RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 PRAMEF2O60811 474 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 MFAP3LO75121 409 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 USP12O75317 370 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 SCO1O75880 301 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 ACSL3O95573 720 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 IFNGP01579 166 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 HMBSP08397 361 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 OR52Z1P0C646 297 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 UROSP10746 265 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 DGKAP23743 735 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 UCP1P25874 307 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 CASRP41180 1078 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 NAA10P41227 235 aaPredicted RBP2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 NRIP1P48552 1158 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 KPNA2P52292 529 aaKnown RBP2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 BCAT1P54687 386 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 CDH13P55290 713 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 ERVK-25P63136 954 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 GPC5P78333 572 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 SIM1P81133 766 aaPredicted RBP2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 MYBPC1Q00872 1141 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 CNTN2Q02246 1040 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 MBTD1Q05BQ5 628 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 GRIK2Q13002 908 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 KRR1Q13601 381 aaKnown RBP2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 IL10RAQ13651 578 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 HNF4GQ14541 408 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 SLC15A2Q16348 729 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 CALCRLQ16602 461 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 ATP13A5Q4VNC0 1218 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 OR2B11Q5JQS5 317 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 SPANXN2Q5MJ10 180 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 PPM1LQ5SGD2 360 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 FAM46CQ5VWP2 391 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 KHDRBS2Q5VWX1 349 aaKnown RBP2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 CARD17Q5XLA6 110 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 FAM91A1Q658Y4 838 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 PRR5LQ6MZQ0 368 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 TMEM81Q6P7N7 255 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 VWA1Q6PCB0 445 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 ABHD15Q6UXT9 468 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 FAM92BQ6ZTR7 304 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 BBS12Q6ZW61 710 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 ADGRD2Q7Z7M1 963 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 GPR180Q86V85 440 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 ZNF808Q8N4W9 903 aaPredicted RBP2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 SLC15A4Q8N697 577 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 WDSUB1Q8N9V3 476 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 OR10H4Q8NGA5 316 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 OR9A2Q8NGT5 310 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 STOML3Q8TAV4 291 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 TRUB1Q8WWH5 349 aaKnown RBP2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 CACNG8Q8WXS5 425 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 NR4A3Q92570 626 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 AP3S1Q92572 193 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 RAB1CQ92928 201 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 EXTL1Q92935 676 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 PERPQ96FX8 193 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 NSL1Q96IY1 281 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 CLPTM1LQ96KA5 538 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 PPP3R2Q96LZ3 170 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 PRRC1Q96M27 445 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 SLITRK1Q96PX8 696 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 PANX1Q96RD7 426 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 TAAR6Q96RI8 345 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 TEAD3Q99594 435 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 C7orf50Q9BRJ6 194 aaKnown RBP2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 TMEM246Q9BRR3 403 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 NAT9Q9BTE0 207 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 ERVK-6Q9BXR3 956 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 MRPL13Q9BYD1 178 aaKnown RBP2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 MRPS26Q9BYN8 205 aaKnown RBP2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 PKIBQ9C010 78 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 GAREM1Q9H706 876 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 CHST11Q9NPF2 352 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 NIT2Q9NQR4 276 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 ENTPD7Q9NQZ7 604 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 ZDHHC7Q9NXF8 308 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 P4HTMQ9NXG6 502 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 COL20A1Q9P218 1284 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 LPAR3Q9UBY5 353 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 ZNF212Q9UDV6 495 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 PISDQ9UG56 409 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 SIX4Q9UIU6 781 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 MAP3K2Q9Y2U5 619 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 REXO2Q9Y3B8 237 aaKnown RBP2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 MMACHCQ9Y4U1 282 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 ASB1Q9Y576 335 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 U3KQV3 271 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 KDM5CP41229 1560 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 GOLGA3Q08378 1498 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 PRAG1Q86YV5 1406 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 A0A1W2PPV4 95 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 A0A1W2PRX2 142 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 UBE2QL1A1L167 161 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 A8MUI8 341 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 LEUTXA8MZ59 168 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 PATE3B3GLJ2 98 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 PRAMEF26H0Y7S4 382 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 ZNF185O15231 689 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms