RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 ADAMTS17Q8TE56 1095 aa16.11■□□□□ 0.17
HDAC6-235ENST00000495515 APIPQ96GX9 242 aa16.11■□□□□ 0.17
HDAC6-235ENST00000495515 PPP3R2Q96LZ3 170 aa16.11■□□□□ 0.17
HDAC6-235ENST00000495515 MAGEB18Q96M61 343 aa16.11■□□□□ 0.17
HDAC6-235ENST00000495515 TUBB1Q9H4B7 451 aa16.11■□□□□ 0.17
HDAC6-235ENST00000495515 LRTM1Q9HBL6 345 aa16.11■□□□□ 0.17
HDAC6-235ENST00000495515 PRDM9Q9NQV7 894 aa16.11■□□□□ 0.17
HDAC6-235ENST00000495515 PRTFDC1Q9NRG1 225 aa16.11■□□□□ 0.17
HDAC6-235ENST00000495515 C1orf109Q9NX04 203 aa16.11■□□□□ 0.17
HDAC6-235ENST00000495515 ANKRD11Q6UB99 2663 aaPredicted RBP16.11■□□□□ 0.17
HDAC6-235ENST00000495515 GNG14A0A1W2PPG7 69 aa16.1■□□□□ 0.17
HDAC6-235ENST00000495515 FAM227AF5H4B4 570 aa16.1■□□□□ 0.17
HDAC6-235ENST00000495515 CYR61O00622 381 aa16.1■□□□□ 0.17
HDAC6-235ENST00000495515 TMPRSS11DO60235 418 aa16.1■□□□□ 0.17
HDAC6-235ENST00000495515 PCDH7O60245 1069 aa16.1■□□□□ 0.17
HDAC6-235ENST00000495515 GBAP04062 536 aa16.1■□□□□ 0.17
HDAC6-235ENST00000495515 ACPPP15309 386 aa16.1■□□□□ 0.17
HDAC6-235ENST00000495515 PPP2R1BP30154 601 aa16.1■□□□□ 0.17
HDAC6-235ENST00000495515 TIA1P31483 386 aaKnown RBP eCLIP16.1■□□□□ 0.17
HDAC6-235ENST00000495515 HK2P52789 917 aa16.1■□□□□ 0.17
HDAC6-235ENST00000495515 FOXL2P58012 376 aa16.1■□□□□ 0.17
HDAC6-235ENST00000495515 OCRLQ01968 901 aa16.1■□□□□ 0.17
HDAC6-235ENST00000495515 TNFRSF17Q02223 184 aa16.1■□□□□ 0.17
HDAC6-235ENST00000495515 SLC13A2Q13183 592 aa16.1■□□□□ 0.17
HDAC6-235ENST00000495515 NSDHLQ15738 373 aa16.1■□□□□ 0.17
HDAC6-235ENST00000495515 PDCD2Q16342 344 aaPredicted RBP16.1■□□□□ 0.17
HDAC6-235ENST00000495515 PPP1R32Q7Z5V6 425 aa16.1■□□□□ 0.17
HDAC6-235ENST00000495515 MRGPREQ86SM8 312 aa16.1■□□□□ 0.17
HDAC6-235ENST00000495515 CKAP2Q8WWK9 683 aa16.1■□□□□ 0.17
HDAC6-235ENST00000495515 C19orf60Q96EN9 201 aa16.1■□□□□ 0.17
HDAC6-235ENST00000495515 FER1L6-AS2Q96M78 137 aa16.1■□□□□ 0.17
HDAC6-235ENST00000495515 C7orf26Q96N11 449 aa16.1■□□□□ 0.17
HDAC6-235ENST00000495515 PTCHD1Q96NR3 888 aa16.1■□□□□ 0.17
HDAC6-235ENST00000495515 FAIM2Q9BWQ8 316 aa16.1■□□□□ 0.17
HDAC6-235ENST00000495515 RPF2Q9H7B2 306 aaKnown RBP16.1■□□□□ 0.17
HDAC6-235ENST00000495515 VTI1BQ9UEU0 232 aa16.1■□□□□ 0.17
HDAC6-235ENST00000495515 TMED5Q9Y3A6 229 aa16.1■□□□□ 0.17
HDAC6-235ENST00000495515 CCL27Q9Y4X3 112 aa16.1■□□□□ 0.17
HDAC6-235ENST00000495515 ASB4Q9Y574 426 aa16.1■□□□□ 0.17
HDAC6-235ENST00000495515 FREM2Q5SZK8 3169 aa16.1■□□□□ 0.17
HDAC6-235ENST00000495515 PROM1O43490 865 aa16.09■□□□□ 0.17
HDAC6-235ENST00000495515 CTNSO60931 367 aa16.09■□□□□ 0.17
HDAC6-235ENST00000495515 ANXA4P09525 319 aaPredicted RBP16.09■□□□□ 0.17
HDAC6-235ENST00000495515 NR2F6P10588 404 aa16.09■□□□□ 0.17
HDAC6-235ENST00000495515 MAPK1P28482 360 aa16.09■□□□□ 0.17
HDAC6-235ENST00000495515 RRADP55042 308 aa16.09■□□□□ 0.17
HDAC6-235ENST00000495515 HNRNPH2P55795 449 aaKnown RBP16.09■□□□□ 0.17
HDAC6-235ENST00000495515 RHAGQ02094 409 aa16.09■□□□□ 0.17
HDAC6-235ENST00000495515 ATP6AP1LQ52LC2 224 aa16.09■□□□□ 0.17
HDAC6-235ENST00000495515 XKR7Q5GH72 579 aa16.09■□□□□ 0.17
HDAC6-235ENST00000495515 FAAH2Q6GMR7 532 aa16.09■□□□□ 0.17
HDAC6-235ENST00000495515 TMEM205Q6UW68 189 aa16.09■□□□□ 0.17
HDAC6-235ENST00000495515 Q6ZSR9 355 aa16.09■□□□□ 0.17
HDAC6-235ENST00000495515 GPR155Q7Z3F1 870 aa16.09■□□□□ 0.17
HDAC6-235ENST00000495515 TANKQ92844 425 aa16.09■□□□□ 0.17
HDAC6-235ENST00000495515 TUBGCP3Q96CW5 907 aa16.09■□□□□ 0.17
HDAC6-235ENST00000495515 CSF3RQ99062 836 aa16.09■□□□□ 0.17
HDAC6-235ENST00000495515 PNPOQ9NVS9 261 aa16.09■□□□□ 0.17
HDAC6-235ENST00000495515 P4HTMQ9NXG6 502 aa16.09■□□□□ 0.17
HDAC6-235ENST00000495515 RALYQ9UKM9 306 aaKnown RBP16.09■□□□□ 0.17
HDAC6-235ENST00000495515 MAN2B2Q9Y2E5 1009 aa16.09■□□□□ 0.17
HDAC6-235ENST00000495515 WBP11Q9Y2W2 641 aaKnown RBP16.09■□□□□ 0.17
HDAC6-235ENST00000495515 ATG4BQ9Y4P1 393 aa16.09■□□□□ 0.17
HDAC6-235ENST00000495515 PTGDR2Q9Y5Y4 395 aa16.09■□□□□ 0.17
HDAC6-235ENST00000495515 HS3ST3B1Q9Y662 390 aa16.09■□□□□ 0.17
HDAC6-235ENST00000495515 FER1L5A0AVI2 2057 aa16.09■□□□□ 0.17
HDAC6-235ENST00000495515 PKD1L2Q7Z442 2459 aa16.08■□□□□ 0.17
HDAC6-235ENST00000495515 TRPC5OSA6NMA1 111 aa16.08■□□□□ 0.16
HDAC6-235ENST00000495515 LSM1O15116 133 aaKnown RBP16.08■□□□□ 0.16
HDAC6-235ENST00000495515 HDAC3O15379 428 aa16.08■□□□□ 0.16
HDAC6-235ENST00000495515 VPS4BO75351 444 aa16.08■□□□□ 0.16
HDAC6-235ENST00000495515 STX4Q12846 297 aa16.08■□□□□ 0.16
HDAC6-235ENST00000495515 BIKQ13323 160 aa16.08■□□□□ 0.16
HDAC6-235ENST00000495515 DEFB109BQ30KR1 87 aa16.08■□□□□ 0.16
HDAC6-235ENST00000495515 GALNTL6Q49A17 601 aa16.08■□□□□ 0.16
HDAC6-235ENST00000495515 ATP1A1-AS1Q5TC04 95 aa16.08■□□□□ 0.16
HDAC6-235ENST00000495515 OR52E8Q6IFG1 317 aa16.08■□□□□ 0.16
HDAC6-235ENST00000495515 TMEM102Q8N9M5 508 aaPredicted RBP16.08■□□□□ 0.16
HDAC6-235ENST00000495515 OR2T11Q8NH01 316 aa16.08■□□□□ 0.16
HDAC6-235ENST00000495515 PIWIL2Q8TC59 973 aaKnown RBP16.08■□□□□ 0.16
HDAC6-235ENST00000495515 C11orf24Q96F05 449 aaPredicted RBP16.08■□□□□ 0.16
HDAC6-235ENST00000495515 PSME2Q9UL46 239 aa16.08■□□□□ 0.16
HDAC6-235ENST00000495515 CFAP47Q6ZTR5 3102 aa16.08■□□□□ 0.16
HDAC6-235ENST00000495515 ASPMQ8IZT6 3477 aa16.08■□□□□ 0.16
HDAC6-235ENST00000495515 SCN3AQ9NY46 2000 aa16.07■□□□□ 0.16
HDAC6-235ENST00000495515 LOC102723996A0A087X1L8 192 aa16.07■□□□□ 0.16
HDAC6-235ENST00000495515 A0A1W2PR48 441 aa16.07■□□□□ 0.16
HDAC6-235ENST00000495515 C1orf226A1L170 272 aa16.07■□□□□ 0.16
HDAC6-235ENST00000495515 SOCS6O14544 535 aa16.07■□□□□ 0.16
HDAC6-235ENST00000495515 AIFM1O95831 613 aa16.07■□□□□ 0.16
HDAC6-235ENST00000495515 ITGB2P05107 769 aa16.07■□□□□ 0.16
HDAC6-235ENST00000495515 FURINP09958 794 aa16.07■□□□□ 0.16
HDAC6-235ENST00000495515 RPL38P63173 70 aaKnown RBP16.07■□□□□ 0.16
HDAC6-235ENST00000495515 RAE1P78406 368 aaKnown RBP16.07■□□□□ 0.16
HDAC6-235ENST00000495515 BTG2P78543 158 aa16.07■□□□□ 0.16
HDAC6-235ENST00000495515 ACTN3Q08043 901 aaPredicted RBP16.07■□□□□ 0.16
HDAC6-235ENST00000495515 ZNF763Q0D2J5 394 aa16.07■□□□□ 0.16
HDAC6-235ENST00000495515 MAD2L1Q13257 205 aaPredicted RBP16.07■□□□□ 0.16
HDAC6-235ENST00000495515 ATP1A4Q13733 1029 aa16.07■□□□□ 0.16
HDAC6-235ENST00000495515 SERTAD2Q14140 314 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms