RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 LOC102724159A0A0B4J2E5 919 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 FAM170AA1A519 330 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 CTAGE15A4D2H0 777 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 FAM90A10PA6NDY2 464 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 FAM90A8PA6NJQ4 464 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 ZNF487B1APH4 448 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 TMEM178BH3BS89 294 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 H7C423 109 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 KIR2DS3K7RE56 304 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 LAD1O00515 517 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 PIP5K1BO14986 540 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 SLC16A3O15427 465 aaKnown RBP1.35□□□□□ -2.19
XRN1-214ENST00000498077 PRPF3O43395 683 aaKnown RBP1.35□□□□□ -2.19
XRN1-214ENST00000498077 SLC26A4O43511 780 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 ATP8B1O43520 1251 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 ZNF780AO75290 641 aaPredicted RBP1.35□□□□□ -2.19
XRN1-214ENST00000498077 LEFTY1O75610 366 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 UGT2B17O75795 530 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 CLPXO76031 633 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 RECQL5O94762 991 aaPredicted RBP1.35□□□□□ -2.19
XRN1-214ENST00000498077 NXPH2O95156 264 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 KAT7O95251 611 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 TGM6O95932 706 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 IGHV2-5P01817 119 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 HPXP02790 462 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 RNASE1P07998 156 aaKnown RBP1.35□□□□□ -2.19
XRN1-214ENST00000498077 ITGA5P08648 1049 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 FAM90A13PP0C7W8 464 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 FAM90A24PP0C7X0 464 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 SLC35E2P0CK97 266 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 TROVE2P10155 538 aaKnown RBP eCLIP1.35□□□□□ -2.19
XRN1-214ENST00000498077 MBL2P11226 248 aaPredicted RBP1.35□□□□□ -2.19
XRN1-214ENST00000498077 TCF4P15884 667 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 TPH1P17752 444 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 DCKP27707 260 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 SLC6A1P30531 599 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 SLC7A1P30825 629 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 CLK1P49759 484 aaKnown RBP1.35□□□□□ -2.19
XRN1-214ENST00000498077 BCAP31P51572 246 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 CCR4P51679 360 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 EPHB1P54762 984 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 AIF1P55008 147 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 CCL23P55773 120 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 ACTG2P63267 376 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 TNNC1P63316 161 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 RPP30P78346 268 aaKnown RBP1.35□□□□□ -2.19
XRN1-214ENST00000498077 HMGCS1Q01581 520 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 OGDHQ02218 1023 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 GNA12Q03113 381 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 ACY1Q03154 408 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 KHDRBS1Q07666 443 aaKnown RBP eCLIP1.35□□□□□ -2.19
XRN1-214ENST00000498077 AP1B1Q10567 949 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 SIM2Q14190 667 aaPredicted RBP1.35□□□□□ -2.19
XRN1-214ENST00000498077 FZD2Q14332 565 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 MEF2DQ14814 521 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 KIR2DS3Q14952 304 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 PWP2Q15269 919 aaKnown RBP1.35□□□□□ -2.19
XRN1-214ENST00000498077 RASA2Q15283 850 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 OASLQ15646 514 aaKnown RBP1.35□□□□□ -2.19
XRN1-214ENST00000498077 CRY1Q16526 586 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 VMA21Q3ZAQ7 101 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 ANXA2RQ3ZCQ2 193 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 Q4G0T1 1027 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 DDI2Q5TDH0 399 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 NXNL2Q5VZ03 156 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 POMZP3Q6PJE2 187 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 TEX261Q6UWH6 196 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 CYP4V2Q6ZWL3 525 aaPredicted RBP1.35□□□□□ -2.19
XRN1-214ENST00000498077 DET1Q7L5Y6 550 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 CTAGE6Q86UF2 777 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 TGIF2LYQ8IUE0 185 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 MKXQ8IYA7 352 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 SMRP1Q8NCR6 262 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 GMCL1P1Q8NEA9 526 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 ZNF548Q8NEK5 533 aaPredicted RBP1.35□□□□□ -2.19
XRN1-214ENST00000498077 OR6F1Q8NGZ6 308 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 LMX1AQ8TE12 382 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 UBLCP1Q8WVY7 318 aaPredicted RBP1.35□□□□□ -2.19
XRN1-214ENST00000498077 ARNTL2Q8WYA1 636 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 TM9SF4Q92544 642 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 CALML4Q96GE6 196 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 HSPA12BQ96MM6 686 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 FIZ1Q96SL8 496 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 CGRRF1Q99675 332 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 PLA2G12AQ9BZM1 189 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 KLHL4Q9C0H6 718 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 ANKRD2Q9GZV1 360 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 LINC00597Q9H2U6 94 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 LIN7CQ9NUP9 197 aaKnown RBP1.35□□□□□ -2.19
XRN1-214ENST00000498077 SIDT1Q9NXL6 827 aaKnown RBP1.35□□□□□ -2.19
XRN1-214ENST00000498077 C6orf203Q9P0P8 240 aaPredicted RBP1.35□□□□□ -2.19
XRN1-214ENST00000498077 OR12D3Q9UGF7 316 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 AGO2Q9UKV8 859 aaKnown RBP1.35□□□□□ -2.19
XRN1-214ENST00000498077 ACSL5Q9ULC5 683 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 C19orf53Q9UNZ5 99 aaPredicted RBP1.35□□□□□ -2.19
XRN1-214ENST00000498077 MTF2Q9Y483 593 aaPredicted RBP1.35□□□□□ -2.19
XRN1-214ENST00000498077 DUSP10Q9Y6W6 482 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 CPSF1Q10570 1443 aaKnown RBP1.35□□□□□ -2.19
XRN1-214ENST00000498077 ASXL3Q9C0F0 2248 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 TCF20Q9UGU0 1960 aaKnown RBP1.35□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms