RNA–Protein interactions for RNA: ENST00000495434.1

MRPL55-232, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 224 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-232ENST00000495434 CLDN9O95484 217 aa13.1□□□□□ -0.31
MRPL55-232ENST00000495434 TRHRP34981 398 aaPredicted RBP13.1□□□□□ -0.31
MRPL55-232ENST00000495434 SSR2P43308 183 aa13.1□□□□□ -0.31
MRPL55-232ENST00000495434 GPR143P51810 404 aa13.1□□□□□ -0.31
MRPL55-232ENST00000495434 RAP1GDS1P52306 607 aa13.1□□□□□ -0.31
MRPL55-232ENST00000495434 MLF1P58340 268 aa13.1□□□□□ -0.31
MRPL55-232ENST00000495434 BIKQ13323 160 aa13.1□□□□□ -0.31
MRPL55-232ENST00000495434 OR1C1Q15619 314 aa13.1□□□□□ -0.31
MRPL55-232ENST00000495434 ELAVL1Q15717 326 aaKnown RBP13.1□□□□□ -0.31
MRPL55-232ENST00000495434 CPSF6Q16630 551 aaKnown RBP eCLIP13.1□□□□□ -0.31
MRPL55-232ENST00000495434 MYLK4Q86YV6 388 aaPredicted RBP13.1□□□□□ -0.31
MRPL55-232ENST00000495434 ZCCHC7Q8N3Z6 543 aaKnown RBP13.1□□□□□ -0.31
MRPL55-232ENST00000495434 TMEM151AQ8N4L1 468 aa13.1□□□□□ -0.31
MRPL55-232ENST00000495434 KIF2BQ8N4N8 673 aa13.1□□□□□ -0.31
MRPL55-232ENST00000495434 DAZLQ92904 295 aaKnown RBP13.1□□□□□ -0.31
MRPL55-232ENST00000495434 VMP1Q96GC9 406 aa13.1□□□□□ -0.31
MRPL55-232ENST00000495434 SCMH1Q96GD3 660 aa13.1□□□□□ -0.31
MRPL55-232ENST00000495434 SIGLEC12Q96PQ1 595 aa13.1□□□□□ -0.31
MRPL55-232ENST00000495434 MTERF1Q99551 399 aaKnown RBP13.1□□□□□ -0.31
MRPL55-232ENST00000495434 MAPKAP1Q9BPZ7 522 aa13.1□□□□□ -0.31
MRPL55-232ENST00000495434 C1QTNF3Q9BXJ4 246 aa13.1□□□□□ -0.31
MRPL55-232ENST00000495434 ALOXE3Q9BYJ1 711 aa13.1□□□□□ -0.31
MRPL55-232ENST00000495434 DEFB126Q9BYW3 111 aa13.1□□□□□ -0.31
MRPL55-232ENST00000495434 OR51B5Q9H339 312 aa13.1□□□□□ -0.31
MRPL55-232ENST00000495434 NOL11Q9H8H0 719 aaKnown RBP13.1□□□□□ -0.31
MRPL55-232ENST00000495434 L2HGDHQ9H9P8 463 aa13.1□□□□□ -0.31
MRPL55-232ENST00000495434 PRM3Q9NNZ6 103 aa13.1□□□□□ -0.31
MRPL55-232ENST00000495434 PNO1Q9NRX1 252 aaKnown RBP13.1□□□□□ -0.31
MRPL55-232ENST00000495434 PCTPQ9UKL6 214 aa13.1□□□□□ -0.31
MRPL55-232ENST00000495434 IQANK1A0A1B0GTG1 560 aa13.09□□□□□ -0.31
MRPL55-232ENST00000495434 RTCAO00442 366 aaKnown RBP13.09□□□□□ -0.31
MRPL55-232ENST00000495434 PLPP1O14494 284 aa13.09□□□□□ -0.31
MRPL55-232ENST00000495434 OR7A17O14581 309 aa13.09□□□□□ -0.31
MRPL55-232ENST00000495434 MAN1A2O60476 641 aa13.09□□□□□ -0.31
MRPL55-232ENST00000495434 FAM153BP0C7A2 387 aa13.09□□□□□ -0.31
MRPL55-232ENST00000495434 CD46P15529 392 aa13.09□□□□□ -0.31
MRPL55-232ENST00000495434 CPN2P22792 545 aa13.09□□□□□ -0.31
MRPL55-232ENST00000495434 TPP2P29144 1249 aaPredicted RBP13.09□□□□□ -0.31
MRPL55-232ENST00000495434 TDGF1P3P51864 188 aa13.09□□□□□ -0.31
MRPL55-232ENST00000495434 CCNG1P51959 295 aa13.09□□□□□ -0.31
MRPL55-232ENST00000495434 RPS13P62277 151 aaKnown RBP13.09□□□□□ -0.31
MRPL55-232ENST00000495434 STX4Q12846 297 aa13.09□□□□□ -0.31
MRPL55-232ENST00000495434 SLAMF1Q13291 335 aa13.09□□□□□ -0.31
MRPL55-232ENST00000495434 DDX39BQ13838 428 aaKnown RBP13.09□□□□□ -0.31
MRPL55-232ENST00000495434 SLC29A2Q14542 456 aa13.09□□□□□ -0.31
MRPL55-232ENST00000495434 FAM153CQ494X1 144 aa13.09□□□□□ -0.31
MRPL55-232ENST00000495434 GGTA1PQ4G0N0 100 aa13.09□□□□□ -0.31
MRPL55-232ENST00000495434 TMEM178AQ8NBL3 297 aa13.09□□□□□ -0.31
MRPL55-232ENST00000495434 MORN4Q8NDC4 146 aa13.09□□□□□ -0.31
MRPL55-232ENST00000495434 OR14A16Q8NHC5 309 aa13.09□□□□□ -0.31
MRPL55-232ENST00000495434 ACMSDQ8TDX5 336 aa13.09□□□□□ -0.31
MRPL55-232ENST00000495434 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.09□□□□□ -0.31
MRPL55-232ENST00000495434 TANKQ92844 425 aa13.09□□□□□ -0.31
MRPL55-232ENST00000495434 ATP6V1E2Q96A05 226 aa13.09□□□□□ -0.31
MRPL55-232ENST00000495434 CCDC77Q9BR77 488 aa13.09□□□□□ -0.31
MRPL55-232ENST00000495434 DDX31Q9H8H2 851 aaKnown RBP13.09□□□□□ -0.31
MRPL55-232ENST00000495434 LRFN1Q9P244 771 aa13.09□□□□□ -0.31
MRPL55-232ENST00000495434 PHF11Q9UIL8 331 aa13.09□□□□□ -0.31
MRPL55-232ENST00000495434 SLC5A6Q9Y289 635 aa13.09□□□□□ -0.31
MRPL55-232ENST00000495434 RNF11Q9Y3C5 154 aa13.09□□□□□ -0.31
MRPL55-232ENST00000495434 CLCA3PQ9Y6N3 262 aa13.09□□□□□ -0.31
MRPL55-232ENST00000495434 SAP18O00422 153 aaKnown RBP13.08□□□□□ -0.32
MRPL55-232ENST00000495434 NEURL1O76050 574 aa13.08□□□□□ -0.32
MRPL55-232ENST00000495434 SEMA3DO95025 777 aa13.08□□□□□ -0.32
MRPL55-232ENST00000495434 IFNA16P05015 189 aa13.08□□□□□ -0.32
MRPL55-232ENST00000495434 SP1P08047 785 aa13.08□□□□□ -0.32
MRPL55-232ENST00000495434 RPS17P08708 135 aaKnown RBP13.08□□□□□ -0.32
MRPL55-232ENST00000495434 SBK3P0C264 359 aa13.08□□□□□ -0.32
MRPL55-232ENST00000495434 GP1BBP13224 206 aa13.08□□□□□ -0.32
MRPL55-232ENST00000495434 PPP2R1BP30154 601 aa13.08□□□□□ -0.32
MRPL55-232ENST00000495434 TLX1P31314 330 aaPredicted RBP13.08□□□□□ -0.32
MRPL55-232ENST00000495434 CYB561P49447 251 aa13.08□□□□□ -0.32
MRPL55-232ENST00000495434 IGLV3-21P80748 117 aaPredicted RBP13.08□□□□□ -0.32
MRPL55-232ENST00000495434 TRAF3Q13114 568 aa13.08□□□□□ -0.32
MRPL55-232ENST00000495434 ZRSR2Q15696 482 aaKnown RBP13.08□□□□□ -0.32
MRPL55-232ENST00000495434 MRM1Q6IN84 353 aaKnown RBP13.08□□□□□ -0.32
MRPL55-232ENST00000495434 CLNKQ7Z7G1 428 aa13.08□□□□□ -0.32
MRPL55-232ENST00000495434 GPR180Q86V85 440 aa13.08□□□□□ -0.32
MRPL55-232ENST00000495434 MYRIPQ8NFW9 859 aa13.08□□□□□ -0.32
MRPL55-232ENST00000495434 OR52B6Q8NGF0 335 aa13.08□□□□□ -0.32
MRPL55-232ENST00000495434 NCLNQ969V3 563 aa13.08□□□□□ -0.32
MRPL55-232ENST00000495434 ANKRD9Q96BM1 317 aaPredicted RBP13.08□□□□□ -0.32
MRPL55-232ENST00000495434 C5orf34Q96MH7 638 aa13.08□□□□□ -0.32
MRPL55-232ENST00000495434 SERPINI1Q99574 410 aa13.08□□□□□ -0.32
MRPL55-232ENST00000495434 ZNF717Q9BY31 904 aaPredicted RBP13.08□□□□□ -0.32
MRPL55-232ENST00000495434 EPB41L4BQ9H329 900 aa13.08□□□□□ -0.32
MRPL55-232ENST00000495434 ZBTB26Q9HCK0 441 aa13.08□□□□□ -0.32
MRPL55-232ENST00000495434 PSMC3IPQ9P2W1 217 aaPredicted RBP13.08□□□□□ -0.32
MRPL55-232ENST00000495434 SPTBN1Q01082 2364 aaKnown RBP13.08□□□□□ -0.32
MRPL55-232ENST00000495434 A0A0A6YYD5 115 aa13.07□□□□□ -0.32
MRPL55-232ENST00000495434 TRBV11-1A0A0K0K1C0 115 aa13.07□□□□□ -0.32
MRPL55-232ENST00000495434 ASPDHA6ND91 283 aa13.07□□□□□ -0.32
MRPL55-232ENST00000495434 A8MT66 165 aa13.07□□□□□ -0.32
MRPL55-232ENST00000495434 PROM1O43490 865 aa13.07□□□□□ -0.32
MRPL55-232ENST00000495434 LDB3O75112 727 aa13.07□□□□□ -0.32
MRPL55-232ENST00000495434 SH3BGRLO75368 114 aa13.07□□□□□ -0.32
MRPL55-232ENST00000495434 ZFAND5O76080 213 aa13.07□□□□□ -0.32
MRPL55-232ENST00000495434 OTCP00480 354 aa13.07□□□□□ -0.32
MRPL55-232ENST00000495434 LDLRP01130 860 aa13.07□□□□□ -0.32
MRPL55-232ENST00000495434 GSTA1P08263 222 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms