RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 VASPP50552 380 aaPredicted RBP4.59□□□□□ -1.67
PRKD3-210ENST00000494667 ZNF81P51508 661 aa4.59□□□□□ -1.67
PRKD3-210ENST00000494667 PGGT1BP53609 377 aa4.59□□□□□ -1.67
PRKD3-210ENST00000494667 PRMT2P55345 433 aa4.59□□□□□ -1.67
PRKD3-210ENST00000494667 ZP1P60852 638 aa4.59□□□□□ -1.67
PRKD3-210ENST00000494667 AP1S1P61966 158 aa4.59□□□□□ -1.67
PRKD3-210ENST00000494667 E2F1Q01094 437 aa4.59□□□□□ -1.67
PRKD3-210ENST00000494667 DYRK1AQ13627 763 aa4.59□□□□□ -1.67
PRKD3-210ENST00000494667 BAATQ14032 418 aaPredicted RBP4.59□□□□□ -1.67
PRKD3-210ENST00000494667 VMACQ2NL98 169 aa4.59□□□□□ -1.67
PRKD3-210ENST00000494667 ZNF789Q5FWF6 425 aa4.59□□□□□ -1.67
PRKD3-210ENST00000494667 FAM160B1Q5W0V3 765 aa4.59□□□□□ -1.67
PRKD3-210ENST00000494667 MICALL2Q8IY33 904 aa4.59□□□□□ -1.67
PRKD3-210ENST00000494667 FBXO39Q8N4B4 442 aa4.59□□□□□ -1.67
PRKD3-210ENST00000494667 GLYATL2Q8WU03 294 aa4.59□□□□□ -1.67
PRKD3-210ENST00000494667 ST8SIA2Q92186 375 aa4.59□□□□□ -1.67
PRKD3-210ENST00000494667 PHF21AQ96BD5 680 aa4.59□□□□□ -1.67
PRKD3-210ENST00000494667 MTERF3Q96E29 417 aa4.59□□□□□ -1.67
PRKD3-210ENST00000494667 MYO19Q96H55 970 aa4.59□□□□□ -1.67
PRKD3-210ENST00000494667 TMEM41AQ96HV5 264 aa4.59□□□□□ -1.67
PRKD3-210ENST00000494667 C8orf37Q96NL8 207 aa4.59□□□□□ -1.67
PRKD3-210ENST00000494667 TRIB3Q96RU7 358 aa4.59□□□□□ -1.67
PRKD3-210ENST00000494667 PIP5K1AQ99755 562 aa4.59□□□□□ -1.67
PRKD3-210ENST00000494667 GSDMCQ9BYG8 508 aa4.59□□□□□ -1.67
PRKD3-210ENST00000494667 DPAGT1Q9H3H5 408 aa4.59□□□□□ -1.67
PRKD3-210ENST00000494667 JPH1Q9HDC5 661 aaPredicted RBP4.59□□□□□ -1.67
PRKD3-210ENST00000494667 FGF20Q9NP95 211 aaPredicted RBP4.59□□□□□ -1.67
PRKD3-210ENST00000494667 C11orf16Q9NQ32 467 aa4.59□□□□□ -1.67
PRKD3-210ENST00000494667 NANSQ9NR45 359 aa4.59□□□□□ -1.67
PRKD3-210ENST00000494667 KLHL1Q9NR64 748 aa4.59□□□□□ -1.67
PRKD3-210ENST00000494667 RAD18Q9NS91 495 aa4.59□□□□□ -1.67
PRKD3-210ENST00000494667 SNTG1Q9NSN8 517 aa4.59□□□□□ -1.67
PRKD3-210ENST00000494667 CLN6Q9NWW5 311 aa4.59□□□□□ -1.67
PRKD3-210ENST00000494667 MS4A12Q9NXJ0 267 aa4.59□□□□□ -1.67
PRKD3-210ENST00000494667 MYEF2Q9P2K5 600 aaKnown RBP4.59□□□□□ -1.67
PRKD3-210ENST00000494667 TESQ9UGI8 421 aaKnown RBP4.59□□□□□ -1.67
PRKD3-210ENST00000494667 FZD1Q9UP38 647 aa4.59□□□□□ -1.67
PRKD3-210ENST00000494667 CARHSP1Q9Y2V2 147 aaKnown RBP4.59□□□□□ -1.67
PRKD3-210ENST00000494667 J3KR12 359 aa4.59□□□□□ -1.67
PRKD3-210ENST00000494667 MT-CO1P00395 513 aa4.59□□□□□ -1.67
PRKD3-210ENST00000494667 AHCYP23526 432 aa4.59□□□□□ -1.67
PRKD3-210ENST00000494667 APEX1P27695 318 aaKnown RBP4.59□□□□□ -1.67
PRKD3-210ENST00000494667 LCN1P31025 176 aa4.59□□□□□ -1.67
PRKD3-210ENST00000494667 PLK1P53350 603 aa4.59□□□□□ -1.67
PRKD3-210ENST00000494667 GAS1P54826 345 aa4.59□□□□□ -1.67
PRKD3-210ENST00000494667 CDC42P60953 191 aa4.59□□□□□ -1.67
PRKD3-210ENST00000494667 RAB4BP61018 213 aa4.59□□□□□ -1.67
PRKD3-210ENST00000494667 C2orf80Q0P641 193 aa4.59□□□□□ -1.67
PRKD3-210ENST00000494667 HNRNPA0Q13151 305 aaKnown RBP4.59□□□□□ -1.67
PRKD3-210ENST00000494667 GPR17Q13304 367 aa4.59□□□□□ -1.67
PRKD3-210ENST00000494667 CDKL4Q5MAI5 379 aa4.59□□□□□ -1.67
PRKD3-210ENST00000494667 ELFN2Q5R3F8 820 aa4.59□□□□□ -1.67
PRKD3-210ENST00000494667 DCAF8Q5TAQ9 597 aa4.59□□□□□ -1.67
PRKD3-210ENST00000494667 SYPL2Q5VXT5 272 aa4.59□□□□□ -1.67
PRKD3-210ENST00000494667 ZNF551Q7Z340 670 aaPredicted RBP4.59□□□□□ -1.67
PRKD3-210ENST00000494667 DNAJB7Q7Z6W7 309 aaPredicted RBP4.59□□□□□ -1.67
PRKD3-210ENST00000494667 CPXM2Q8N436 756 aa4.59□□□□□ -1.67
PRKD3-210ENST00000494667 LINC00116Q8NCU8 138 aa4.59□□□□□ -1.67
PRKD3-210ENST00000494667 TRPV1Q8NER1 839 aa4.59□□□□□ -1.67
PRKD3-210ENST00000494667 HAVCR2Q8TDQ0 301 aa4.59□□□□□ -1.67
PRKD3-210ENST00000494667 WNT8BQ93098 351 aa4.59□□□□□ -1.67
PRKD3-210ENST00000494667 TCEAL3Q969E4 200 aa4.59□□□□□ -1.67
PRKD3-210ENST00000494667 MAGEB5Q9BZ81 275 aa4.59□□□□□ -1.67
PRKD3-210ENST00000494667 C11orf49Q9H6J7 331 aa4.59□□□□□ -1.67
PRKD3-210ENST00000494667 TMLHEQ9NVH6 421 aa4.59□□□□□ -1.67
PRKD3-210ENST00000494667 RBM22Q9NW64 420 aaKnown RBP eCLIP4.59□□□□□ -1.67
PRKD3-210ENST00000494667 NUDT4Q9NZJ9 180 aa4.59□□□□□ -1.67
PRKD3-210ENST00000494667 POLLQ9UGP5 575 aa4.59□□□□□ -1.67
PRKD3-210ENST00000494667 SLC2A6Q9UGQ3 507 aa4.59□□□□□ -1.67
PRKD3-210ENST00000494667 CA5BQ9Y2D0 317 aa4.59□□□□□ -1.67
PRKD3-210ENST00000494667 PCDHGA9Q9Y5G4 932 aaKnown RBP4.59□□□□□ -1.67
PRKD3-210ENST00000494667 LOC390937A0A1W2PQ73 354 aa4.59□□□□□ -1.68
PRKD3-210ENST00000494667 RAB19A4D1S5 217 aa4.59□□□□□ -1.68
PRKD3-210ENST00000494667 EFCAB7A8K855 629 aa4.59□□□□□ -1.68
PRKD3-210ENST00000494667 NUDT19A8MXV4 375 aa4.59□□□□□ -1.68
PRKD3-210ENST00000494667 KCNK1O00180 336 aa4.59□□□□□ -1.68
PRKD3-210ENST00000494667 HAS3O00219 553 aa4.59□□□□□ -1.68
PRKD3-210ENST00000494667 MATN3O15232 486 aa4.59□□□□□ -1.68
PRKD3-210ENST00000494667 PRMT3O60678 531 aa4.59□□□□□ -1.68
PRKD3-210ENST00000494667 RGS20O76081 388 aa4.59□□□□□ -1.68
PRKD3-210ENST00000494667 CDRT1O95170 752 aa4.59□□□□□ -1.68
PRKD3-210ENST00000494667 VIPP01282 170 aa4.59□□□□□ -1.68
PRKD3-210ENST00000494667 EIF2S3P41091 472 aaKnown RBP4.59□□□□□ -1.68
PRKD3-210ENST00000494667 ATXN1P54253 815 aaKnown RBP4.59□□□□□ -1.68
PRKD3-210ENST00000494667 RPS7P62081 194 aaKnown RBP4.59□□□□□ -1.68
PRKD3-210ENST00000494667 EFNB1P98172 346 aa4.59□□□□□ -1.68
PRKD3-210ENST00000494667 ALDH6A1Q02252 535 aaKnown RBP4.59□□□□□ -1.68
PRKD3-210ENST00000494667 NRG1Q02297 640 aaPredicted RBP4.59□□□□□ -1.68
PRKD3-210ENST00000494667 ILKQ13418 452 aa4.59□□□□□ -1.68
PRKD3-210ENST00000494667 CDNFQ49AH0 187 aa4.59□□□□□ -1.68
PRKD3-210ENST00000494667 SYTL3Q4VX76 610 aa4.59□□□□□ -1.68
PRKD3-210ENST00000494667 USP39Q53GS9 565 aaKnown RBP4.59□□□□□ -1.68
PRKD3-210ENST00000494667 HECTD3Q5T447 861 aa4.59□□□□□ -1.68
PRKD3-210ENST00000494667 ZNF770Q6IQ21 691 aaPredicted RBP4.59□□□□□ -1.68
PRKD3-210ENST00000494667 KIAA1211LQ6NV74 962 aa4.59□□□□□ -1.68
PRKD3-210ENST00000494667 BAIAP2L2Q6UXY1 529 aa4.59□□□□□ -1.68
PRKD3-210ENST00000494667 LHFPL3Q86UP9 236 aa4.59□□□□□ -1.68
PRKD3-210ENST00000494667 PTOV1Q86YD1 416 aa4.59□□□□□ -1.68
PRKD3-210ENST00000494667 LRRC56Q8IYG6 542 aaPredicted RBP4.59□□□□□ -1.68
PRKD3-210ENST00000494667 FAM98AQ8NCA5 519 aaKnown RBP4.59□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms