RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 NADKO95544 446 aaPredicted RBP11.86□□□□□ -0.51
HMGN1-220ENST00000492280 STSP08842 583 aa11.86□□□□□ -0.51
HMGN1-220ENST00000492280 PTNP21246 168 aa11.86□□□□□ -0.51
HMGN1-220ENST00000492280 CD72P21854 359 aa11.86□□□□□ -0.51
HMGN1-220ENST00000492280 LBX1P52954 281 aa11.86□□□□□ -0.51
HMGN1-220ENST00000492280 LIM2P55344 173 aa11.86□□□□□ -0.51
HMGN1-220ENST00000492280 TOP3AQ13472 1001 aaPredicted RBP11.86□□□□□ -0.51
HMGN1-220ENST00000492280 GPM6BQ13491 265 aa11.86□□□□□ -0.51
HMGN1-220ENST00000492280 TUBA3CQ13748 450 aa11.86□□□□□ -0.51
HMGN1-220ENST00000492280 PUM1Q14671 1186 aaKnown RBP eCLIP11.86□□□□□ -0.511e-6■□□□□ 9.6
HMGN1-220ENST00000492280 TMEM31Q5JXX7 168 aa11.86□□□□□ -0.51
HMGN1-220ENST00000492280 BCDIN3DQ7Z5W3 292 aaKnown RBP11.86□□□□□ -0.51
HMGN1-220ENST00000492280 COMTD1Q86VU5 262 aa11.86□□□□□ -0.51
HMGN1-220ENST00000492280 P2RY8Q86VZ1 359 aa11.86□□□□□ -0.51
HMGN1-220ENST00000492280 DCUN1D3Q8IWE4 304 aa11.86□□□□□ -0.51
HMGN1-220ENST00000492280 KLHDC8AQ8IYD2 350 aa11.86□□□□□ -0.51
HMGN1-220ENST00000492280 GANCQ8TET4 914 aa11.86□□□□□ -0.51
HMGN1-220ENST00000492280 COPS4Q9BT78 406 aa11.86□□□□□ -0.51
HMGN1-220ENST00000492280 AICDAQ9GZX7 198 aa11.86□□□□□ -0.51
HMGN1-220ENST00000492280 KLHL31Q9H511 634 aa11.86□□□□□ -0.51
HMGN1-220ENST00000492280 EPS8L2Q9H6S3 715 aa11.86□□□□□ -0.51
HMGN1-220ENST00000492280 PCDHGB3Q9Y5G1 929 aa11.86□□□□□ -0.51
HMGN1-220ENST00000492280 TRBV4-1A0A0J9YWV2 114 aa11.85□□□□□ -0.51
HMGN1-220ENST00000492280 KLHL33A6NCF5 533 aa11.85□□□□□ -0.51
HMGN1-220ENST00000492280 KAT7O95251 611 aa11.85□□□□□ -0.51
HMGN1-220ENST00000492280 NTN1O95631 604 aa11.85□□□□□ -0.51
HMGN1-220ENST00000492280 HSMCR30P0CW71 290 aa11.85□□□□□ -0.51
HMGN1-220ENST00000492280 C8orf89P0DMQ9 161 aa11.85□□□□□ -0.51
HMGN1-220ENST00000492280 GRK5P34947 590 aa11.85□□□□□ -0.51
HMGN1-220ENST00000492280 PRKAG1P54619 331 aa11.85□□□□□ -0.51
HMGN1-220ENST00000492280 DSTNP60981 165 aa11.85□□□□□ -0.51
HMGN1-220ENST00000492280 SNRPNP63162 240 aaKnown RBP11.85□□□□□ -0.51
HMGN1-220ENST00000492280 EEF1A2Q05639 463 aaKnown RBP11.85□□□□□ -0.51
HMGN1-220ENST00000492280 IL18R1Q13478 541 aa11.85□□□□□ -0.51
HMGN1-220ENST00000492280 IRF4Q15306 451 aa11.85□□□□□ -0.51
HMGN1-220ENST00000492280 TEAD4Q15561 434 aa11.85□□□□□ -0.51
HMGN1-220ENST00000492280 MAPK11Q15759 364 aa11.85□□□□□ -0.51
HMGN1-220ENST00000492280 MLF2Q15773 248 aaPredicted RBP11.85□□□□□ -0.51
HMGN1-220ENST00000492280 ZNF829Q3KNS6 432 aaPredicted RBP11.85□□□□□ -0.51
HMGN1-220ENST00000492280 SPDYE7PQ495Y7 208 aa11.85□□□□□ -0.51
HMGN1-220ENST00000492280 AGBL4Q5VU57 503 aa11.85□□□□□ -0.51
HMGN1-220ENST00000492280 DEF8Q6ZN54 512 aa11.85□□□□□ -0.51
HMGN1-220ENST00000492280 LRRTM4Q86VH4 590 aa11.85□□□□□ -0.51
HMGN1-220ENST00000492280 BORCS5Q969J3 196 aa11.85□□□□□ -0.51
HMGN1-220ENST00000492280 ZNF566Q969W8 418 aa11.85□□□□□ -0.51
HMGN1-220ENST00000492280 TMEM19Q96HH6 336 aa11.85□□□□□ -0.51
HMGN1-220ENST00000492280 FCRL4Q96PJ5 515 aa11.85□□□□□ -0.51
HMGN1-220ENST00000492280 EPYCQ99645 322 aa11.85□□□□□ -0.51
HMGN1-220ENST00000492280 DPEP2Q9H4A9 486 aa11.85□□□□□ -0.51
HMGN1-220ENST00000492280 SERHL2Q9H4I8 314 aa11.85□□□□□ -0.51
HMGN1-220ENST00000492280 EHD1Q9H4M9 534 aa11.85□□□□□ -0.51
HMGN1-220ENST00000492280 KCNK12Q9HB15 430 aa11.85□□□□□ -0.51
HMGN1-220ENST00000492280 CD93Q9NPY3 652 aa11.85□□□□□ -0.51
HMGN1-220ENST00000492280 CA5BQ9Y2D0 317 aa11.85□□□□□ -0.51
HMGN1-220ENST00000492280 VPS13AQ96RL7 3174 aa11.85□□□□□ -0.51
HMGN1-220ENST00000492280 IGKV1-8A0A0C4DH67 115 aa11.85□□□□□ -0.51
HMGN1-220ENST00000492280 A0A1W2PPV9 198 aa11.85□□□□□ -0.51
HMGN1-220ENST00000492280 FFAR1O14842 300 aa11.85□□□□□ -0.51
HMGN1-220ENST00000492280 CD36P16671 472 aa11.85□□□□□ -0.51
HMGN1-220ENST00000492280 FCARP24071 287 aa11.85□□□□□ -0.51
HMGN1-220ENST00000492280 TIE1P35590 1138 aa11.85□□□□□ -0.51
HMGN1-220ENST00000492280 BSGP35613 385 aa11.85□□□□□ -0.51
HMGN1-220ENST00000492280 CYP2A13Q16696 494 aa11.85□□□□□ -0.51
HMGN1-220ENST00000492280 KHDRBS2Q5VWX1 349 aaKnown RBP11.85□□□□□ -0.51
HMGN1-220ENST00000492280 KIAA1211LQ6NV74 962 aa11.85□□□□□ -0.51
HMGN1-220ENST00000492280 TSPYL5Q86VY4 417 aaPredicted RBP11.85□□□□□ -0.51
HMGN1-220ENST00000492280 ANKRD13BQ86YJ7 626 aa11.85□□□□□ -0.51
HMGN1-220ENST00000492280 LACC1Q8IV20 430 aa11.85□□□□□ -0.51
HMGN1-220ENST00000492280 SHISA5Q8N114 240 aa11.85□□□□□ -0.51
HMGN1-220ENST00000492280 CPA6Q8N4T0 437 aa11.85□□□□□ -0.51
HMGN1-220ENST00000492280 DRAXINQ8NBI3 349 aaPredicted RBP11.85□□□□□ -0.51
HMGN1-220ENST00000492280 AQP11Q8NBQ7 271 aa11.85□□□□□ -0.51
HMGN1-220ENST00000492280 OR4D11Q8NGI4 311 aa11.85□□□□□ -0.51
HMGN1-220ENST00000492280 DOK4Q8TEW6 326 aa11.85□□□□□ -0.51
HMGN1-220ENST00000492280 SLC38A5Q8WUX1 472 aa11.85□□□□□ -0.51
HMGN1-220ENST00000492280 TM4SF18Q96CE8 201 aa11.85□□□□□ -0.51
HMGN1-220ENST00000492280 WDR34Q96EX3 536 aa11.85□□□□□ -0.51
HMGN1-220ENST00000492280 FERD3LQ96RJ6 166 aa11.85□□□□□ -0.51
HMGN1-220ENST00000492280 INSM2Q96T92 566 aaPredicted RBP11.85□□□□□ -0.51
HMGN1-220ENST00000492280 QRSL1Q9H0R6 528 aaKnown RBP11.85□□□□□ -0.51
HMGN1-220ENST00000492280 EPHX3Q9H6B9 360 aa11.85□□□□□ -0.51
HMGN1-220ENST00000492280 POLE4Q9NR33 117 aa11.85□□□□□ -0.51
HMGN1-220ENST00000492280 TRBV23OR9-2A0A075B6M9 112 aa11.84□□□□□ -0.51
HMGN1-220ENST00000492280 LOC100506127A0A0U1RQW1 187 aa11.84□□□□□ -0.51
HMGN1-220ENST00000492280 M0R3G1 203 aa11.84□□□□□ -0.51
HMGN1-220ENST00000492280 GABARAPO95166 117 aa11.84□□□□□ -0.51
HMGN1-220ENST00000492280 RB1P06400 928 aa11.84□□□□□ -0.51
HMGN1-220ENST00000492280 HNRNPCP07910 306 aaKnown RBP eCLIP11.84□□□□□ -0.515e-6■■■□□ 18.1
HMGN1-220ENST00000492280 SLC35G4P0C7Q5 338 aa11.84□□□□□ -0.51
HMGN1-220ENST00000492280 JUNDP17535 347 aa11.84□□□□□ -0.51
HMGN1-220ENST00000492280 KELP23276 732 aa11.84□□□□□ -0.51
HMGN1-220ENST00000492280 DPTQ07507 201 aa11.84□□□□□ -0.51
HMGN1-220ENST00000492280 SYPL1Q16563 259 aa11.84□□□□□ -0.51
HMGN1-220ENST00000492280 MOGQ16653 247 aa11.84□□□□□ -0.51
HMGN1-220ENST00000492280 C2orf27AQ580R0 203 aa11.84□□□□□ -0.51
HMGN1-220ENST00000492280 TRIM40Q6P9F5 258 aa11.84□□□□□ -0.51
HMGN1-220ENST00000492280 CENPSQ8N2Z9 138 aa11.84□□□□□ -0.51
HMGN1-220ENST00000492280 CLIP4Q8N3C7 705 aa11.84□□□□□ -0.51
HMGN1-220ENST00000492280 HDDC3Q8N4P3 179 aa11.84□□□□□ -0.51
HMGN1-220ENST00000492280 OXR1Q8N573 874 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms