RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 PYROXD1Q8WU10 500 aa21.57■■□□□ 1.04
COL27A1-208ENST00000494780 RND1Q92730 232 aa21.57■■□□□ 1.04
COL27A1-208ENST00000494780 CDKL2Q92772 493 aa21.57■■□□□ 1.04
COL27A1-208ENST00000494780 KCNC2Q96PR1 638 aa21.57■■□□□ 1.04
COL27A1-208ENST00000494780 F2RL3Q96RI0 385 aa21.57■■□□□ 1.04
COL27A1-208ENST00000494780 ALOXE3Q9BYJ1 711 aa21.57■■□□□ 1.04
COL27A1-208ENST00000494780 KCNF1Q9H3M0 494 aa21.57■■□□□ 1.04
COL27A1-208ENST00000494780 LYRM4Q9HD34 91 aa21.57■■□□□ 1.04
COL27A1-208ENST00000494780 TXNDC16Q9P2K2 825 aa21.57■■□□□ 1.04
COL27A1-208ENST00000494780 SNX24Q9Y343 169 aa21.57■■□□□ 1.04
COL27A1-208ENST00000494780 SAR1BQ9Y6B6 198 aa21.57■■□□□ 1.04
COL27A1-208ENST00000494780 PINLYPA6NC86 204 aa21.56■■□□□ 1.04
COL27A1-208ENST00000494780 WWP2O00308 870 aa21.56■■□□□ 1.04
COL27A1-208ENST00000494780 PHGDHO43175 533 aaKnown RBP21.56■■□□□ 1.04
COL27A1-208ENST00000494780 PIAS1O75925 651 aa21.56■■□□□ 1.04
COL27A1-208ENST00000494780 CD22P20273 847 aa21.56■■□□□ 1.04
COL27A1-208ENST00000494780 PAFAH1B1P43034 410 aa21.56■■□□□ 1.04
COL27A1-208ENST00000494780 HK2P52789 917 aa21.56■■□□□ 1.04
COL27A1-208ENST00000494780 SERTAD2Q14140 314 aa21.56■■□□□ 1.04
COL27A1-208ENST00000494780 FBXO48Q5FWF7 155 aa21.56■■□□□ 1.04
COL27A1-208ENST00000494780 CAPN12Q6ZSI9 719 aa21.56■■□□□ 1.04
COL27A1-208ENST00000494780 PDPRQ8NCN5 879 aa21.56■■□□□ 1.04
COL27A1-208ENST00000494780 ESAMQ96AP7 390 aa21.56■■□□□ 1.04
COL27A1-208ENST00000494780 TBCDQ9BTW9 1192 aa21.56■■□□□ 1.04
COL27A1-208ENST00000494780 ZDHHC11Q9H8X9 412 aa21.56■■□□□ 1.04
COL27A1-208ENST00000494780 CD274Q9NZQ7 290 aa21.56■■□□□ 1.04
COL27A1-208ENST00000494780 PTBP2Q9UKA9 531 aaKnown RBP21.56■■□□□ 1.04
COL27A1-208ENST00000494780 RNF6Q9Y252 685 aa21.56■■□□□ 1.04
COL27A1-208ENST00000494780 TACC2O95359 2948 aa21.56■■□□□ 1.04
COL27A1-208ENST00000494780 STMN1P16949 149 aa21.55■■□□□ 1.04
COL27A1-208ENST00000494780 IGFBP2P18065 325 aa21.55■■□□□ 1.04
COL27A1-208ENST00000494780 TNNI3P19429 210 aa21.55■■□□□ 1.04
COL27A1-208ENST00000494780 RIPPLY3P57055 190 aa21.55■■□□□ 1.04
COL27A1-208ENST00000494780 GNG11P61952 73 aa21.55■■□□□ 1.04
COL27A1-208ENST00000494780 OR4D1Q15615 310 aa21.55■■□□□ 1.04
COL27A1-208ENST00000494780 TBCCQ15814 346 aa21.55■■□□□ 1.04
COL27A1-208ENST00000494780 EMC4Q5J8M3 183 aa21.55■■□□□ 1.04
COL27A1-208ENST00000494780 NDUFAF5Q5TEU4 345 aa21.55■■□□□ 1.04
COL27A1-208ENST00000494780 RTL4Q6ZR62 310 aa21.55■■□□□ 1.04
COL27A1-208ENST00000494780 GK5Q6ZS86 529 aa21.55■■□□□ 1.04
COL27A1-208ENST00000494780 CDH24Q86UP0 819 aa21.55■■□□□ 1.04
COL27A1-208ENST00000494780 SLC22A16Q86VW1 577 aa21.55■■□□□ 1.04
COL27A1-208ENST00000494780 C7orf57Q8NEG2 295 aa21.55■■□□□ 1.04
COL27A1-208ENST00000494780 OR5L2Q8NGL0 311 aa21.55■■□□□ 1.04
COL27A1-208ENST00000494780 GPR22Q99680 433 aa21.55■■□□□ 1.04
COL27A1-208ENST00000494780 RBBP8Q99708 897 aa21.55■■□□□ 1.04
COL27A1-208ENST00000494780 NAPGQ99747 312 aaPredicted RBP21.55■■□□□ 1.04
COL27A1-208ENST00000494780 CPNE1Q99829 537 aa21.55■■□□□ 1.04
COL27A1-208ENST00000494780 TTTY12Q9BZ98 90 aa21.55■■□□□ 1.04
COL27A1-208ENST00000494780 OR8D2Q9GZM6 311 aa21.55■■□□□ 1.04
COL27A1-208ENST00000494780 ANKRD17O75179 2603 aaKnown RBP21.55■■□□□ 1.04
COL27A1-208ENST00000494780 MYOCOSA0A1B0GUC4 107 aa21.54■■□□□ 1.04
COL27A1-208ENST00000494780 FAM166BA8MTA8 275 aa21.54■■□□□ 1.04
COL27A1-208ENST00000494780 CXorf49A8MYA2 514 aaPredicted RBP21.54■■□□□ 1.04
COL27A1-208ENST00000494780 S100BP04271 92 aaPredicted RBP21.54■■□□□ 1.04
COL27A1-208ENST00000494780 CNR1P21554 472 aa21.54■■□□□ 1.04
COL27A1-208ENST00000494780 SSTR1P30872 391 aa21.54■■□□□ 1.04
COL27A1-208ENST00000494780 CASP2P42575 452 aa21.54■■□□□ 1.04
COL27A1-208ENST00000494780 RNF4P78317 190 aa21.54■■□□□ 1.04
COL27A1-208ENST00000494780 IRF8Q02556 426 aa21.54■■□□□ 1.04
COL27A1-208ENST00000494780 CHIT1Q13231 466 aa21.54■■□□□ 1.04
COL27A1-208ENST00000494780 E2F2Q14209 437 aa21.54■■□□□ 1.04
COL27A1-208ENST00000494780 ACAD11Q709F0 780 aa21.54■■□□□ 1.04
COL27A1-208ENST00000494780 CYS1Q717R9 158 aa21.54■■□□□ 1.04
COL27A1-208ENST00000494780 UBE3DQ7Z6J8 389 aa21.54■■□□□ 1.04
COL27A1-208ENST00000494780 GOLM1Q8NBJ4 401 aa21.54■■□□□ 1.04
COL27A1-208ENST00000494780 SGCZQ96LD1 299 aa21.54■■□□□ 1.04
COL27A1-208ENST00000494780 UBXN10Q96LJ8 280 aa21.54■■□□□ 1.04
COL27A1-208ENST00000494780 FAM173AQ9BQD7 235 aa21.54■■□□□ 1.04
COL27A1-208ENST00000494780 MS4A8Q9BY19 250 aa21.54■■□□□ 1.04
COL27A1-208ENST00000494780 CD244Q9BZW8 370 aa21.54■■□□□ 1.04
COL27A1-208ENST00000494780 RNF14Q9UBS8 474 aa21.54■■□□□ 1.04
COL27A1-208ENST00000494780 SPACA6W5XKT8 324 aa21.54■■□□□ 1.04
COL27A1-208ENST00000494780 A0A0G2JMM0 328 aa21.53■■□□□ 1.04
COL27A1-208ENST00000494780 A0A1W2PPB8 328 aa21.53■■□□□ 1.04
COL27A1-208ENST00000494780 A0A1W2PRS3 328 aa21.53■■□□□ 1.04
COL27A1-208ENST00000494780 KIR3DP1A8MWS1 328 aa21.53■■□□□ 1.04
COL27A1-208ENST00000494780 FOXO6A8MYZ6 492 aa21.53■■□□□ 1.04
COL27A1-208ENST00000494780 C17orf105B2RV13 164 aa21.53■■□□□ 1.04
COL27A1-208ENST00000494780 EIF3HO15372 352 aaKnown RBP eCLIP21.53■■□□□ 1.043e-39■■■□□ 17.8
COL27A1-208ENST00000494780 CCNT2O60583 730 aaKnown RBP21.53■■□□□ 1.04
COL27A1-208ENST00000494780 GLSO94925 669 aaPredicted RBP21.53■■□□□ 1.04
COL27A1-208ENST00000494780 EPORP19235 508 aa21.53■■□□□ 1.04
COL27A1-208ENST00000494780 ATP5A1P25705 553 aaKnown RBP21.53■■□□□ 1.04
COL27A1-208ENST00000494780 MSH2P43246 934 aa21.53■■□□□ 1.04
COL27A1-208ENST00000494780 NR0B1P51843 470 aaKnown RBP21.53■■□□□ 1.04
COL27A1-208ENST00000494780 ZKSCAN8Q15776 578 aaPredicted RBP21.53■■□□□ 1.04
COL27A1-208ENST00000494780 ZNF750Q32MQ0 723 aa21.53■■□□□ 1.04
COL27A1-208ENST00000494780 GXYLT1Q4G148 440 aa21.53■■□□□ 1.04
COL27A1-208ENST00000494780 TMEM35AQ53FP2 167 aa21.53■■□□□ 1.04
COL27A1-208ENST00000494780 OPN5Q6U736 354 aa21.53■■□□□ 1.04
COL27A1-208ENST00000494780 ZNF793Q6ZN11 406 aa21.53■■□□□ 1.04
COL27A1-208ENST00000494780 LRRC70Q7Z2Q7 622 aa21.53■■□□□ 1.04
COL27A1-208ENST00000494780 RPRMLQ8N4K4 120 aa21.53■■□□□ 1.04
COL27A1-208ENST00000494780 ZNF321PQ8N8H1 164 aa21.53■■□□□ 1.04
COL27A1-208ENST00000494780 ACOT4Q8N9L9 421 aa21.53■■□□□ 1.04
COL27A1-208ENST00000494780 SLC2A12Q8TD20 617 aa21.53■■□□□ 1.04
COL27A1-208ENST00000494780 ZNF473Q8WTR7 871 aaKnown RBP21.53■■□□□ 1.04
COL27A1-208ENST00000494780 UBE2E3Q969T4 207 aa21.53■■□□□ 1.04
COL27A1-208ENST00000494780 SCYL1Q96KG9 808 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms