RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 ANKZF1Q9H8Y5 726 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 JPH1Q9HDC5 661 aaPredicted RBP4.02□□□□□ -1.77
BRCA1-220ENST00000492859 MLXIPLQ9NP71 852 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 TIGARQ9NQ88 270 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 OR2S2Q9NQN1 319 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 PRDM7Q9NQW5 492 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 FAM207AQ9NSI2 230 aaPredicted RBP4.02□□□□□ -1.77
BRCA1-220ENST00000492859 CLEC1BQ9P126 229 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 MRM2Q9UI43 246 aaKnown RBP4.02□□□□□ -1.77
BRCA1-220ENST00000492859 STOML2Q9UJZ1 356 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 DBR1Q9UK59 544 aaKnown RBP4.02□□□□□ -1.77
BRCA1-220ENST00000492859 FBXL3Q9UKT7 428 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 IKZF3Q9UKT9 509 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 NDRG2Q9UN36 371 aaKnown RBP4.02□□□□□ -1.77
BRCA1-220ENST00000492859 NDUFAF1Q9Y375 327 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 PRELID3BQ9Y3B1 194 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 SLCO1B1Q9Y6L6 691 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 CECR2Q9BXF3 1484 aa4.01□□□□□ -1.77
BRCA1-220ENST00000492859 TRAV26-1A0A087WT03 109 aa4.01□□□□□ -1.77
BRCA1-220ENST00000492859 A0A087WWL8 130 aa4.01□□□□□ -1.77
BRCA1-220ENST00000492859 A0A1B0GV90 55 aa4.01□□□□□ -1.77
BRCA1-220ENST00000492859 TMEM82A0PJX8 343 aa4.01□□□□□ -1.77
BRCA1-220ENST00000492859 CGB1A6NKQ9 187 aa4.01□□□□□ -1.77
BRCA1-220ENST00000492859 E5RJQ4 531 aa4.01□□□□□ -1.77
BRCA1-220ENST00000492859 F2RL2O00254 374 aa4.01□□□□□ -1.77
BRCA1-220ENST00000492859 B4GALT5O43286 388 aa4.01□□□□□ -1.77
BRCA1-220ENST00000492859 CST8O60676 142 aa4.01□□□□□ -1.77
BRCA1-220ENST00000492859 PRAMEF2O60811 474 aa4.01□□□□□ -1.77
BRCA1-220ENST00000492859 TM7SF2O76062 418 aa4.01□□□□□ -1.77
BRCA1-220ENST00000492859 MOCS3O95396 460 aa4.01□□□□□ -1.77
BRCA1-220ENST00000492859 FTH1P02794 183 aa4.01□□□□□ -1.77
BRCA1-220ENST00000492859 ERCC1P07992 297 aaPredicted RBP4.01□□□□□ -1.77
BRCA1-220ENST00000492859 SAGP10523 405 aaPredicted RBP4.01□□□□□ -1.77
BRCA1-220ENST00000492859 CD8BP10966 210 aa4.01□□□□□ -1.77
BRCA1-220ENST00000492859 DBTP11182 482 aaKnown RBP4.01□□□□□ -1.77
BRCA1-220ENST00000492859 NID1P14543 1247 aa4.01□□□□□ -1.77
BRCA1-220ENST00000492859 B4GALT1P15291 398 aa4.01□□□□□ -1.77
BRCA1-220ENST00000492859 TPH1P17752 444 aa4.01□□□□□ -1.77
BRCA1-220ENST00000492859 PSMC3P17980 439 aa4.01□□□□□ -1.77
BRCA1-220ENST00000492859 TCP1P17987 556 aaKnown RBP4.01□□□□□ -1.77
BRCA1-220ENST00000492859 ME2P23368 584 aa4.01□□□□□ -1.77
BRCA1-220ENST00000492859 GLRA1P23415 457 aa4.01□□□□□ -1.77
BRCA1-220ENST00000492859 AZGP1P25311 298 aaKnown RBP4.01□□□□□ -1.77
BRCA1-220ENST00000492859 MGAT1P26572 445 aa4.01□□□□□ -1.77
BRCA1-220ENST00000492859 DPP4P27487 766 aa4.01□□□□□ -1.77
BRCA1-220ENST00000492859 HTR2AP28223 471 aa4.01□□□□□ -1.77
BRCA1-220ENST00000492859 PPP2R1BP30154 601 aa4.01□□□□□ -1.77
BRCA1-220ENST00000492859 STX2P32856 288 aa4.01□□□□□ -1.77
BRCA1-220ENST00000492859 TALDO1P37837 337 aa4.01□□□□□ -1.77
BRCA1-220ENST00000492859 PNPLA4P41247 253 aa4.01□□□□□ -1.77
BRCA1-220ENST00000492859 MRPL19P49406 292 aaKnown RBP4.01□□□□□ -1.77
BRCA1-220ENST00000492859 EFNA5P52803 228 aa4.01□□□□□ -1.77
BRCA1-220ENST00000492859 F2RL1P55085 397 aa4.01□□□□□ -1.77
BRCA1-220ENST00000492859 HERV-K104P63124 156 aa4.01□□□□□ -1.77
BRCA1-220ENST00000492859 EGR3Q06889 387 aa4.01□□□□□ -1.77
BRCA1-220ENST00000492859 LSAMPQ13449 338 aa4.01□□□□□ -1.77
BRCA1-220ENST00000492859 ZNF268Q14587 947 aaPredicted RBP4.01□□□□□ -1.77
BRCA1-220ENST00000492859 SLC9A3R2Q15599 337 aa4.01□□□□□ -1.77
BRCA1-220ENST00000492859 ZBTB6Q15916 424 aa4.01□□□□□ -1.77
BRCA1-220ENST00000492859 GUK1Q16774 197 aa4.01□□□□□ -1.77
BRCA1-220ENST00000492859 CDO1Q16878 200 aa4.01□□□□□ -1.77
BRCA1-220ENST00000492859 IMPG1Q17R60 797 aa4.01□□□□□ -1.77
BRCA1-220ENST00000492859 ZSCAN23Q3MJ62 389 aa4.01□□□□□ -1.77
BRCA1-220ENST00000492859 KIAA1755Q5JYT7 1200 aa4.01□□□□□ -1.77
BRCA1-220ENST00000492859 PMS2CLQ68D20 193 aa4.01□□□□□ -1.77
BRCA1-220ENST00000492859 EFCAB12Q6NXP0 572 aa4.01□□□□□ -1.77
BRCA1-220ENST00000492859 ZFP1Q6P2D0 407 aa4.01□□□□□ -1.77
BRCA1-220ENST00000492859 RNASEKQ6P5S7 137 aaKnown RBP4.01□□□□□ -1.77
BRCA1-220ENST00000492859 CD300LGQ6UXG3 332 aa4.01□□□□□ -1.77
BRCA1-220ENST00000492859 LRRN1Q6UXK5 716 aa4.01□□□□□ -1.77
BRCA1-220ENST00000492859 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.01□□□□□ -1.77
BRCA1-220ENST00000492859 CERS6Q6ZMG9 384 aa4.01□□□□□ -1.77
BRCA1-220ENST00000492859 PRR23BQ6ZRT6 265 aa4.01□□□□□ -1.77
BRCA1-220ENST00000492859 PEX26Q7Z412 305 aa4.01□□□□□ -1.77
BRCA1-220ENST00000492859 S100A7AQ86SG5 101 aa4.01□□□□□ -1.77
BRCA1-220ENST00000492859 ZNF546Q86UE3 836 aa4.01□□□□□ -1.77
BRCA1-220ENST00000492859 ALYREFQ86V81 257 aaKnown RBP4.01□□□□□ -1.77
BRCA1-220ENST00000492859 DHFR2Q86XF0 187 aa4.01□□□□□ -1.77
BRCA1-220ENST00000492859 ZC3H3Q8IXZ2 948 aaKnown RBP4.01□□□□□ -1.77
BRCA1-220ENST00000492859 FUKQ8N0W3 1084 aa4.01□□□□□ -1.77
BRCA1-220ENST00000492859 HJURPQ8NCD3 748 aaPredicted RBP4.01□□□□□ -1.77
BRCA1-220ENST00000492859 OR4C5Q8NGB2 326 aa4.01□□□□□ -1.77
BRCA1-220ENST00000492859 OR10S1Q8NGN2 331 aa4.01□□□□□ -1.77
BRCA1-220ENST00000492859 OR6X1Q8NH79 312 aa4.01□□□□□ -1.77
BRCA1-220ENST00000492859 MRGPRDQ8TDS7 321 aa4.01□□□□□ -1.77
BRCA1-220ENST00000492859 WFIKKN2Q8TEU8 576 aa4.01□□□□□ -1.77
BRCA1-220ENST00000492859 ASB5Q8WWX0 329 aa4.01□□□□□ -1.77
BRCA1-220ENST00000492859 NSMAFQ92636 917 aa4.01□□□□□ -1.77
BRCA1-220ENST00000492859 LENG9Q96B70 501 aa4.01□□□□□ -1.77
BRCA1-220ENST00000492859 FOXRED1Q96CU9 486 aaPredicted RBP4.01□□□□□ -1.77
BRCA1-220ENST00000492859 TM4SF19Q96DZ7 209 aa4.01□□□□□ -1.77
BRCA1-220ENST00000492859 PPP1R16AQ96I34 528 aa4.01□□□□□ -1.77
BRCA1-220ENST00000492859 TMX3Q96JJ7 454 aa4.01□□□□□ -1.77
BRCA1-220ENST00000492859 C3orf30Q96M34 536 aa4.01□□□□□ -1.77
BRCA1-220ENST00000492859 RILPQ96NA2 401 aa4.01□□□□□ -1.77
BRCA1-220ENST00000492859 ZNF285Q96NJ3 590 aa4.01□□□□□ -1.77
BRCA1-220ENST00000492859 XPO6Q96QU8 1125 aaKnown RBP4.01□□□□□ -1.77
BRCA1-220ENST00000492859 OR5B2Q96R09 309 aa4.01□□□□□ -1.77
BRCA1-220ENST00000492859 MYOCQ99972 504 aa4.01□□□□□ -1.77
BRCA1-220ENST00000492859 C17orf62Q9BQA9 187 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms