RNA–Protein interactions for RNA: ENST00000494613.5

LIMS2-216, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 1,137 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-216ENST00000494613 LDB3O75112 727 aa14.55□□□□□ -0.08
LIMS2-216ENST00000494613 KRT38O76015 456 aa14.55□□□□□ -0.08
LIMS2-216ENST00000494613 UNC5CO95185 931 aa14.55□□□□□ -0.08
LIMS2-216ENST00000494613 COL6A2P12110 1019 aa14.55□□□□□ -0.08
LIMS2-216ENST00000494613 TRHRP34981 398 aaPredicted RBP14.55□□□□□ -0.08
LIMS2-216ENST00000494613 MAGEA12P43365 314 aa14.55□□□□□ -0.08
LIMS2-216ENST00000494613 HLCSP50747 726 aa14.55□□□□□ -0.08
LIMS2-216ENST00000494613 STX4Q12846 297 aa14.55□□□□□ -0.08
LIMS2-216ENST00000494613 DDX39BQ13838 428 aaKnown RBP14.55□□□□□ -0.08
LIMS2-216ENST00000494613 CPSF6Q16630 551 aaKnown RBP eCLIP14.55□□□□□ -0.08
LIMS2-216ENST00000494613 TECRLQ5HYJ1 363 aa14.55□□□□□ -0.08
LIMS2-216ENST00000494613 METTL2BQ6P1Q9 378 aaKnown RBP14.55□□□□□ -0.08
LIMS2-216ENST00000494613 GALNTL5Q7Z4T8 443 aa14.55□□□□□ -0.08
LIMS2-216ENST00000494613 GOLGA7Q7Z5G4 137 aa14.55□□□□□ -0.08
LIMS2-216ENST00000494613 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.55□□□□□ -0.08
LIMS2-216ENST00000494613 MYLK4Q86YV6 388 aaPredicted RBP14.55□□□□□ -0.08
LIMS2-216ENST00000494613 TMEM132CQ8N3T6 1108 aa14.55□□□□□ -0.08
LIMS2-216ENST00000494613 TMEM178AQ8NBL3 297 aa14.55□□□□□ -0.08
LIMS2-216ENST00000494613 PTPMT1Q8WUK0 201 aaPredicted RBP14.55□□□□□ -0.08
LIMS2-216ENST00000494613 NCLNQ969V3 563 aa14.55□□□□□ -0.08
LIMS2-216ENST00000494613 RELTQ969Z4 430 aa14.55□□□□□ -0.08
LIMS2-216ENST00000494613 ISL2Q96A47 359 aa14.55□□□□□ -0.08
LIMS2-216ENST00000494613 ANKRD9Q96BM1 317 aaPredicted RBP14.55□□□□□ -0.08
LIMS2-216ENST00000494613 PHF21BQ96EK2 531 aa14.55□□□□□ -0.08
LIMS2-216ENST00000494613 SORBS1Q9BX66 1292 aaKnown RBP14.55□□□□□ -0.08
LIMS2-216ENST00000494613 LIN28AQ9H9Z2 209 aaKnown RBP14.55□□□□□ -0.08
LIMS2-216ENST00000494613 ADAP2Q9NPF8 381 aa14.55□□□□□ -0.08
LIMS2-216ENST00000494613 ZNF180Q9UJW8 692 aa14.55□□□□□ -0.08
LIMS2-216ENST00000494613 ZNF223Q9UK11 482 aaPredicted RBP14.55□□□□□ -0.08
LIMS2-216ENST00000494613 NFU1Q9UMS0 254 aa14.55□□□□□ -0.08
LIMS2-216ENST00000494613 CLCA3PQ9Y6N3 262 aa14.55□□□□□ -0.08
LIMS2-216ENST00000494613 A0A087WUV0 522 aaPredicted RBP14.54□□□□□ -0.08
LIMS2-216ENST00000494613 ASPDHA6ND91 283 aa14.54□□□□□ -0.08
LIMS2-216ENST00000494613 TRIM49D1C9J1S8 452 aa14.54□□□□□ -0.08
LIMS2-216ENST00000494613 H0YIV9 168 aa14.54□□□□□ -0.08
LIMS2-216ENST00000494613 FCHO1O14526 889 aa14.54□□□□□ -0.08
LIMS2-216ENST00000494613 PRKNO60260 465 aaPredicted RBP14.54□□□□□ -0.08
LIMS2-216ENST00000494613 UGDHO60701 494 aa14.54□□□□□ -0.08
LIMS2-216ENST00000494613 ZFAND5O76080 213 aa14.54□□□□□ -0.08
LIMS2-216ENST00000494613 SCELO95171 688 aa14.54□□□□□ -0.08
LIMS2-216ENST00000494613 TNNI3P19429 210 aa14.54□□□□□ -0.08
LIMS2-216ENST00000494613 CPN2P22792 545 aa14.54□□□□□ -0.08
LIMS2-216ENST00000494613 CNTFP26441 200 aa14.54□□□□□ -0.08
LIMS2-216ENST00000494613 COL8A1P27658 744 aa14.54□□□□□ -0.08
LIMS2-216ENST00000494613 NEK2P51955 445 aa14.54□□□□□ -0.08
LIMS2-216ENST00000494613 RPS13P62277 151 aaKnown RBP14.54□□□□□ -0.08
LIMS2-216ENST00000494613 ELAVL1Q15717 326 aaKnown RBP14.54□□□□□ -0.08
LIMS2-216ENST00000494613 KRTCAP3Q53RY4 240 aa14.54□□□□□ -0.08
LIMS2-216ENST00000494613 C1QL3Q5VWW1 255 aa14.54□□□□□ -0.08
LIMS2-216ENST00000494613 MAMDC2Q7Z304 686 aaPredicted RBP14.54□□□□□ -0.08
LIMS2-216ENST00000494613 FJX1Q86VR8 437 aa14.54□□□□□ -0.08
LIMS2-216ENST00000494613 CEP112Q8N8E3 955 aa14.54□□□□□ -0.08
LIMS2-216ENST00000494613 L3MBTL4Q8NA19 623 aa14.54□□□□□ -0.08
LIMS2-216ENST00000494613 MTFMTQ96DP5 389 aaKnown RBP14.54□□□□□ -0.08
LIMS2-216ENST00000494613 VMP1Q96GC9 406 aa14.54□□□□□ -0.08
LIMS2-216ENST00000494613 SCYL1Q96KG9 808 aa14.54□□□□□ -0.08
LIMS2-216ENST00000494613 NOL11Q9H8H0 719 aaKnown RBP14.54□□□□□ -0.08
LIMS2-216ENST00000494613 PSD3Q9NYI0 1048 aa14.54□□□□□ -0.08
LIMS2-216ENST00000494613 TMEM200CA6NKL6 621 aa14.53□□□□□ -0.08
LIMS2-216ENST00000494613 PLPP1O14494 284 aa14.53□□□□□ -0.08
LIMS2-216ENST00000494613 OR7A17O14581 309 aa14.53□□□□□ -0.08
LIMS2-216ENST00000494613 ITGA10O75578 1167 aa14.53□□□□□ -0.08
LIMS2-216ENST00000494613 SLC25A12O75746 678 aa14.53□□□□□ -0.08
LIMS2-216ENST00000494613 CLDN9O95484 217 aa14.53□□□□□ -0.08
LIMS2-216ENST00000494613 SNRPAP09012 282 aaKnown RBP14.53□□□□□ -0.08
LIMS2-216ENST00000494613 SSR2P43308 183 aa14.53□□□□□ -0.08
LIMS2-216ENST00000494613 RAP1GDS1P52306 607 aa14.53□□□□□ -0.08
LIMS2-216ENST00000494613 ALDH6A1Q02252 535 aaKnown RBP14.53□□□□□ -0.08
LIMS2-216ENST00000494613 ID2Q02363 134 aa14.53□□□□□ -0.08
LIMS2-216ENST00000494613 SERTAD2Q14140 314 aa14.53□□□□□ -0.08
LIMS2-216ENST00000494613 ZRSR2Q15696 482 aaKnown RBP14.53□□□□□ -0.08
LIMS2-216ENST00000494613 C16orf47Q6ZP98 133 aaPredicted RBP14.53□□□□□ -0.08
LIMS2-216ENST00000494613 GPR180Q86V85 440 aa14.53□□□□□ -0.08
LIMS2-216ENST00000494613 OR4N5Q8IXE1 308 aa14.53□□□□□ -0.08
LIMS2-216ENST00000494613 IFT20Q8IY31 132 aa14.53□□□□□ -0.08
LIMS2-216ENST00000494613 TMEM151AQ8N4L1 468 aa14.53□□□□□ -0.08
LIMS2-216ENST00000494613 TMEM156Q8N614 296 aa14.53□□□□□ -0.08
LIMS2-216ENST00000494613 PTGR2Q8N8N7 351 aaPredicted RBP14.53□□□□□ -0.08
LIMS2-216ENST00000494613 MORN4Q8NDC4 146 aa14.53□□□□□ -0.08
LIMS2-216ENST00000494613 DAZLQ92904 295 aaKnown RBP14.53□□□□□ -0.08
LIMS2-216ENST00000494613 ATP6V1E2Q96A05 226 aa14.53□□□□□ -0.08
LIMS2-216ENST00000494613 CCDC77Q9BR77 488 aa14.53□□□□□ -0.08
LIMS2-216ENST00000494613 DMRT3Q9NQL9 472 aa14.53□□□□□ -0.08
LIMS2-216ENST00000494613 MS4A12Q9NXJ0 267 aa14.53□□□□□ -0.08
LIMS2-216ENST00000494613 YARS2Q9Y2Z4 477 aaKnown RBP14.53□□□□□ -0.08
LIMS2-216ENST00000494613 SPACA6W5XKT8 324 aa14.53□□□□□ -0.08
LIMS2-216ENST00000494613 SYNDIG1LA6NDD5 238 aa14.52□□□□□ -0.09
LIMS2-216ENST00000494613 WASHC1A8K0Z3 465 aa14.52□□□□□ -0.09
LIMS2-216ENST00000494613 NPIPA5E9PKD4 350 aa14.52□□□□□ -0.09
LIMS2-216ENST00000494613 FOXE1O00358 373 aaPredicted RBP14.52□□□□□ -0.09
LIMS2-216ENST00000494613 PROM1O43490 865 aa14.52□□□□□ -0.09
LIMS2-216ENST00000494613 ASNA1O43681 348 aa14.52□□□□□ -0.09
LIMS2-216ENST00000494613 NME2P1O60361 137 aa14.52□□□□□ -0.09
LIMS2-216ENST00000494613 ZG16O60844 167 aa14.52□□□□□ -0.09
LIMS2-216ENST00000494613 NME2P22392 152 aa14.52□□□□□ -0.09
LIMS2-216ENST00000494613 PIK3CGP48736 1102 aa14.52□□□□□ -0.09
LIMS2-216ENST00000494613 ARFIP1P53367 373 aa14.52□□□□□ -0.09
LIMS2-216ENST00000494613 PER3P56645 1201 aa14.52□□□□□ -0.09
LIMS2-216ENST00000494613 CUL3Q13618 768 aa14.52□□□□□ -0.09
LIMS2-216ENST00000494613 TSNAXIP1Q2TAA8 658 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms