RNA–Protein interactions for RNA: ENST00000495519.1

KDM5C-213, Transcript of lysine demethylase 5C, human

TSL 3

Gene KDM5C, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KDM5C-213	ENST00000495519	RHOXF2	Q9BQY4	288 aa		10.85	□□□□□ -0.67
KDM5C-213	ENST00000495519	MRPL46	Q9H2W6	279 aa	Known RBP	10.85	□□□□□ -0.67
KDM5C-213	ENST00000495519	OR51B5	Q9H339	312 aa		10.85	□□□□□ -0.67
KDM5C-213	ENST00000495519	DMRT3	Q9NQL9	472 aa		10.85	□□□□□ -0.67
KDM5C-213	ENST00000495519	ZNF358	Q9NW07	568 aa		10.85	□□□□□ -0.67
KDM5C-213	ENST00000495519	MS4A12	Q9NXJ0	267 aa		10.85	□□□□□ -0.67
KDM5C-213	ENST00000495519	ANKRD10	Q9NXR5	420 aa		10.85	□□□□□ -0.67
KDM5C-213	ENST00000495519	KCMF1	Q9P0J7	381 aa		10.85	□□□□□ -0.67
KDM5C-213	ENST00000495519	LRFN1	Q9P244	771 aa		10.85	□□□□□ -0.67
KDM5C-213	ENST00000495519	ERRFI1	Q9UJM3	462 aa	Predicted RBP	10.85	□□□□□ -0.67
KDM5C-213	ENST00000495519	CLDN16	Q9Y5I7	305 aa		10.85	□□□□□ -0.67
KDM5C-213	ENST00000495519	CLCA3P	Q9Y6N3	262 aa		10.85	□□□□□ -0.67
KDM5C-213	ENST00000495519	LRRK2	Q5S007	2527 aa		10.85	□□□□□ -0.67
KDM5C-213	ENST00000495519	TRBV11-1	A0A0K0K1C0	115 aa		10.84	□□□□□ -0.67
KDM5C-213	ENST00000495519	LRRC14B	A6NHZ5	514 aa		10.84	□□□□□ -0.67
KDM5C-213	ENST00000495519	TGFBR3L	H3BV60	316 aa		10.84	□□□□□ -0.67
KDM5C-213	ENST00000495519	SAP18	O00422	153 aa	Known RBP	10.84	□□□□□ -0.67
KDM5C-213	ENST00000495519	RTCA	O00442	366 aa	Known RBP	10.84	□□□□□ -0.67
KDM5C-213	ENST00000495519	RIPK2	O43353	540 aa		10.84	□□□□□ -0.67
KDM5C-213	ENST00000495519	CLDN9	O95484	217 aa		10.84	□□□□□ -0.67
KDM5C-213	ENST00000495519	CPN2	P22792	545 aa		10.84	□□□□□ -0.67
KDM5C-213	ENST00000495519	TPP2	P29144	1249 aa	Predicted RBP	10.84	□□□□□ -0.67
KDM5C-213	ENST00000495519	TLX1	P31314	330 aa	Predicted RBP	10.84	□□□□□ -0.67
KDM5C-213	ENST00000495519	TDGF1P3	P51864	188 aa		10.84	□□□□□ -0.67
KDM5C-213	ENST00000495519	CCNG1	P51959	295 aa		10.84	□□□□□ -0.67
KDM5C-213	ENST00000495519	CUL3	Q13618	768 aa		10.84	□□□□□ -0.67
KDM5C-213	ENST00000495519	C10orf62	Q5T681	223 aa	Predicted RBP	10.84	□□□□□ -0.67
KDM5C-213	ENST00000495519	SPINK14	Q6IE38	97 aa		10.84	□□□□□ -0.67
KDM5C-213	ENST00000495519	ADGRD1	Q6QNK2	874 aa		10.84	□□□□□ -0.67
KDM5C-213	ENST00000495519	ARMC10	Q8N2F6	343 aa		10.84	□□□□□ -0.67
KDM5C-213	ENST00000495519	ZCCHC7	Q8N3Z6	543 aa	Known RBP	10.84	□□□□□ -0.67
KDM5C-213	ENST00000495519	FAM98A	Q8NCA5	519 aa	Known RBP	10.84	□□□□□ -0.67
KDM5C-213	ENST00000495519	OR14A16	Q8NHC5	309 aa		10.84	□□□□□ -0.67
KDM5C-213	ENST00000495519	DAZL	Q92904	295 aa	Known RBP	10.84	□□□□□ -0.67
KDM5C-213	ENST00000495519	NCLN	Q969V3	563 aa		10.84	□□□□□ -0.67
KDM5C-213	ENST00000495519	PHF21B	Q96EK2	531 aa		10.84	□□□□□ -0.67
KDM5C-213	ENST00000495519	SCMH1	Q96GD3	660 aa		10.84	□□□□□ -0.67
KDM5C-213	ENST00000495519	MAPKAP1	Q9BPZ7	522 aa		10.84	□□□□□ -0.67
KDM5C-213	ENST00000495519	CCDC77	Q9BR77	488 aa		10.84	□□□□□ -0.67
KDM5C-213	ENST00000495519	ALOXE3	Q9BYJ1	711 aa		10.84	□□□□□ -0.67
KDM5C-213	ENST00000495519	NOL11	Q9H8H0	719 aa	Known RBP	10.84	□□□□□ -0.67
KDM5C-213	ENST00000495519	KLHL1	Q9NR64	748 aa		10.84	□□□□□ -0.67
KDM5C-213	ENST00000495519	PSD3	Q9NYI0	1048 aa		10.84	□□□□□ -0.67
KDM5C-213	ENST00000495519	VTI1B	Q9UEU0	232 aa		10.84	□□□□□ -0.67
KDM5C-213	ENST00000495519	FETUB	Q9UGM5	382 aa		10.84	□□□□□ -0.67
KDM5C-213	ENST00000495519	PHF11	Q9UIL8	331 aa		10.84	□□□□□ -0.67
KDM5C-213	ENST00000495519	OSGIN2	Q9Y236	505 aa		10.84	□□□□□ -0.67
KDM5C-213	ENST00000495519	RNF11	Q9Y3C5	154 aa		10.84	□□□□□ -0.67
KDM5C-213	ENST00000495519	PTPN13	Q12923	2485 aa		10.84	□□□□□ -0.67
KDM5C-213	ENST00000495519	SETX	Q7Z333	2677 aa	Known RBP	10.84	□□□□□ -0.67
KDM5C-213	ENST00000495519	HECTD1	Q9ULT8	2610 aa		10.84	□□□□□ -0.67
KDM5C-213	ENST00000495519	PRRC2C	Q9Y520	2896 aa	Known RBP	10.83	□□□□□ -0.68
KDM5C-213	ENST00000495519	COL12A1	Q99715	3063 aa		10.83	□□□□□ -0.68
KDM5C-213	ENST00000495519	IQANK1	A0A1B0GTG1	560 aa		10.83	□□□□□ -0.68
KDM5C-213	ENST00000495519	FOXE1	O00358	373 aa	Predicted RBP	10.83	□□□□□ -0.68
KDM5C-213	ENST00000495519	PLPP1	O14494	284 aa		10.83	□□□□□ -0.68
KDM5C-213	ENST00000495519	OR7A17	O14581	309 aa		10.83	□□□□□ -0.68
KDM5C-213	ENST00000495519	SLC25A12	O75746	678 aa		10.83	□□□□□ -0.68
KDM5C-213	ENST00000495519	NEURL1	O76050	574 aa		10.83	□□□□□ -0.68
KDM5C-213	ENST00000495519	MLYCD	O95822	493 aa		10.83	□□□□□ -0.68
KDM5C-213	ENST00000495519	SP1	P08047	785 aa		10.83	□□□□□ -0.68
KDM5C-213	ENST00000495519	PPP2R1B	P30154	601 aa		10.83	□□□□□ -0.68
KDM5C-213	ENST00000495519	TRHR	P34981	398 aa	Predicted RBP	10.83	□□□□□ -0.68
KDM5C-213	ENST00000495519	HLCS	P50747	726 aa		10.83	□□□□□ -0.68
KDM5C-213	ENST00000495519	GPR143	P51810	404 aa		10.83	□□□□□ -0.68
KDM5C-213	ENST00000495519	PER3	P56645	1201 aa		10.83	□□□□□ -0.68
KDM5C-213	ENST00000495519	RPS13	P62277	151 aa	Known RBP	10.83	□□□□□ -0.68
KDM5C-213	ENST00000495519	SLAMF1	Q13291	335 aa		10.83	□□□□□ -0.68
KDM5C-213	ENST00000495519	ZRSR2	Q15696	482 aa	Known RBP	10.83	□□□□□ -0.68
KDM5C-213	ENST00000495519	C4orf17	Q53FE4	359 aa		10.83	□□□□□ -0.68
KDM5C-213	ENST00000495519	SLC25A25	Q6KCM7	469 aa		10.83	□□□□□ -0.68
KDM5C-213	ENST00000495519	GFRAL	Q6UXV0	394 aa		10.83	□□□□□ -0.68
KDM5C-213	ENST00000495519	TIFAB	Q6ZNK6	161 aa		10.83	□□□□□ -0.68
KDM5C-213	ENST00000495519	GPR180	Q86V85	440 aa		10.83	□□□□□ -0.68
KDM5C-213	ENST00000495519	LCA5	Q86VQ0	697 aa		10.83	□□□□□ -0.68
KDM5C-213	ENST00000495519	EIF1AD	Q8N9N8	165 aa	Known RBP	10.83	□□□□□ -0.68
KDM5C-213	ENST00000495519	MORN4	Q8NDC4	146 aa		10.83	□□□□□ -0.68
KDM5C-213	ENST00000495519	OR52B6	Q8NGF0	335 aa		10.83	□□□□□ -0.68
KDM5C-213	ENST00000495519	TMEM125	Q96AQ2	219 aa		10.83	□□□□□ -0.68
KDM5C-213	ENST00000495519	NTMT1	Q9BV86	223 aa		10.83	□□□□□ -0.68
KDM5C-213	ENST00000495519	SORBS1	Q9BX66	1292 aa	Known RBP	10.83	□□□□□ -0.68
KDM5C-213	ENST00000495519	TRIM45	Q9H8W5	580 aa	Predicted RBP	10.83	□□□□□ -0.68
KDM5C-213	ENST00000495519	PCTP	Q9UKL6	214 aa		10.83	□□□□□ -0.68
KDM5C-213	ENST00000495519	FBXW2	Q9UKT8	454 aa		10.83	□□□□□ -0.68
KDM5C-213	ENST00000495519	PPT2	Q9UMR5	302 aa		10.83	□□□□□ -0.68
KDM5C-213	ENST00000495519		A0A1B0GUH1	482 aa		10.82	□□□□□ -0.68
KDM5C-213	ENST00000495519	ASPDH	A6ND91	283 aa		10.82	□□□□□ -0.68
KDM5C-213	ENST00000495519	WIPF3	A6NGB9	483 aa		10.82	□□□□□ -0.68
KDM5C-213	ENST00000495519	C17orf105	B2RV13	164 aa		10.82	□□□□□ -0.68
KDM5C-213	ENST00000495519	LDB3	O75112	727 aa		10.82	□□□□□ -0.68
KDM5C-213	ENST00000495519	ZFAND5	O76080	213 aa		10.82	□□□□□ -0.68
KDM5C-213	ENST00000495519	SEMA3D	O95025	777 aa		10.82	□□□□□ -0.68
KDM5C-213	ENST00000495519	OTC	P00480	354 aa		10.82	□□□□□ -0.68
KDM5C-213	ENST00000495519	LDLR	P01130	860 aa		10.82	□□□□□ -0.68
KDM5C-213	ENST00000495519	RPS17	P08708	135 aa	Known RBP	10.82	□□□□□ -0.68
KDM5C-213	ENST00000495519	STS	P08842	583 aa		10.82	□□□□□ -0.68
KDM5C-213	ENST00000495519	FAM153B	P0C7A2	387 aa		10.82	□□□□□ -0.68
KDM5C-213	ENST00000495519	COX7A2	P14406	83 aa		10.82	□□□□□ -0.68
KDM5C-213	ENST00000495519	TNNI3	P19429	210 aa		10.82	□□□□□ -0.68
KDM5C-213	ENST00000495519	TAC1	P20366	129 aa		10.82	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms