RNA–Protein interactions for RNA: ENST00000502316.5

RNF4-202, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-202ENST00000502316 SCUBE1Q8IWY4 988 aa13.34□□□□□ -0.27
RNF4-202ENST00000502316 TMEM52Q8NDY8 209 aa13.34□□□□□ -0.27
RNF4-202ENST00000502316 OR2T11Q8NH01 316 aa13.34□□□□□ -0.27
RNF4-202ENST00000502316 ZNF75CPQ92670 426 aaPredicted RBP13.34□□□□□ -0.27
RNF4-202ENST00000502316 APIPQ96GX9 242 aa13.34□□□□□ -0.27
RNF4-202ENST00000502316 CSF3RQ99062 836 aa13.34□□□□□ -0.27
RNF4-202ENST00000502316 INTS9Q9NV88 658 aaKnown RBP13.34□□□□□ -0.27
RNF4-202ENST00000502316 MCM8Q9UJA3 840 aa13.34□□□□□ -0.27
RNF4-202ENST00000502316 POLHQ9Y253 713 aa13.34□□□□□ -0.27
RNF4-202ENST00000502316 MRPS33Q9Y291 106 aaKnown RBP13.34□□□□□ -0.27
RNF4-202ENST00000502316 FIS1Q9Y3D6 152 aa13.34□□□□□ -0.27
RNF4-202ENST00000502316 ATG4BQ9Y4P1 393 aa13.34□□□□□ -0.27
RNF4-202ENST00000502316 MMACHCQ9Y4U1 282 aa13.34□□□□□ -0.27
RNF4-202ENST00000502316 CLDN16Q9Y5I7 305 aa13.34□□□□□ -0.27
RNF4-202ENST00000502316 PTGDR2Q9Y5Y4 395 aa13.34□□□□□ -0.27
RNF4-202ENST00000502316 SPACA6W5XKT8 324 aa13.34□□□□□ -0.27
RNF4-202ENST00000502316 OR2W5A6NFC9 320 aa13.33□□□□□ -0.28
RNF4-202ENST00000502316 PIP5K1BO14986 540 aa13.33□□□□□ -0.28
RNF4-202ENST00000502316 PROM1O43490 865 aa13.33□□□□□ -0.28
RNF4-202ENST00000502316 RGS14O43566 566 aa13.33□□□□□ -0.28
RNF4-202ENST00000502316 PRMT3O60678 531 aa13.33□□□□□ -0.28
RNF4-202ENST00000502316 B4GALT2O60909 372 aa13.33□□□□□ -0.28
RNF4-202ENST00000502316 ITGB2P05107 769 aa13.33□□□□□ -0.28
RNF4-202ENST00000502316 KLK1P06870 262 aa13.33□□□□□ -0.28
RNF4-202ENST00000502316 C8orf89P0DMQ9 161 aa13.33□□□□□ -0.28
RNF4-202ENST00000502316 RPL14P50914 215 aaKnown RBP13.33□□□□□ -0.28
RNF4-202ENST00000502316 TRA2BP62995 288 aaKnown RBP13.33□□□□□ -0.28
RNF4-202ENST00000502316 RAE1P78406 368 aaKnown RBP13.33□□□□□ -0.28
RNF4-202ENST00000502316 TNFRSF17Q02223 184 aa13.33□□□□□ -0.28
RNF4-202ENST00000502316 ACSM2AQ08AH3 577 aa13.33□□□□□ -0.28
RNF4-202ENST00000502316 ATP1A4Q13733 1029 aa13.33□□□□□ -0.28
RNF4-202ENST00000502316 KIAA0040Q15053 153 aa13.33□□□□□ -0.28
RNF4-202ENST00000502316 CCNYL2Q5T2Q4 361 aa13.33□□□□□ -0.28
RNF4-202ENST00000502316 ACSM2BQ68CK6 577 aa13.33□□□□□ -0.28
RNF4-202ENST00000502316 C19orf48Q6RUI8 117 aa13.33□□□□□ -0.28
RNF4-202ENST00000502316 KIRREL2Q6UWL6 708 aa13.33□□□□□ -0.28
RNF4-202ENST00000502316 GPR155Q7Z3F1 870 aa13.33□□□□□ -0.28
RNF4-202ENST00000502316 FAM47BQ8NA70 645 aa13.33□□□□□ -0.28
RNF4-202ENST00000502316 OR11G2Q8NGC1 345 aa13.33□□□□□ -0.28
RNF4-202ENST00000502316 FAM76AQ8TAV0 307 aa13.33□□□□□ -0.28
RNF4-202ENST00000502316 FCRL1Q96LA6 429 aa13.33□□□□□ -0.28
RNF4-202ENST00000502316 MESP1Q9BRJ9 268 aa13.33□□□□□ -0.28
RNF4-202ENST00000502316 PRDM9Q9NQV7 894 aa13.33□□□□□ -0.28
RNF4-202ENST00000502316 P4HTMQ9NXG6 502 aa13.33□□□□□ -0.28
RNF4-202ENST00000502316 FBXW2Q9UKT8 454 aa13.33□□□□□ -0.28
RNF4-202ENST00000502316 A0A1W2PR48 441 aa13.32□□□□□ -0.28
RNF4-202ENST00000502316 TCRBV16S1A1N1A0A5B0 115 aa13.32□□□□□ -0.28
RNF4-202ENST00000502316 ARHGAP10A1A4S6 786 aa13.32□□□□□ -0.28
RNF4-202ENST00000502316 SYNDIG1LA6NDD5 238 aa13.32□□□□□ -0.28
RNF4-202ENST00000502316 CLDN4O14493 209 aa13.32□□□□□ -0.28
RNF4-202ENST00000502316 LSM1O15116 133 aaKnown RBP13.32□□□□□ -0.28
RNF4-202ENST00000502316 LINC00032P0C843 101 aa13.32□□□□□ -0.28
RNF4-202ENST00000502316 ACPPP15309 386 aa13.32□□□□□ -0.28
RNF4-202ENST00000502316 MAOAP21397 527 aa13.32□□□□□ -0.28
RNF4-202ENST00000502316 CPN2P22792 545 aa13.32□□□□□ -0.28
RNF4-202ENST00000502316 TIA1P31483 386 aaKnown RBP eCLIP13.32□□□□□ -0.285e-7■■■■□ 23.6
RNF4-202ENST00000502316 BUD31P41223 144 aaPredicted RBP13.32□□□□□ -0.28
RNF4-202ENST00000502316 MAPK12P53778 367 aa13.32□□□□□ -0.28
RNF4-202ENST00000502316 BTG2P78543 158 aa13.32□□□□□ -0.28
RNF4-202ENST00000502316 NSDHLQ15738 373 aa13.32□□□□□ -0.28
RNF4-202ENST00000502316 SPDYAQ5MJ70 313 aa13.32□□□□□ -0.28
RNF4-202ENST00000502316 MFSD4BQ5TF39 518 aa13.32□□□□□ -0.28
RNF4-202ENST00000502316 LANCL3Q6ZV70 420 aa13.32□□□□□ -0.28
RNF4-202ENST00000502316 APLFQ8IW19 511 aaPredicted RBP13.32□□□□□ -0.28
RNF4-202ENST00000502316 DDIASQ8IXT1 998 aa13.32□□□□□ -0.28
RNF4-202ENST00000502316 EFCAB3Q8N7B9 438 aa13.32□□□□□ -0.28
RNF4-202ENST00000502316 METTL21AQ8WXB1 218 aa13.32□□□□□ -0.28
RNF4-202ENST00000502316 TSLPQ969D9 159 aa13.32□□□□□ -0.28
RNF4-202ENST00000502316 C19orf60Q96EN9 201 aa13.32□□□□□ -0.28
RNF4-202ENST00000502316 VPS50Q96JG6 964 aa13.32□□□□□ -0.28
RNF4-202ENST00000502316 PRTFDC1Q9NRG1 225 aa13.32□□□□□ -0.28
RNF4-202ENST00000502316 C1orf109Q9NX04 203 aa13.32□□□□□ -0.28
RNF4-202ENST00000502316 TEX10Q9NXF1 929 aaPredicted RBP13.32□□□□□ -0.28
RNF4-202ENST00000502316 C19orf25Q9UFG5 118 aaPredicted RBP13.32□□□□□ -0.28
RNF4-202ENST00000502316 MAN2B2Q9Y2E5 1009 aa13.32□□□□□ -0.28
RNF4-202ENST00000502316 KCNMB2Q9Y691 235 aa13.32□□□□□ -0.28
RNF4-202ENST00000502316 IGSF10Q6WRI0 2623 aa13.32□□□□□ -0.28
RNF4-202ENST00000502316 ZFYVE26Q68DK2 2539 aa13.31□□□□□ -0.28
RNF4-202ENST00000502316 IGHV1-45A0A0A0MS14 117 aa13.31□□□□□ -0.28
RNF4-202ENST00000502316 TGFBR3LH3BV60 316 aa13.31□□□□□ -0.28
RNF4-202ENST00000502316 PEX12O00623 359 aa13.31□□□□□ -0.28
RNF4-202ENST00000502316 PCDH7O60245 1069 aa13.31□□□□□ -0.28
RNF4-202ENST00000502316 CTNSO60931 367 aa13.31□□□□□ -0.28
RNF4-202ENST00000502316 GUCY1B2O75343 617 aa13.31□□□□□ -0.28
RNF4-202ENST00000502316 SKAP2O75563 359 aaPredicted RBP13.31□□□□□ -0.28
RNF4-202ENST00000502316 AIFM1O95831 613 aa13.31□□□□□ -0.28
RNF4-202ENST00000502316 JUNP05412 331 aaKnown RBP13.31□□□□□ -0.28
RNF4-202ENST00000502316 NR2F6P10588 404 aa13.31□□□□□ -0.28
RNF4-202ENST00000502316 COX6A1P12074 109 aa13.31□□□□□ -0.28
RNF4-202ENST00000502316 TLX1P31314 330 aaPredicted RBP13.31□□□□□ -0.28
RNF4-202ENST00000502316 GSTM5P46439 218 aa13.31□□□□□ -0.28
RNF4-202ENST00000502316 NR6A1Q15406 480 aa13.31□□□□□ -0.28
RNF4-202ENST00000502316 DEFB109BQ30KR1 87 aa13.31□□□□□ -0.28
RNF4-202ENST00000502316 DCAF10Q5QP82 559 aa13.31□□□□□ -0.28
RNF4-202ENST00000502316 NDUFAF5Q5TEU4 345 aa13.31□□□□□ -0.28
RNF4-202ENST00000502316 C18orf63Q68DL7 685 aa13.31□□□□□ -0.28
RNF4-202ENST00000502316 RGS9BPQ6ZS82 235 aa13.31□□□□□ -0.28
RNF4-202ENST00000502316 ANKRD37Q7Z713 158 aa13.31□□□□□ -0.28
RNF4-202ENST00000502316 ARFGAP2Q8N6H7 521 aa13.31□□□□□ -0.28
RNF4-202ENST00000502316 TMEM102Q8N9M5 508 aaPredicted RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms