RNA–Protein interactions for RNA: ENST00000496332.5

THBS3-208, Transcript of thrombospondin 3, humanhuman

TSL 3

Gene THBS3, Length 839 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-208ENST00000496332 PPIEQ9UNP9 301 aaKnown RBP11.05□□□□□ -0.64
THBS3-208ENST00000496332 RNF11Q9Y3C5 154 aa11.05□□□□□ -0.64
THBS3-208ENST00000496332 TSC22D4Q9Y3Q8 395 aa11.05□□□□□ -0.64
THBS3-208ENST00000496332 PCDHGA11Q9Y5H2 935 aa11.05□□□□□ -0.64
THBS3-208ENST00000496332 SPACA6W5XKT8 324 aa11.05□□□□□ -0.64
THBS3-208ENST00000496332 EXOC1LA0A1B0GW35 172 aa11.04□□□□□ -0.64
THBS3-208ENST00000496332 SYNDIG1LA6NDD5 238 aa11.04□□□□□ -0.64
THBS3-208ENST00000496332 H0YIV9 168 aa11.04□□□□□ -0.64
THBS3-208ENST00000496332 FCHO1O14526 889 aa11.04□□□□□ -0.64
THBS3-208ENST00000496332 OR7A17O14581 309 aa11.04□□□□□ -0.64
THBS3-208ENST00000496332 UGDHO60701 494 aa11.04□□□□□ -0.64
THBS3-208ENST00000496332 SMIM24O75264 130 aa11.04□□□□□ -0.64
THBS3-208ENST00000496332 SCELO95171 688 aa11.04□□□□□ -0.64
THBS3-208ENST00000496332 UNC5CO95185 931 aa11.04□□□□□ -0.64
THBS3-208ENST00000496332 COL6A2P12110 1019 aa11.04□□□□□ -0.64
THBS3-208ENST00000496332 CPN2P22792 545 aa11.04□□□□□ -0.64
THBS3-208ENST00000496332 PTX3P26022 381 aaPredicted RBP11.04□□□□□ -0.64
THBS3-208ENST00000496332 TRHRP34981 398 aaPredicted RBP11.04□□□□□ -0.64
THBS3-208ENST00000496332 CYB561P49447 251 aa11.04□□□□□ -0.64
THBS3-208ENST00000496332 HLCSP50747 726 aa11.04□□□□□ -0.64
THBS3-208ENST00000496332 GPR143P51810 404 aa11.04□□□□□ -0.64
THBS3-208ENST00000496332 RAP1GDS1P52306 607 aa11.04□□□□□ -0.64
THBS3-208ENST00000496332 RPS13P62277 151 aaKnown RBP11.04□□□□□ -0.64
THBS3-208ENST00000496332 SLAMF1Q13291 335 aa11.04□□□□□ -0.64
THBS3-208ENST00000496332 ELAVL1Q15717 326 aaKnown RBP11.04□□□□□ -0.64
THBS3-208ENST00000496332 CPSF6Q16630 551 aaKnown RBP eCLIP11.04□□□□□ -0.64
THBS3-208ENST00000496332 TSNAXIP1Q2TAA8 658 aa11.04□□□□□ -0.64
THBS3-208ENST00000496332 HIST2H2BCQ6DN03 193 aa11.04□□□□□ -0.64
THBS3-208ENST00000496332 GFRALQ6UXV0 394 aa11.04□□□□□ -0.64
THBS3-208ENST00000496332 GALNTL5Q7Z4T8 443 aa11.04□□□□□ -0.64
THBS3-208ENST00000496332 ARMC10Q8N2F6 343 aa11.04□□□□□ -0.64
THBS3-208ENST00000496332 TMEM132CQ8N3T6 1108 aa11.04□□□□□ -0.64
THBS3-208ENST00000496332 L3MBTL4Q8NA19 623 aa11.04□□□□□ -0.64
THBS3-208ENST00000496332 TMEM178AQ8NBL3 297 aa11.04□□□□□ -0.64
THBS3-208ENST00000496332 THAP3Q8WTV1 239 aaPredicted RBP11.04□□□□□ -0.64
THBS3-208ENST00000496332 NCLNQ969V3 563 aa11.04□□□□□ -0.64
THBS3-208ENST00000496332 REPS1Q96D71 796 aa11.04□□□□□ -0.64
THBS3-208ENST00000496332 VMP1Q96GC9 406 aa11.04□□□□□ -0.64
THBS3-208ENST00000496332 CCDC77Q9BR77 488 aa11.04□□□□□ -0.64
THBS3-208ENST00000496332 CENPKQ9BS16 269 aa11.04□□□□□ -0.64
THBS3-208ENST00000496332 NOL11Q9H8H0 719 aaKnown RBP11.04□□□□□ -0.64
THBS3-208ENST00000496332 DMRT3Q9NQL9 472 aa11.04□□□□□ -0.64
THBS3-208ENST00000496332 XPR1Q9UBH6 696 aa11.04□□□□□ -0.64
THBS3-208ENST00000496332 SEC14L3Q9UDX4 400 aa11.04□□□□□ -0.64
THBS3-208ENST00000496332 VTI1BQ9UEU0 232 aa11.04□□□□□ -0.64
THBS3-208ENST00000496332 ZNF223Q9UK11 482 aaPredicted RBP11.04□□□□□ -0.64
THBS3-208ENST00000496332 TMCO1Q9UM00 188 aa11.04□□□□□ -0.64
THBS3-208ENST00000496332 CLCA3PQ9Y6N3 262 aa11.04□□□□□ -0.64
THBS3-208ENST00000496332 SPTAN1Q13813 2472 aaKnown RBP11.03□□□□□ -0.64
THBS3-208ENST00000496332 STX16-NPEPL1H3BU86 382 aa11.03□□□□□ -0.64
THBS3-208ENST00000496332 PLPP1O14494 284 aa11.03□□□□□ -0.64
THBS3-208ENST00000496332 STX16O14662 325 aa11.03□□□□□ -0.64
THBS3-208ENST00000496332 LDB3O75112 727 aa11.03□□□□□ -0.64
THBS3-208ENST00000496332 SLC25A12O75746 678 aa11.03□□□□□ -0.64
THBS3-208ENST00000496332 WISP2O76076 250 aa11.03□□□□□ -0.64
THBS3-208ENST00000496332 ZFAND5O76080 213 aa11.03□□□□□ -0.64
THBS3-208ENST00000496332 CLDN9O95484 217 aa11.03□□□□□ -0.64
THBS3-208ENST00000496332 STSP08842 583 aa11.03□□□□□ -0.64
THBS3-208ENST00000496332 ABHD2P08910 425 aa11.03□□□□□ -0.64
THBS3-208ENST00000496332 SNRPAP09012 282 aaKnown RBP11.03□□□□□ -0.64
THBS3-208ENST00000496332 RHOXF2BP0C7M4 288 aa11.03□□□□□ -0.64
THBS3-208ENST00000496332 TNNI3P19429 210 aa11.03□□□□□ -0.64
THBS3-208ENST00000496332 ARL1P40616 181 aaPredicted RBP11.03□□□□□ -0.64
THBS3-208ENST00000496332 NEK2P51955 445 aa11.03□□□□□ -0.64
THBS3-208ENST00000496332 PHEXP78562 749 aa11.03□□□□□ -0.64
THBS3-208ENST00000496332 ID2Q02363 134 aa11.03□□□□□ -0.64
THBS3-208ENST00000496332 SERTAD2Q14140 314 aa11.03□□□□□ -0.64
THBS3-208ENST00000496332 ZRSR2Q15696 482 aaKnown RBP11.03□□□□□ -0.64
THBS3-208ENST00000496332 MAPKAPK3Q16644 382 aa11.03□□□□□ -0.64
THBS3-208ENST00000496332 LGSNQ5TDP6 509 aa11.03□□□□□ -0.64
THBS3-208ENST00000496332 C1QL3Q5VWW1 255 aa11.03□□□□□ -0.64
THBS3-208ENST00000496332 TRMT10CQ7L0Y3 403 aaKnown RBP11.03□□□□□ -0.64
THBS3-208ENST00000496332 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.03□□□□□ -0.64
THBS3-208ENST00000496332 GPR180Q86V85 440 aa11.03□□□□□ -0.64
THBS3-208ENST00000496332 ZNF227Q86WZ6 799 aa11.03□□□□□ -0.64
THBS3-208ENST00000496332 OR52B6Q8NGF0 335 aa11.03□□□□□ -0.64
THBS3-208ENST00000496332 PTPMT1Q8WUK0 201 aaPredicted RBP11.03□□□□□ -0.64
THBS3-208ENST00000496332 DAZLQ92904 295 aaKnown RBP11.03□□□□□ -0.64
THBS3-208ENST00000496332 ATP6V1E2Q96A05 226 aa11.03□□□□□ -0.64
THBS3-208ENST00000496332 ANKRD9Q96BM1 317 aaPredicted RBP11.03□□□□□ -0.64
THBS3-208ENST00000496332 CDK15Q96Q40 435 aa11.03□□□□□ -0.64
THBS3-208ENST00000496332 MRPL57Q9BQC6 102 aaKnown RBP11.03□□□□□ -0.64
THBS3-208ENST00000496332 RHOXF2Q9BQY4 288 aa11.03□□□□□ -0.64
THBS3-208ENST00000496332 TRIM45Q9H8W5 580 aaPredicted RBP11.03□□□□□ -0.64
THBS3-208ENST00000496332 PCTPQ9UKL6 214 aa11.03□□□□□ -0.64
THBS3-208ENST00000496332 HIVEP3Q5T1R4 2406 aa11.03□□□□□ -0.64
THBS3-208ENST00000496332 MAST4O15021 2626 aa11.02□□□□□ -0.65
THBS3-208ENST00000496332 A0A1B0GUH1 482 aa11.02□□□□□ -0.65
THBS3-208ENST00000496332 ASPDHA6ND91 283 aa11.02□□□□□ -0.65
THBS3-208ENST00000496332 C17orf105B2RV13 164 aa11.02□□□□□ -0.65
THBS3-208ENST00000496332 RIPK2O43353 540 aa11.02□□□□□ -0.65
THBS3-208ENST00000496332 PRKNO60260 465 aaPredicted RBP11.02□□□□□ -0.65
THBS3-208ENST00000496332 NME2P1O60361 137 aa11.02□□□□□ -0.65
THBS3-208ENST00000496332 ITGA10O75578 1167 aa11.02□□□□□ -0.65
THBS3-208ENST00000496332 ETHE1O95571 254 aa11.02□□□□□ -0.65
THBS3-208ENST00000496332 CLDN1O95832 211 aa11.02□□□□□ -0.65
THBS3-208ENST00000496332 FAM153BP0C7A2 387 aa11.02□□□□□ -0.65
THBS3-208ENST00000496332 NME2P22392 152 aa11.02□□□□□ -0.65
THBS3-208ENST00000496332 GCAP28676 217 aa11.02□□□□□ -0.65
THBS3-208ENST00000496332 CCNG1P51959 295 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms