RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 IL1RAPQ9NPH3 570 aa13.15□□□□□ -0.3
VCP-207ENST00000493886 CUEDC1Q9NWM3 386 aaPredicted RBP13.15□□□□□ -0.3
VCP-207ENST00000493886 FBXL12Q9NXK8 326 aa13.15□□□□□ -0.3
VCP-207ENST00000493886 SPASTQ9UBP0 616 aa13.15□□□□□ -0.3
VCP-207ENST00000493886 ACSL5Q9ULC5 683 aa13.15□□□□□ -0.3
VCP-207ENST00000493886 NDUFS2O75306 463 aa13.15□□□□□ -0.3
VCP-207ENST00000493886 CENPAP49450 140 aa13.15□□□□□ -0.3
VCP-207ENST00000493886 RPS21P63220 83 aaKnown RBP13.15□□□□□ -0.3
VCP-207ENST00000493886 HBA1P69905 142 aa13.15□□□□□ -0.3
VCP-207ENST00000493886 COX10Q12887 443 aa13.15□□□□□ -0.3
VCP-207ENST00000493886 EPS8Q12929 822 aa13.15□□□□□ -0.3
VCP-207ENST00000493886 SGCGQ13326 291 aa13.15□□□□□ -0.3
VCP-207ENST00000493886 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.15□□□□□ -0.3
VCP-207ENST00000493886 ZNF691Q5VV52 312 aa13.15□□□□□ -0.3
VCP-207ENST00000493886 CBLL1Q75N03 491 aa13.15□□□□□ -0.3
VCP-207ENST00000493886 EIF3MQ7L2H7 374 aaKnown RBP13.15□□□□□ -0.3
VCP-207ENST00000493886 GOT1L1Q8NHS2 421 aaPredicted RBP13.15□□□□□ -0.3
VCP-207ENST00000493886 SMPDL3AQ92484 453 aa13.15□□□□□ -0.3
VCP-207ENST00000493886 MUL1Q969V5 352 aa13.15□□□□□ -0.3
VCP-207ENST00000493886 CIDECQ96AQ7 238 aaPredicted RBP13.15□□□□□ -0.3
VCP-207ENST00000493886 AIF1LQ9BQI0 150 aa13.15□□□□□ -0.3
VCP-207ENST00000493886 SORBS1Q9BX66 1292 aaKnown RBP13.15□□□□□ -0.3
VCP-207ENST00000493886 OSGEPL1Q9H4B0 414 aa13.15□□□□□ -0.3
VCP-207ENST00000493886 GPN2Q9H9Y4 310 aaPredicted RBP13.15□□□□□ -0.3
VCP-207ENST00000493886 NINQ8N4C6 2090 aa13.15□□□□□ -0.31
VCP-207ENST00000493886 CEP290O15078 2479 aa13.14□□□□□ -0.31
VCP-207ENST00000493886 A6NL46 340 aa13.14□□□□□ -0.31
VCP-207ENST00000493886 FAM25EA8MYX2 175 aa13.14□□□□□ -0.31
VCP-207ENST00000493886 C6orf47O95873 294 aa13.14□□□□□ -0.31
VCP-207ENST00000493886 PSMB5P28074 263 aa13.14□□□□□ -0.31
VCP-207ENST00000493886 AQP1P29972 269 aa13.14□□□□□ -0.31
VCP-207ENST00000493886 CASP9P55211 416 aa13.14□□□□□ -0.31
VCP-207ENST00000493886 CDK5R2Q13319 367 aa13.14□□□□□ -0.31
VCP-207ENST00000493886 MAPK11Q15759 364 aa13.14□□□□□ -0.31
VCP-207ENST00000493886 RAB30Q15771 203 aa13.14□□□□□ -0.31
VCP-207ENST00000493886 SLC9B2Q86UD5 537 aa13.14□□□□□ -0.31
VCP-207ENST00000493886 HIPK1Q86Z02 1210 aa13.14□□□□□ -0.31
VCP-207ENST00000493886 OR14C36Q8NHC7 312 aa13.14□□□□□ -0.31
VCP-207ENST00000493886 MAGED4Q96JG8 741 aa13.14□□□□□ -0.31
VCP-207ENST00000493886 C1QTNF2Q9BXJ5 285 aa13.14□□□□□ -0.31
VCP-207ENST00000493886 ALOXE3Q9BYJ1 711 aa13.14□□□□□ -0.31
VCP-207ENST00000493886 PCBD2Q9H0N5 130 aa13.14□□□□□ -0.31
VCP-207ENST00000493886 DAPK2Q9UIK4 370 aa13.14□□□□□ -0.31
VCP-207ENST00000493886 ENPP5Q9UJA9 477 aa13.14□□□□□ -0.31
VCP-207ENST00000493886 PNMA8BQ9ULN7 279 aaPredicted RBP13.14□□□□□ -0.31
VCP-207ENST00000493886 REV3LO60673 3130 aa13.14□□□□□ -0.31
VCP-207ENST00000493886 ARPC4-TTLL3A0A0A6YYG9 625 aa13.14□□□□□ -0.31
VCP-207ENST00000493886 ANKDD1BA6NHY2 528 aa13.14□□□□□ -0.31
VCP-207ENST00000493886 GPR37L1O60883 481 aa13.14□□□□□ -0.31
VCP-207ENST00000493886 SEMG1P04279 462 aa13.14□□□□□ -0.31
VCP-207ENST00000493886 PRKACAP17612 351 aa13.14□□□□□ -0.31
VCP-207ENST00000493886 CXCR2P25025 360 aa13.14□□□□□ -0.31
VCP-207ENST00000493886 BCAP31P51572 246 aa13.14□□□□□ -0.31
VCP-207ENST00000493886 TUBA3CQ13748 450 aa13.14□□□□□ -0.31
VCP-207ENST00000493886 CTF1Q16619 201 aa13.14□□□□□ -0.31
VCP-207ENST00000493886 MPEG1Q2M385 716 aa13.14□□□□□ -0.31
VCP-207ENST00000493886 TRIM16LQ309B1 348 aa13.14□□□□□ -0.31
VCP-207ENST00000493886 B3GNT8Q7Z7M8 397 aa13.14□□□□□ -0.31
VCP-207ENST00000493886 NAGSQ8N159 534 aa13.14□□□□□ -0.31
VCP-207ENST00000493886 MAL2Q969L2 176 aa13.14□□□□□ -0.31
VCP-207ENST00000493886 HSH2DQ96JZ2 352 aa13.14□□□□□ -0.31
VCP-207ENST00000493886 C12orf66Q96MD2 445 aa13.14□□□□□ -0.31
VCP-207ENST00000493886 RHBGQ9H310 441 aa13.14□□□□□ -0.31
VCP-207ENST00000493886 WASH6PQ9NQA3 447 aa13.14□□□□□ -0.31
VCP-207ENST00000493886 ZNF451Q9Y4E5 1061 aa13.14□□□□□ -0.31
VCP-207ENST00000493886 A0A1W2PPV9 198 aa13.13□□□□□ -0.31
VCP-207ENST00000493886 A0A1W2PQU0 124 aa13.13□□□□□ -0.31
VCP-207ENST00000493886 LATO43561 262 aa13.13□□□□□ -0.31
VCP-207ENST00000493886 TBX6O95947 436 aaPredicted RBP13.13□□□□□ -0.31
VCP-207ENST00000493886 IL3P08700 152 aa13.13□□□□□ -0.31
VCP-207ENST00000493886 ZNF12P17014 697 aa13.13□□□□□ -0.31
VCP-207ENST00000493886 PCMT1P22061 227 aa13.13□□□□□ -0.31
VCP-207ENST00000493886 CCR8P51685 355 aa13.13□□□□□ -0.31
VCP-207ENST00000493886 NCS1P62166 190 aa13.13□□□□□ -0.31
VCP-207ENST00000493886 CYP4F2P78329 520 aa13.13□□□□□ -0.31
VCP-207ENST00000493886 OR2T5Q6IEZ7 315 aa13.13□□□□□ -0.31
VCP-207ENST00000493886 ANGPTL8Q6UXH0 198 aa13.13□□□□□ -0.31
VCP-207ENST00000493886 ZNF852Q6ZMS4 543 aa13.13□□□□□ -0.31
VCP-207ENST00000493886 ANKRD53Q8N9V6 530 aa13.13□□□□□ -0.31
VCP-207ENST00000493886 OR2T29Q8NH02 315 aa13.13□□□□□ -0.31
VCP-207ENST00000493886 FAR1Q8WVX9 515 aa13.13□□□□□ -0.31
VCP-207ENST00000493886 ZFPM2Q8WW38 1151 aa13.13□□□□□ -0.31
VCP-207ENST00000493886 TRUB1Q8WWH5 349 aaKnown RBP13.13□□□□□ -0.31
VCP-207ENST00000493886 TBC1D20Q96BZ9 403 aa13.13□□□□□ -0.31
VCP-207ENST00000493886 MTERF3Q96E29 417 aa13.13□□□□□ -0.31
VCP-207ENST00000493886 INSM2Q96T92 566 aaPredicted RBP13.13□□□□□ -0.31
VCP-207ENST00000493886 SLC6A17Q9H1V8 727 aa13.13□□□□□ -0.31
VCP-207ENST00000493886 S1PR5Q9H228 398 aa13.13□□□□□ -0.31
VCP-207ENST00000493886 TM9SF3Q9HD45 589 aa13.13□□□□□ -0.31
VCP-207ENST00000493886 AHSPQ9NZD4 102 aa13.13□□□□□ -0.31
VCP-207ENST00000493886 CLEC1BQ9P126 229 aa13.13□□□□□ -0.31
VCP-207ENST00000493886 ERGIC3Q9Y282 383 aa13.13□□□□□ -0.31
VCP-207ENST00000493886 ZNF99A8MXY4 864 aaPredicted RBP13.13□□□□□ -0.31
VCP-207ENST00000493886 FKBP9O95302 570 aa13.13□□□□□ -0.31
VCP-207ENST00000493886 FABP3P05413 133 aa13.13□□□□□ -0.31
VCP-207ENST00000493886 NTSR1P30989 418 aa13.13□□□□□ -0.31
VCP-207ENST00000493886 PCGF2P35227 344 aa13.13□□□□□ -0.31
VCP-207ENST00000493886 VLDLRP98155 873 aa13.13□□□□□ -0.31
VCP-207ENST00000493886 TMEM196Q5HYL7 178 aa13.13□□□□□ -0.31
VCP-207ENST00000493886 SHQ1Q6PI26 577 aaKnown RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms