RNA–Protein interactions for RNA: ENST00000495232.5

CSNK1E-213, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-213ENST00000495232 WBP1Q96G27 269 aa11.37□□□□□ -0.59
CSNK1E-213ENST00000495232 MAPKAP1Q9BPZ7 522 aa11.37□□□□□ -0.59
CSNK1E-213ENST00000495232 ADNPQ9H2P0 1102 aa11.37□□□□□ -0.59
CSNK1E-213ENST00000495232 ZNF160Q9HCG1 818 aa11.37□□□□□ -0.59
CSNK1E-213ENST00000495232 PFDN4Q9NQP4 134 aa11.37□□□□□ -0.59
CSNK1E-213ENST00000495232 RIC8BQ9NVN3 520 aa11.37□□□□□ -0.59
CSNK1E-213ENST00000495232 TRAF6Q9Y4K3 522 aa11.37□□□□□ -0.59
CSNK1E-213ENST00000495232 LOC102723996A0A087X1L8 192 aa11.36□□□□□ -0.59
CSNK1E-213ENST00000495232 IGHV1-45A0A0A0MS14 117 aa11.36□□□□□ -0.59
CSNK1E-213ENST00000495232 A0A0A6YYD5 115 aa11.36□□□□□ -0.59
CSNK1E-213ENST00000495232 SERTM1A2A2V5 107 aa11.36□□□□□ -0.59
CSNK1E-213ENST00000495232 TMEM114B3SHH9 223 aa11.36□□□□□ -0.59
CSNK1E-213ENST00000495232 SLC28A1O00337 649 aa11.36□□□□□ -0.59
CSNK1E-213ENST00000495232 CYR61O00622 381 aa11.36□□□□□ -0.59
CSNK1E-213ENST00000495232 RGS14O43566 566 aa11.36□□□□□ -0.59
CSNK1E-213ENST00000495232 EEDO75530 441 aaKnown RBP11.36□□□□□ -0.59
CSNK1E-213ENST00000495232 MYO1DO94832 1006 aa11.36□□□□□ -0.59
CSNK1E-213ENST00000495232 FGF4P08620 206 aa11.36□□□□□ -0.59
CSNK1E-213ENST00000495232 FAM87AP0C7U9 286 aa11.36□□□□□ -0.59
CSNK1E-213ENST00000495232 DHRS4L1P0CG22 281 aa11.36□□□□□ -0.59
CSNK1E-213ENST00000495232 MAOAP21397 527 aa11.36□□□□□ -0.59
CSNK1E-213ENST00000495232 BGNP21810 368 aa11.36□□□□□ -0.59
CSNK1E-213ENST00000495232 ITGA3P26006 1051 aa11.36□□□□□ -0.59
CSNK1E-213ENST00000495232 PPP2R1BP30154 601 aa11.36□□□□□ -0.59
CSNK1E-213ENST00000495232 MAPK12P53778 367 aa11.36□□□□□ -0.59
CSNK1E-213ENST00000495232 BTG2P78543 158 aa11.36□□□□□ -0.59
CSNK1E-213ENST00000495232 HMGCS1Q01581 520 aa11.36□□□□□ -0.59
CSNK1E-213ENST00000495232 TNFRSF17Q02223 184 aa11.36□□□□□ -0.59
CSNK1E-213ENST00000495232 STX3Q13277 289 aa11.36□□□□□ -0.59
CSNK1E-213ENST00000495232 KCNAB2Q13303 367 aa11.36□□□□□ -0.59
CSNK1E-213ENST00000495232 LINC00303Q3SY05 128 aa11.36□□□□□ -0.59
CSNK1E-213ENST00000495232 LANCL3Q6ZV70 420 aa11.36□□□□□ -0.59
CSNK1E-213ENST00000495232 COMMD6Q7Z4G1 85 aa11.36□□□□□ -0.59
CSNK1E-213ENST00000495232 TRIM42Q8IWZ5 723 aa11.36□□□□□ -0.59
CSNK1E-213ENST00000495232 DDIASQ8IXT1 998 aa11.36□□□□□ -0.59
CSNK1E-213ENST00000495232 KBTBD2Q8IY47 623 aa11.36□□□□□ -0.59
CSNK1E-213ENST00000495232 KIRREL3Q8IZU9 778 aa11.36□□□□□ -0.59
CSNK1E-213ENST00000495232 SHISA5Q8N114 240 aa11.36□□□□□ -0.59
CSNK1E-213ENST00000495232 GALNT16Q8N428 558 aa11.36□□□□□ -0.59
CSNK1E-213ENST00000495232 C1orf52Q8N6N3 182 aaKnown RBP11.36□□□□□ -0.59
CSNK1E-213ENST00000495232 TSLPQ969D9 159 aa11.36□□□□□ -0.59
CSNK1E-213ENST00000495232 CSF3RQ99062 836 aa11.36□□□□□ -0.59
CSNK1E-213ENST00000495232 LPAR4Q99677 370 aa11.36□□□□□ -0.59
CSNK1E-213ENST00000495232 SH3GL2Q99962 352 aa11.36□□□□□ -0.59
CSNK1E-213ENST00000495232 TUBB6Q9BUF5 446 aa11.36□□□□□ -0.59
CSNK1E-213ENST00000495232 SLC25A23Q9BV35 468 aa11.36□□□□□ -0.59
CSNK1E-213ENST00000495232 ZNF717Q9BY31 904 aaPredicted RBP11.36□□□□□ -0.59
CSNK1E-213ENST00000495232 ACPTQ9BZG2 426 aa11.36□□□□□ -0.59
CSNK1E-213ENST00000495232 ZNF700Q9H0M5 742 aa11.36□□□□□ -0.59
CSNK1E-213ENST00000495232 RPF2Q9H7B2 306 aaKnown RBP11.36□□□□□ -0.59
CSNK1E-213ENST00000495232 KCMF1Q9P0J7 381 aa11.36□□□□□ -0.59
CSNK1E-213ENST00000495232 IGHV3-20A0A0C4DH32 117 aa11.35□□□□□ -0.59
CSNK1E-213ENST00000495232 GNG14A0A1W2PPG7 69 aa11.35□□□□□ -0.59
CSNK1E-213ENST00000495232 EIF4E1BA6NMX2 242 aaKnown RBP11.35□□□□□ -0.59
CSNK1E-213ENST00000495232 PROM1O43490 865 aa11.35□□□□□ -0.59
CSNK1E-213ENST00000495232 CTNSO60931 367 aa11.35□□□□□ -0.59
CSNK1E-213ENST00000495232 DNAJB5O75953 348 aa11.35□□□□□ -0.59
CSNK1E-213ENST00000495232 SEC24DO94855 1032 aaPredicted RBP11.35□□□□□ -0.59
CSNK1E-213ENST00000495232 IFNA16P05015 189 aa11.35□□□□□ -0.59
CSNK1E-213ENST00000495232 NR2F6P10588 404 aa11.35□□□□□ -0.59
CSNK1E-213ENST00000495232 COX6A1P12074 109 aa11.35□□□□□ -0.59
CSNK1E-213ENST00000495232 CHN1P15882 459 aa11.35□□□□□ -0.59
CSNK1E-213ENST00000495232 SLC1A6P48664 564 aa11.35□□□□□ -0.59
CSNK1E-213ENST00000495232 HNRNPH2P55795 449 aaKnown RBP11.35□□□□□ -0.59
CSNK1E-213ENST00000495232 ABCE1P61221 599 aaKnown RBP11.35□□□□□ -0.59
CSNK1E-213ENST00000495232 TBL3Q12788 808 aaKnown RBP11.35□□□□□ -0.59
CSNK1E-213ENST00000495232 BIKQ13323 160 aa11.35□□□□□ -0.59
CSNK1E-213ENST00000495232 SERTAD2Q14140 314 aa11.35□□□□□ -0.59
CSNK1E-213ENST00000495232 EXT1Q16394 746 aa11.35□□□□□ -0.59
CSNK1E-213ENST00000495232 SFT2D3Q587I9 215 aa11.35□□□□□ -0.59
CSNK1E-213ENST00000495232 FAM219BQ5XKK7 198 aa11.35□□□□□ -0.59
CSNK1E-213ENST00000495232 KANK2Q63ZY3 851 aa11.35□□□□□ -0.59
CSNK1E-213ENST00000495232 ATG16L1Q676U5 607 aa11.35□□□□□ -0.59
CSNK1E-213ENST00000495232 TRIM46Q7Z4K8 759 aa11.35□□□□□ -0.59
CSNK1E-213ENST00000495232 CLNKQ7Z7G1 428 aa11.35□□□□□ -0.59
CSNK1E-213ENST00000495232 PARP9Q8IXQ6 854 aa11.35□□□□□ -0.59
CSNK1E-213ENST00000495232 LSM14AQ8ND56 463 aaKnown RBP11.35□□□□□ -0.59
CSNK1E-213ENST00000495232 CHTF18Q8WVB6 975 aa11.35□□□□□ -0.59
CSNK1E-213ENST00000495232 TWIST2Q8WVJ9 160 aa11.35□□□□□ -0.59
CSNK1E-213ENST00000495232 TANKQ92844 425 aa11.35□□□□□ -0.59
CSNK1E-213ENST00000495232 CCT7Q99832 543 aa11.35□□□□□ -0.59
CSNK1E-213ENST00000495232 TRIM55Q9BYV6 548 aa11.35□□□□□ -0.59
CSNK1E-213ENST00000495232 ILKAPQ9H0C8 392 aaPredicted RBP11.35□□□□□ -0.59
CSNK1E-213ENST00000495232 TNFRSF12AQ9NP84 129 aa11.35□□□□□ -0.59
CSNK1E-213ENST00000495232 NECTIN3Q9NQS3 549 aa11.35□□□□□ -0.59
CSNK1E-213ENST00000495232 PNO1Q9NRX1 252 aaKnown RBP11.35□□□□□ -0.59
CSNK1E-213ENST00000495232 GPR83Q9NYM4 423 aa11.35□□□□□ -0.59
CSNK1E-213ENST00000495232 TUBD1Q9UJT1 453 aa11.35□□□□□ -0.59
CSNK1E-213ENST00000495232 ATG4BQ9Y4P1 393 aa11.35□□□□□ -0.59
CSNK1E-213ENST00000495232 ASB4Q9Y574 426 aa11.35□□□□□ -0.59
CSNK1E-213ENST00000495232 A0A1W2PQ72 361 aa11.34□□□□□ -0.59
CSNK1E-213ENST00000495232 TCRBV16S1A1N1A0A5B0 115 aa11.34□□□□□ -0.59
CSNK1E-213ENST00000495232 ATXN7O15265 892 aaPredicted RBP11.34□□□□□ -0.59
CSNK1E-213ENST00000495232 TMPRSS11DO60235 418 aa11.34□□□□□ -0.59
CSNK1E-213ENST00000495232 PCDH7O60245 1069 aa11.34□□□□□ -0.59
CSNK1E-213ENST00000495232 SEC22BO75396 215 aa11.34□□□□□ -0.59
CSNK1E-213ENST00000495232 RSL1D1O76021 490 aaKnown RBP11.34□□□□□ -0.59
CSNK1E-213ENST00000495232 ALPPP05187 535 aa11.34□□□□□ -0.59
CSNK1E-213ENST00000495232 LINC00032P0C843 101 aa11.34□□□□□ -0.59
CSNK1E-213ENST00000495232 TNNI3P19429 210 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms