RNA–Protein interactions for RNA: ENST00000502557.5

CCHCR1-216, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 662 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-216ENST00000502557 NEFHP12036 1026 aa16.75■□□□□ 0.27
CCHCR1-216ENST00000502557 GRK2P25098 689 aa16.75■□□□□ 0.27
CCHCR1-216ENST00000502557 POLE2P56282 527 aa16.75■□□□□ 0.27
CCHCR1-216ENST00000502557 HSD17B7P56937 341 aa16.75■□□□□ 0.27
CCHCR1-216ENST00000502557 ABCE1P61221 599 aaKnown RBP16.75■□□□□ 0.27
CCHCR1-216ENST00000502557 PCOLCEQ15113 449 aa16.75■□□□□ 0.27
CCHCR1-216ENST00000502557 UGT3A2Q3SY77 523 aa16.75■□□□□ 0.27
CCHCR1-216ENST00000502557 SH2D4BQ5SQS7 431 aa16.75■□□□□ 0.27
CCHCR1-216ENST00000502557 RNF165Q6ZSG1 346 aa16.75■□□□□ 0.27
CCHCR1-216ENST00000502557 NDUFAF7Q7L592 441 aa16.75■□□□□ 0.27
CCHCR1-216ENST00000502557 CPEB2Q7Z5Q1 589 aaKnown RBP16.75■□□□□ 0.27
CCHCR1-216ENST00000502557 C20orf27Q9GZN8 174 aa16.75■□□□□ 0.27
CCHCR1-216ENST00000502557 ZNF700Q9H0M5 742 aa16.75■□□□□ 0.27
CCHCR1-216ENST00000502557 TUBB1Q9H4B7 451 aa16.75■□□□□ 0.27
CCHCR1-216ENST00000502557 MS4A12Q9NXJ0 267 aa16.75■□□□□ 0.27
CCHCR1-216ENST00000502557 C19orf25Q9UFG5 118 aaPredicted RBP16.75■□□□□ 0.27
CCHCR1-216ENST00000502557 ZDHHC2Q9UIJ5 367 aa16.75■□□□□ 0.27
CCHCR1-216ENST00000502557 PHF11Q9UIL8 331 aa16.75■□□□□ 0.27
CCHCR1-216ENST00000502557 MRPS33Q9Y291 106 aaKnown RBP16.75■□□□□ 0.27
CCHCR1-216ENST00000502557 CLDN16Q9Y5I7 305 aa16.75■□□□□ 0.27
CCHCR1-216ENST00000502557 DNAJC15Q9Y5T4 150 aa16.75■□□□□ 0.27
CCHCR1-216ENST00000502557 PTGDR2Q9Y5Y4 395 aa16.75■□□□□ 0.27
CCHCR1-216ENST00000502557 SPACA6W5XKT8 324 aa16.75■□□□□ 0.27
CCHCR1-216ENST00000502557 ZZEF1O43149 2961 aa16.75■□□□□ 0.27
CCHCR1-216ENST00000502557 IGHV3-20A0A0C4DH32 117 aa16.74■□□□□ 0.27
CCHCR1-216ENST00000502557 A0A1W2PR48 441 aa16.74■□□□□ 0.27
CCHCR1-216ENST00000502557 TGFBR3LH3BV60 316 aa16.74■□□□□ 0.27
CCHCR1-216ENST00000502557 PROM1O43490 865 aa16.74■□□□□ 0.27
CCHCR1-216ENST00000502557 FAM87AP0C7U9 286 aa16.74■□□□□ 0.27
CCHCR1-216ENST00000502557 CCL11P51671 97 aa16.74■□□□□ 0.27
CCHCR1-216ENST00000502557 TNFRSF17Q02223 184 aa16.74■□□□□ 0.27
CCHCR1-216ENST00000502557 STX3Q13277 289 aa16.74■□□□□ 0.27
CCHCR1-216ENST00000502557 CCNYL2Q5T2Q4 361 aa16.74■□□□□ 0.27
CCHCR1-216ENST00000502557 C18orf63Q68DL7 685 aa16.74■□□□□ 0.27
CCHCR1-216ENST00000502557 CLNKQ7Z7G1 428 aa16.74■□□□□ 0.27
CCHCR1-216ENST00000502557 EXD3Q8N9H8 876 aa16.74■□□□□ 0.27
CCHCR1-216ENST00000502557 AGR3Q8TD06 166 aa16.74■□□□□ 0.27
CCHCR1-216ENST00000502557 APIPQ96GX9 242 aa16.74■□□□□ 0.27
CCHCR1-216ENST00000502557 UBL7Q96S82 380 aaPredicted RBP16.74■□□□□ 0.27
CCHCR1-216ENST00000502557 WDR77Q9BQA1 342 aaPredicted RBP16.74■□□□□ 0.27
CCHCR1-216ENST00000502557 ARHGAP9Q9BRR9 750 aa16.74■□□□□ 0.27
CCHCR1-216ENST00000502557 ZNF160Q9HCG1 818 aa16.74■□□□□ 0.27
CCHCR1-216ENST00000502557 CCL27Q9Y4X3 112 aa16.74■□□□□ 0.27
CCHCR1-216ENST00000502557 NSG1A0A0A6YYJ2 146 aa16.73■□□□□ 0.27
CCHCR1-216ENST00000502557 TCRBV16S1A1N1A0A5B0 115 aa16.73■□□□□ 0.27
CCHCR1-216ENST00000502557 ARHGAP10A1A4S6 786 aa16.73■□□□□ 0.27
CCHCR1-216ENST00000502557 BLACEA4D250 179 aa16.73■□□□□ 0.27
CCHCR1-216ENST00000502557 SLC28A1O00337 649 aa16.73■□□□□ 0.27
CCHCR1-216ENST00000502557 CTNSO60931 367 aa16.73■□□□□ 0.27
CCHCR1-216ENST00000502557 PRKRAO75569 313 aaKnown RBP16.73■□□□□ 0.27
CCHCR1-216ENST00000502557 CHEK2O96017 543 aa16.73■□□□□ 0.27
CCHCR1-216ENST00000502557 SLC1A6P48664 564 aa16.73■□□□□ 0.27
CCHCR1-216ENST00000502557 MAPK12P53778 367 aa16.73■□□□□ 0.27
CCHCR1-216ENST00000502557 OR4D2P58180 307 aa16.73■□□□□ 0.27
CCHCR1-216ENST00000502557 RAE1P78406 368 aaKnown RBP16.73■□□□□ 0.27
CCHCR1-216ENST00000502557 BTKQ06187 659 aa16.73■□□□□ 0.27
CCHCR1-216ENST00000502557 ACSM2AQ08AH3 577 aa16.73■□□□□ 0.27
CCHCR1-216ENST00000502557 Q0VFX4 171 aa16.73■□□□□ 0.27
CCHCR1-216ENST00000502557 BST1Q10588 318 aa16.73■□□□□ 0.27
CCHCR1-216ENST00000502557 SLC13A2Q13183 592 aa16.73■□□□□ 0.27
CCHCR1-216ENST00000502557 IMPG1Q17R60 797 aa16.73■□□□□ 0.27
CCHCR1-216ENST00000502557 SPIN4Q56A73 249 aa16.73■□□□□ 0.27
CCHCR1-216ENST00000502557 SFT2D3Q587I9 215 aa16.73■□□□□ 0.27
CCHCR1-216ENST00000502557 ACSM2BQ68CK6 577 aa16.73■□□□□ 0.27
CCHCR1-216ENST00000502557 AMER2Q8N7J2 671 aa16.73■□□□□ 0.27
CCHCR1-216ENST00000502557 CLEC1AQ8NC01 280 aa16.73■□□□□ 0.27
CCHCR1-216ENST00000502557 TWIST2Q8WVJ9 160 aa16.73■□□□□ 0.27
CCHCR1-216ENST00000502557 C11orf24Q96F05 449 aaPredicted RBP16.73■□□□□ 0.27
CCHCR1-216ENST00000502557 WBP1Q96G27 269 aa16.73■□□□□ 0.27
CCHCR1-216ENST00000502557 SORT1Q99523 831 aa16.73■□□□□ 0.27
CCHCR1-216ENST00000502557 ACBD3Q9H3P7 528 aa16.73■□□□□ 0.27
CCHCR1-216ENST00000502557 ATP13A2Q9NQ11 1180 aa16.73■□□□□ 0.27
CCHCR1-216ENST00000502557 RIC8BQ9NVN3 520 aa16.73■□□□□ 0.27
CCHCR1-216ENST00000502557 PIP5K1BO14986 540 aa16.72■□□□□ 0.27
CCHCR1-216ENST00000502557 RSL1D1O76021 490 aaKnown RBP16.72■□□□□ 0.27
CCHCR1-216ENST00000502557 SEC24DO94855 1032 aaPredicted RBP16.72■□□□□ 0.27
CCHCR1-216ENST00000502557 AIFM1O95831 613 aa16.72■□□□□ 0.27
CCHCR1-216ENST00000502557 LINC00032P0C843 101 aa16.72■□□□□ 0.27
CCHCR1-216ENST00000502557 NR2F6P10588 404 aa16.72■□□□□ 0.27
CCHCR1-216ENST00000502557 TLX1P31314 330 aaPredicted RBP16.72■□□□□ 0.27
CCHCR1-216ENST00000502557 BUD31P41223 144 aaPredicted RBP16.72■□□□□ 0.27
CCHCR1-216ENST00000502557 AIMP2Q13155 320 aaKnown RBP16.72■□□□□ 0.27
CCHCR1-216ENST00000502557 KCNAB2Q13303 367 aa16.72■□□□□ 0.27
CCHCR1-216ENST00000502557 SPDYAQ5MJ70 313 aa16.72■□□□□ 0.27
CCHCR1-216ENST00000502557 Q6ZSR9 355 aa16.72■□□□□ 0.27
CCHCR1-216ENST00000502557 HOMEZQ8IX15 550 aa16.72■□□□□ 0.27
CCHCR1-216ENST00000502557 PARP9Q8IXQ6 854 aa16.72■□□□□ 0.27
CCHCR1-216ENST00000502557 ZNF781Q8N8C0 355 aa16.72■□□□□ 0.27
CCHCR1-216ENST00000502557 OR2T11Q8NH01 316 aa16.72■□□□□ 0.27
CCHCR1-216ENST00000502557 UCN3Q969E3 161 aa16.72■□□□□ 0.27
CCHCR1-216ENST00000502557 ANKRD9Q96BM1 317 aaPredicted RBP16.72■□□□□ 0.27
CCHCR1-216ENST00000502557 IMMP1LQ96LU5 166 aa16.72■□□□□ 0.27
CCHCR1-216ENST00000502557 TUBB6Q9BUF5 446 aa16.72■□□□□ 0.27
CCHCR1-216ENST00000502557 RPF2Q9H7B2 306 aaKnown RBP16.72■□□□□ 0.27
CCHCR1-216ENST00000502557 SIRT5Q9NXA8 310 aa16.72■□□□□ 0.27
CCHCR1-216ENST00000502557 TEX10Q9NXF1 929 aaPredicted RBP16.72■□□□□ 0.27
CCHCR1-216ENST00000502557 MCM8Q9UJA3 840 aa16.72■□□□□ 0.27
CCHCR1-216ENST00000502557 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.72■□□□□ 0.27
CCHCR1-216ENST00000502557 RAP2CQ9Y3L5 183 aa16.72■□□□□ 0.27
CCHCR1-216ENST00000502557 LAMA5O15230 3695 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms