa5.65□□□□□ -1.5
LSM3P4-201ENST00000502948 OR6B1O95007 311 aa5.65□□□□□ -1.5
LSM3P4-201ENST00000502948 B3GALT4O96024 378 aa5.65□□□□□ -1.5
LSM3P4-201ENST00000502948 F7P08709 466 aaPredicted RBP5.65□□□□□ -1.5
LSM3P4-201ENST00000502948 GLI4P10075 376 aa5.65□□□□□ -1.5
LSM3P4-201ENST00000502948 TCP1P17987 556 aaKnown RBP5.65□□□□□ -1.5
LSM3P4-201ENST00000502948 DNAJA1P31689 397 aaKnown RBP5.65□□□□□ -1.5
LSM3P4-201ENST00000502948 TIMP3P35625 211 aa5.65□□□□□ -1.5
LSM3P4-201ENST00000502948 SOX3P41225 446 aa5.65□□□□□ -1.5
LSM3P4-201ENST00000502948 ELK3P41970 407 aa5.65□□□□□ -1.5
LSM3P4-201ENST00000502948 PCYT1AP49585 367 aa5.65□□□□□ -1.5
LSM3P4-201ENST00000502948 HK2P52789 917 aa5.65□□□□□ -1.5
LSM3P4-201ENST00000502948 NUP107P57740 925 aa5.65□□□□□ -1.5
LSM3P4-201ENST00000502948 ATP6V0D1P61421 351 aa5.65□□□□□ -1.5
LSM3P4-201ENST00000502948 BTN3A2P78410 334 aa5.65□□□□□ -1.5
LSM3P4-201ENST00000502948 POU4F1Q01851 419 aa5.65□□□□□ -1.5
LSM3P4-201ENST00000502948 MGAT5Q09328 741 aa5.65□□□□□ -1.5
LSM3P4-201ENST00000502948 PMPCAQ10713 525 aa5.65□□□□□ -1.5
LSM3P4-201ENST00000502948 STX4Q12846 297 aa5.65□□□□□ -1.5
LSM3P4-201ENST00000502948 SLBPQ14493 270 aaKnown RBP eCLIP5.65□□□□□ -1.5
LSM3P4-201ENST00000502948 SLC10A1Q14973 349 aa5.65□□□□□ -1.5
LSM3P4-201ENST00000502948 DAZAP2Q15038 168 aaPredicted RBP5.65□□□□□ -1.5
LSM3P4-201ENST00000502948 SF3B4Q15427 424 aaKnown RBP eCLIP5.65□□□□□ -1.5
LSM3P4-201ENST00000502948 SPRED3Q2MJR0 410 aa5.65□□□□□ -1.5
LSM3P4-201ENST00000502948 ZNF791Q3KP31 576 aaPredicted RBP5.65□□□□□ -1.5
LSM3P4-201ENST00000502948 XKR6Q5GH73 641 aa5.65□□□□□ -1.5
LSM3P4-201ENST00000502948 PIGGQ5H8A4 983 aa5.65□□□□□ -1.5
LSM3P4-201ENST00000502948 TOR1AIP1Q5JTV8 583 aa5.65□□□□□ -1.5
LSM3P4-201ENST00000502948 TBCELQ5QJ74 424 aa5.65□□□□□ -1.5
LSM3P4-201ENST00000502948 RTL6Q6ICC9 239 aa5.65□□□□□ -1.5
LSM3P4-201ENST00000502948 SULT1C3Q6IMI6 304 aa5.65□□□□□ -1.5
LSM3P4-201ENST00000502948 METTL2BQ6P1Q9 378 aaKnown RBP5.65□□□□□ -1.5
LSM3P4-201ENST00000502948 TMEM81Q6P7N7 255 aa5.65□□□□□ -1.5
LSM3P4-201ENST00000502948 TRMT10BQ6PF06 316 aaKnown RBP5.65□□□□□ -1.5
LSM3P4-201ENST00000502948 CEP128Q6ZU80 1094 aa5.65□□□□□ -1.5
LSM3P4-201ENST00000502948 NCCRP1Q6ZVX7 275 aaPredicted RBP5.65□□□□□ -1.5
LSM3P4-201ENST00000502948 VN1R5Q7Z5H4 357 aa5.65□□□□□ -1.5
LSM3P4-201ENST00000502948 CCDC91Q7Z6B0 441 aa5.65□□□□□ -1.5
LSM3P4-201ENST00000502948 IGDCC3Q8IVU1 814 aa5.65□□□□□ -1.5
LSM3P4-201ENST00000502948 LAS2Q8IYD9 372 aa5.65□□□□□ -1.5
LSM3P4-201ENST00000502948 LRRC25Q8N386 305 aaPredicted RBP5.65□□□□□ -1.5
LSM3P4-201ENST00000502948 FBXW8Q8N3Y1 598 aa5.65□□□□□ -1.5
LSM3P4-201ENST00000502948 ZCCHC7Q8N3Z6 543 aaKnown RBP5.65□□□□□ -1.5
LSM3P4-201ENST00000502948 TMEM251Q8N6I4 163 aa5.65□□□□□ -1.5
LSM3P4-201ENST00000502948 BBOF1Q8ND07 529 aa5.65□□□□□ -1.5
LSM3P4-201ENST00000502948 ZNF721Q8TF20 911 aa5.65□□□□□ -1.5
LSM3P4-201ENST00000502948 NTNG2Q96CW9 530 aa5.65□□□□□ -1.5
LSM3P4-201ENST00000502948 MBD6Q96DN6 1003 aa5.65□□□□□ -1.5
LSM3P4-201ENST00000502948 LRRC46Q96FV0 321 aa5.65□□□□□ -1.5
LSM3P4-201ENST00000502948 TSPAN17Q96FV3 270 aa5.65□□□□□ -1.5
LSM3P4-201ENST00000502948 POM121Q96HA1 1249 aa5.65□□□□□ -1.5
LSM3P4-201ENST00000502948 MS4A14Q96JA4 679 aa5.65□□□□□ -1.5
LSM3P4-201ENST00000502948 SCYL1Q96KG9 808 aa5.65□□□□□ -1.5
LSM3P4-201ENST00000502948 UBXN10Q96LJ8 280 aa5.65□□□□□ -1.5
LSM3P4-201ENST00000502948 TSNARE1Q96NA8 513 aa5.65□□□□□ -1.5
LSM3P4-201ENST00000502948 ALPK1Q96QP1 1244 aa5.65□□□□□ -1.5
LSM3P4-201ENST00000502948 SMC6Q96SB8 1091 aa5.65□□□□□ -1.5
LSM3P4-201ENST00000502948 SECISBP2Q96T21 854 aaKnown RBP5.65□□□□□ -1.5
LSM3P4-201ENST00000502948 EGFL8Q99944 293 aa5.65□□□□□ -1.5
LSM3P4-201ENST00000502948 PELOQ9BRX2 385 aaKnown RBP5.65□□□□□ -1.5
LSM3P4-201ENST00000502948 MS4A8Q9BY19 250 aa5.65□□□□□ -1.5
LSM3P4-201ENST00000502948 ALOXE3Q9BYJ1 711 aa5.65□□□□□ -1.5
LSM3P4-201ENST00000502948 PHACTR1Q9C0D0 580 aa5.65□□□□□ -1.5
LSM3P4-201ENST00000502948 PPANQ9NQ55 473 aaKnown RBP5.65□□□□□ -1.5
LSM3P4-201ENST00000502948 PNO1Q9NRX1 252 aaKnown RBP5.65□□□□□ -1.5
LSM3P4-201ENST00000502948 DNAJC11Q9NVH1 559 aa5.65□□□□□ -1.5
LSM3P4-201ENST00000502948 CTNNAL1Q9UBT7 734 aa5.65□□□□□ -1.5
LSM3P4-201ENST00000502948 COPS7AQ9UBW8 275 aa5.65□□□□□ -1.5
LSM3P4-201ENST00000502948 ZNF629Q9UEG4 869 aaPredicted RBP5.65□□□□□ -1.5
LSM3P4-201ENST00000502948 ASIC3Q9UHC3 531 aa5.65□□□□□ -1.5
LSM3P4-201ENST00000502948 ITGB1BP2Q9UKP3 347 aa5.65□□□□□ -1.5
LSM3P4-201ENST00000502948 IKZF3Q9UKT9 509 aa5.65□□□□□ -1.5
LSM3P4-201ENST00000502948 ZNF490Q9ULM2 529 aaPredicted RBP5.65□□□□□ -1.5
LSM3P4-201ENST00000502948 SNX12Q9UMY4 172 aa5.65□□□□□ -1.5
LSM3P4-201ENST00000502948 L3MBTL1Q9Y468 752 aa5.65□□□□□ -1.5
LSM3P4-201ENST00000502948 ATG4BQ9Y4P1 393 aa5.65□□□□□ -1.5
LSM3P4-201ENST00000502948 FAM215AQ9Y5M1 114 aa5.65□□□□□ -1.5
LSM3P4-201ENST00000502948 SPACA6W5XKT8 324 aa5.65□□□□□ -1.5
LSM3P4-201ENST00000502948 ZNF469Q96JG9 3925 aaPredicted RBP5.65□□□□□ -1.51
LSM3P4-201ENST00000502948 EXPH5Q8NEV8 1989 aa5.65□□□□□ -1.51
LSM3P4-201ENST00000502948 NCKAP5O14513 1909 aa5.64□□□□□ -1.51
LSM3P4-201ENST00000502948 A0A0G2JNJ9 132 aa5.64□□□□□ -1.51
LSM3P4-201ENST00000502948 PINLYPA6NC86 204 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms