RNA–Protein interactions for RNA: ENST00000498205.5

SSR3-209, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 593 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-209ENST00000498205 ZNF148Q9UQR1 794 aa4.45□□□□□ -1.7
SSR3-209ENST00000498205 CHKBQ9Y259 395 aa4.45□□□□□ -1.7
SSR3-209ENST00000498205 C2CD2Q9Y426 696 aa4.45□□□□□ -1.7
SSR3-209ENST00000498205 BRCA1P38398 1863 aaKnown RBP4.45□□□□□ -1.7
SSR3-209ENST00000498205 COL11A1P12107 1806 aaPredicted RBP4.44□□□□□ -1.7
SSR3-209ENST00000498205 LRRC37A2A6NM11 1700 aa4.44□□□□□ -1.7
SSR3-209ENST00000498205 COL1A2P08123 1366 aa4.44□□□□□ -1.7
SSR3-209ENST00000498205 OR2M5A3KFT3 312 aa4.44□□□□□ -1.7
SSR3-209ENST00000498205 GOLGA8IPA6NC78 632 aa4.44□□□□□ -1.7
SSR3-209ENST00000498205 GOLGA8JA6NMD2 632 aa4.44□□□□□ -1.7
SSR3-209ENST00000498205 TMEM110-MUSTN1A8MSY1 372 aa4.44□□□□□ -1.7
SSR3-209ENST00000498205 VGLL3A8MV65 326 aa4.44□□□□□ -1.7
SSR3-209ENST00000498205 J3QR06 171 aa4.44□□□□□ -1.7
SSR3-209ENST00000498205 MCF2LO15068 1137 aa4.44□□□□□ -1.7
SSR3-209ENST00000498205 SLC22A2O15244 555 aa4.44□□□□□ -1.7
SSR3-209ENST00000498205 PLPP2O43688 288 aa4.44□□□□□ -1.7
SSR3-209ENST00000498205 MITFO75030 526 aaPredicted RBP4.44□□□□□ -1.7
SSR3-209ENST00000498205 LRCH4O75427 683 aa4.44□□□□□ -1.7
SSR3-209ENST00000498205 GH1P01241 217 aa4.44□□□□□ -1.7
SSR3-209ENST00000498205 KRT16P08779 473 aa4.44□□□□□ -1.7
SSR3-209ENST00000498205 RNF224P0DH78 156 aa4.44□□□□□ -1.7
SSR3-209ENST00000498205 TPBGLP0DKB5 382 aa4.44□□□□□ -1.7
SSR3-209ENST00000498205 FGF5P12034 268 aa4.44□□□□□ -1.7
SSR3-209ENST00000498205 TPSB2P20231 275 aa4.44□□□□□ -1.7
SSR3-209ENST00000498205 ATP6V1C1P21283 382 aa4.44□□□□□ -1.7
SSR3-209ENST00000498205 CA4P22748 312 aa4.44□□□□□ -1.7
SSR3-209ENST00000498205 KDELR1P24390 212 aa4.44□□□□□ -1.7
SSR3-209ENST00000498205 FOXN2P32314 431 aa4.44□□□□□ -1.7
SSR3-209ENST00000498205 SLCO1A2P46721 670 aa4.44□□□□□ -1.7
SSR3-209ENST00000498205 IFNAR2P48551 515 aa4.44□□□□□ -1.7
SSR3-209ENST00000498205 KCNJ2P63252 427 aa4.44□□□□□ -1.7
SSR3-209ENST00000498205 IRX1P78414 480 aaPredicted RBP4.44□□□□□ -1.7
SSR3-209ENST00000498205 CXCL9Q07325 125 aa4.44□□□□□ -1.7
SSR3-209ENST00000498205 SPOCK1Q08629 439 aa4.44□□□□□ -1.7
SSR3-209ENST00000498205 BAATQ14032 418 aaPredicted RBP4.44□□□□□ -1.7
SSR3-209ENST00000498205 TFDP1Q14186 410 aa4.44□□□□□ -1.7
SSR3-209ENST00000498205 KCNJ11Q14654 390 aa4.44□□□□□ -1.7
SSR3-209ENST00000498205 TPSAB1Q15661 275 aa4.44□□□□□ -1.7
SSR3-209ENST00000498205 MAPRE1Q15691 268 aaKnown RBP4.44□□□□□ -1.7
SSR3-209ENST00000498205 ANKRD20A2Q5SQ80 823 aa4.44□□□□□ -1.7
SSR3-209ENST00000498205 NDUFAF5Q5TEU4 345 aa4.44□□□□□ -1.7
SSR3-209ENST00000498205 ANKRD20A1Q5TYW2 823 aa4.44□□□□□ -1.7
SSR3-209ENST00000498205 HHATQ5VTY9 493 aa4.44□□□□□ -1.7
SSR3-209ENST00000498205 ANKRD20A3Q5VUR7 823 aa4.44□□□□□ -1.7
SSR3-209ENST00000498205 ADAM5Q6NVV9 412 aa4.44□□□□□ -1.7
SSR3-209ENST00000498205 IRGCQ6NXR0 463 aa4.44□□□□□ -1.7
SSR3-209ENST00000498205 BZW1Q7L1Q6 419 aaKnown RBP4.44□□□□□ -1.7
SSR3-209ENST00000498205 FASTKD5Q7L8L6 764 aaKnown RBP4.44□□□□□ -1.7
SSR3-209ENST00000498205 SLC26A11Q86WA9 606 aa4.44□□□□□ -1.7
SSR3-209ENST00000498205 LRRC6Q86X45 466 aa4.44□□□□□ -1.7
SSR3-209ENST00000498205 ERICH1Q86X53 443 aa4.44□□□□□ -1.7
SSR3-209ENST00000498205 CEP57Q86XR8 500 aa4.44□□□□□ -1.7
SSR3-209ENST00000498205 TMEM126BQ8IUX1 230 aa4.44□□□□□ -1.7
SSR3-209ENST00000498205 ZBTB8OSQ8IWT0 167 aa4.44□□□□□ -1.7
SSR3-209ENST00000498205 CIARTQ8N365 385 aaPredicted RBP4.44□□□□□ -1.7
SSR3-209ENST00000498205 OR10V1Q8NGI7 309 aa4.44□□□□□ -1.7
SSR3-209ENST00000498205 ACTL9Q8TC94 416 aa4.44□□□□□ -1.7
SSR3-209ENST00000498205 SEPT1Q8WYJ6 367 aa4.44□□□□□ -1.7
SSR3-209ENST00000498205 ZNF75CPQ92670 426 aaPredicted RBP4.44□□□□□ -1.7
SSR3-209ENST00000498205 N4BP2L2Q92802 583 aaPredicted RBP4.44□□□□□ -1.7
SSR3-209ENST00000498205 ERP27Q96DN0 273 aa4.44□□□□□ -1.7
SSR3-209ENST00000498205 ALG14Q96F25 216 aa4.44□□□□□ -1.7
SSR3-209ENST00000498205 C17orf77Q96MU5 243 aa4.44□□□□□ -1.7
SSR3-209ENST00000498205 GAD1Q99259 594 aa4.44□□□□□ -1.7
SSR3-209ENST00000498205 PAFAH2Q99487 392 aa4.44□□□□□ -1.7
SSR3-209ENST00000498205 CHCHD6Q9BRQ6 235 aa4.44□□□□□ -1.7
SSR3-209ENST00000498205 ZNF670Q9BS34 389 aa4.44□□□□□ -1.7
SSR3-209ENST00000498205 GCOM2Q9BZD3 368 aaPredicted RBP4.44□□□□□ -1.7
SSR3-209ENST00000498205 DNAI2Q9GZS0 605 aa4.44□□□□□ -1.7
SSR3-209ENST00000498205 RABEP2Q9H5N1 569 aa4.44□□□□□ -1.7
SSR3-209ENST00000498205 RPAP3Q9H6T3 665 aaPredicted RBP4.44□□□□□ -1.7
SSR3-209ENST00000498205 RAVER2Q9HCJ3 691 aaKnown RBP4.44□□□□□ -1.7
SSR3-209ENST00000498205 XAB2Q9HCS7 855 aaKnown RBP4.44□□□□□ -1.7
SSR3-209ENST00000498205 CISHQ9NSE2 258 aa4.44□□□□□ -1.7
SSR3-209ENST00000498205 STX18Q9P2W9 335 aaKnown RBP4.44□□□□□ -1.7
SSR3-209ENST00000498205 TEX264Q9Y6I9 313 aa4.44□□□□□ -1.7
SSR3-209ENST00000498205 PAPPA2Q9BXP8 1791 aa4.44□□□□□ -1.7
SSR3-209ENST00000498205 COL4A5P29400 1685 aa4.44□□□□□ -1.7
SSR3-209ENST00000498205 PTPRFP10586 1907 aa4.44□□□□□ -1.7
SSR3-209ENST00000498205 PTPRJQ12913 1337 aa4.44□□□□□ -1.7
SSR3-209ENST00000498205 ANK1P16157 1881 aa4.43□□□□□ -1.7
SSR3-209ENST00000498205 CLRN2A0PK11 232 aa4.43□□□□□ -1.7
SSR3-209ENST00000498205 LRRD1A4D1F6 860 aa4.43□□□□□ -1.7
SSR3-209ENST00000498205 PMS2P5A8MQ11 134 aa4.43□□□□□ -1.7
SSR3-209ENST00000498205 HACD1B0YJ81 288 aa4.43□□□□□ -1.7
SSR3-209ENST00000498205 F8VP50 259 aa4.43□□□□□ -1.7
SSR3-209ENST00000498205 TMEM189-UBE2V1I3L0A0 370 aa4.43□□□□□ -1.7
SSR3-209ENST00000498205 DDX39AO00148 427 aaKnown RBP4.43□□□□□ -1.7
SSR3-209ENST00000498205 PEX11AO75192 247 aa4.43□□□□□ -1.7
SSR3-209ENST00000498205 SNNO75324 88 aaPredicted RBP4.43□□□□□ -1.7
SSR3-209ENST00000498205 SLC25A27O95847 323 aa4.43□□□□□ -1.7
SSR3-209ENST00000498205 TNNC2P02585 160 aa4.43□□□□□ -1.7
SSR3-209ENST00000498205 C1QAP02745 245 aa4.43□□□□□ -1.7
SSR3-209ENST00000498205 H1F0P07305 194 aaKnown RBP4.43□□□□□ -1.7
SSR3-209ENST00000498205 SNRPAP09012 282 aaKnown RBP4.43□□□□□ -1.7
SSR3-209ENST00000498205 MCF2P10911 925 aa4.43□□□□□ -1.7
SSR3-209ENST00000498205 VDRP11473 427 aa4.43□□□□□ -1.7
SSR3-209ENST00000498205 KRT3P12035 628 aa4.43□□□□□ -1.7
SSR3-209ENST00000498205 SELLP14151 372 aa4.43□□□□□ -1.7
SSR3-209ENST00000498205 DCTP40126 519 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms