RNA–Protein interactions for RNA: ENST00000494893.5

SNX17-209, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 966 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-209ENST00000494893 SRFBP1Q8NEF9 429 aaKnown RBP16.08■□□□□ 0.16
SNX17-209ENST00000494893 PPP4R1Q8TF05 950 aa16.08■□□□□ 0.16
SNX17-209ENST00000494893 METTL21AQ8WXB1 218 aa16.08■□□□□ 0.16
SNX17-209ENST00000494893 REPS1Q96D71 796 aa16.08■□□□□ 0.16
SNX17-209ENST00000494893 PTCHD1Q96NR3 888 aa16.08■□□□□ 0.16
SNX17-209ENST00000494893 TNFRSF12AQ9NP84 129 aa16.08■□□□□ 0.16
SNX17-209ENST00000494893 SPENQ96T58 3664 aaKnown RBP16.07■□□□□ 0.16
SNX17-209ENST00000494893 ZNF462Q96JM2 2506 aa16.07■□□□□ 0.16
SNX17-209ENST00000494893 A0A088AWK7 358 aa16.07■□□□□ 0.16
SNX17-209ENST00000494893 TCRBV16S1A1N1A0A5B0 115 aa16.07■□□□□ 0.16
SNX17-209ENST00000494893 GMNCA6NCL1 334 aa16.07■□□□□ 0.16
SNX17-209ENST00000494893 TMEM114B3SHH9 223 aa16.07■□□□□ 0.16
SNX17-209ENST00000494893 B8ZZF3 427 aa16.07■□□□□ 0.16
SNX17-209ENST00000494893 PSMD12O00232 456 aaPredicted RBP16.07■□□□□ 0.16
SNX17-209ENST00000494893 PRMT3O60678 531 aa16.07■□□□□ 0.16
SNX17-209ENST00000494893 SNNO75324 88 aaPredicted RBP16.07■□□□□ 0.16
SNX17-209ENST00000494893 PDYNP01213 254 aa16.07■□□□□ 0.16
SNX17-209ENST00000494893 PRR35P0CG20 571 aa16.07■□□□□ 0.16
SNX17-209ENST00000494893 ZNF10P21506 573 aaPredicted RBP16.07■□□□□ 0.16
SNX17-209ENST00000494893 JAK1P23458 1154 aa16.07■□□□□ 0.16
SNX17-209ENST00000494893 SSR2P43308 183 aa16.07■□□□□ 0.16
SNX17-209ENST00000494893 CD97P48960 835 aa16.07■□□□□ 0.16
SNX17-209ENST00000494893 PGDP52209 483 aa16.07■□□□□ 0.16
SNX17-209ENST00000494893 TGM3Q08188 693 aa16.07■□□□□ 0.16
SNX17-209ENST00000494893 LCP2Q13094 533 aa16.07■□□□□ 0.16
SNX17-209ENST00000494893 AP5B1Q2VPB7 878 aa16.07■□□□□ 0.16
SNX17-209ENST00000494893 SFT2D3Q587I9 215 aa16.07■□□□□ 0.16
SNX17-209ENST00000494893 SGO1Q5FBB7 561 aa16.07■□□□□ 0.16
SNX17-209ENST00000494893 VWA5B1Q5TIE3 1220 aa16.07■□□□□ 0.16
SNX17-209ENST00000494893 MRM1Q6IN84 353 aaKnown RBP16.07■□□□□ 0.16
SNX17-209ENST00000494893 GPRIN3Q6ZVF9 776 aa16.07■□□□□ 0.16
SNX17-209ENST00000494893 CCNYL1Q8N7R7 359 aa16.07■□□□□ 0.16
SNX17-209ENST00000494893 CDYL2Q8N8U2 506 aa16.07■□□□□ 0.16
SNX17-209ENST00000494893 AGAP11Q8TF27 550 aa16.07■□□□□ 0.16
SNX17-209ENST00000494893 RGMAQ96B86 450 aa16.07■□□□□ 0.16
SNX17-209ENST00000494893 CHMP6Q96FZ7 201 aa16.07■□□□□ 0.16
SNX17-209ENST00000494893 THOC3Q96J01 351 aaKnown RBP16.07■□□□□ 0.16
SNX17-209ENST00000494893 CNDP1Q96KN2 507 aa16.07■□□□□ 0.16
SNX17-209ENST00000494893 KCNA7Q96RP8 456 aa16.07■□□□□ 0.16
SNX17-209ENST00000494893 HBEGFQ99075 208 aa16.07■□□□□ 0.16
SNX17-209ENST00000494893 ROGDIQ9GZN7 287 aa16.07■□□□□ 0.16
SNX17-209ENST00000494893 COPS7BQ9H9Q2 264 aaPredicted RBP16.07■□□□□ 0.16
SNX17-209ENST00000494893 LYRM4Q9HD34 91 aa16.07■□□□□ 0.16
SNX17-209ENST00000494893 PRDM9Q9NQV7 894 aa16.07■□□□□ 0.16
SNX17-209ENST00000494893 RIC8BQ9NVN3 520 aa16.07■□□□□ 0.16
SNX17-209ENST00000494893 COL6A6A6NMZ7 2263 aa16.07■□□□□ 0.16
SNX17-209ENST00000494893 A0A0A6YYD5 115 aa16.06■□□□□ 0.16
SNX17-209ENST00000494893 MANBAO00462 879 aa16.06■□□□□ 0.16
SNX17-209ENST00000494893 TMPRSS11DO60235 418 aa16.06■□□□□ 0.16
SNX17-209ENST00000494893 NPHS1O60500 1241 aa16.06■□□□□ 0.16
SNX17-209ENST00000494893 SERPINA7P05543 415 aa16.06■□□□□ 0.16
SNX17-209ENST00000494893 VIMP08670 466 aaKnown RBP16.06■□□□□ 0.16
SNX17-209ENST00000494893 ITGAMP11215 1152 aa16.06■□□□□ 0.16
SNX17-209ENST00000494893 SERPINB5P36952 375 aa16.06■□□□□ 0.16
SNX17-209ENST00000494893 SLC1A6P48664 564 aa16.06■□□□□ 0.16
SNX17-209ENST00000494893 ARFIP1P53367 373 aa16.06■□□□□ 0.16
SNX17-209ENST00000494893 SEC24CP53992 1094 aa16.06■□□□□ 0.16
SNX17-209ENST00000494893 FOXA1P55317 472 aa16.06■□□□□ 0.16
SNX17-209ENST00000494893 HNRNPH2P55795 449 aaKnown RBP16.06■□□□□ 0.16
SNX17-209ENST00000494893 ABCE1P61221 599 aaKnown RBP16.06■□□□□ 0.16
SNX17-209ENST00000494893 NAA20P61599 178 aa16.06■□□□□ 0.16
SNX17-209ENST00000494893 CFAP157Q5JU67 520 aa16.06■□□□□ 0.16
SNX17-209ENST00000494893 PAPD4Q6PIY7 484 aaKnown RBP16.06■□□□□ 0.16
SNX17-209ENST00000494893 FRMD7Q6ZUT3 714 aa16.06■□□□□ 0.16
SNX17-209ENST00000494893 ZCCHC7Q8N3Z6 543 aaKnown RBP16.06■□□□□ 0.16
SNX17-209ENST00000494893 VPS50Q96JG6 964 aa16.06■□□□□ 0.16
SNX17-209ENST00000494893 SERPINI1Q99574 410 aa16.06■□□□□ 0.16
SNX17-209ENST00000494893 TUBB6Q9BUF5 446 aa16.06■□□□□ 0.16
SNX17-209ENST00000494893 LHPPQ9H008 270 aa16.06■□□□□ 0.16
SNX17-209ENST00000494893 DDX31Q9H8H2 851 aaKnown RBP16.06■□□□□ 0.16
SNX17-209ENST00000494893 THAP1Q9NVV9 213 aa16.06■□□□□ 0.16
SNX17-209ENST00000494893 C19orf25Q9UFG5 118 aaPredicted RBP16.06■□□□□ 0.16
SNX17-209ENST00000494893 MMACHCQ9Y4U1 282 aa16.06■□□□□ 0.16
SNX17-209ENST00000494893 PCDHGB7Q9Y5F8 929 aa16.06■□□□□ 0.16
SNX17-209ENST00000494893 SUV39H1O43463 412 aa16.05■□□□□ 0.16
SNX17-209ENST00000494893 ITM2AO43736 263 aa16.05■□□□□ 0.16
SNX17-209ENST00000494893 SEMA3DO95025 777 aa16.05■□□□□ 0.16
SNX17-209ENST00000494893 ESRRBO95718 433 aa16.05■□□□□ 0.16
SNX17-209ENST00000494893 MLYCDO95822 493 aa16.05■□□□□ 0.16
SNX17-209ENST00000494893 PPP2R1BP30154 601 aa16.05■□□□□ 0.16
SNX17-209ENST00000494893 SOX11P35716 441 aa16.05■□□□□ 0.16
SNX17-209ENST00000494893 TSFMP43897 325 aaKnown RBP16.05■□□□□ 0.16
SNX17-209ENST00000494893 RAP1GDS1P52306 607 aa16.05■□□□□ 0.16
SNX17-209ENST00000494893 PKNOX1P55347 436 aa16.05■□□□□ 0.16
SNX17-209ENST00000494893 OR4D2P58180 307 aa16.05■□□□□ 0.16
SNX17-209ENST00000494893 PHEXP78562 749 aa16.05■□□□□ 0.16
SNX17-209ENST00000494893 OCRLQ01968 901 aa16.05■□□□□ 0.16
SNX17-209ENST00000494893 C19orf57Q0VDD7 668 aa16.05■□□□□ 0.16
SNX17-209ENST00000494893 IFT88Q13099 833 aa16.05■□□□□ 0.16
SNX17-209ENST00000494893 SLAMF1Q13291 335 aa16.05■□□□□ 0.16
SNX17-209ENST00000494893 RCN2Q14257 317 aa16.05■□□□□ 0.16
SNX17-209ENST00000494893 NADK2Q4G0N4 442 aa16.05■□□□□ 0.16
SNX17-209ENST00000494893 PLAG1Q6DJT9 500 aa16.05■□□□□ 0.16
SNX17-209ENST00000494893 KBTBD2Q8IY47 623 aa16.05■□□□□ 0.16
SNX17-209ENST00000494893 ZNF595Q8IYB9 648 aa16.05■□□□□ 0.16
SNX17-209ENST00000494893 LRRC34Q8IZ02 419 aa16.05■□□□□ 0.16
SNX17-209ENST00000494893 RBMXL3Q8N7X1 1067 aaKnown RBP16.05■□□□□ 0.16
SNX17-209ENST00000494893 BRIX1Q8TDN6 353 aaKnown RBP16.05■□□□□ 0.16
SNX17-209ENST00000494893 ADAMTS18Q8TE60 1221 aa16.05■□□□□ 0.16
SNX17-209ENST00000494893 SELENOMQ8WWX9 145 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms