RNA–Protein interactions for RNA: ENST00000491139.5

NELFE-210, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-210ENST00000491139 TMEM52Q8NDY8 209 aa19.26■□□□□ 0.67
NELFE-210ENST00000491139 WFDC11Q8NEX6 87 aa19.26■□□□□ 0.67
NELFE-210ENST00000491139 GABPB2Q8TAK5 448 aaPredicted RBP19.26■□□□□ 0.67
NELFE-210ENST00000491139 DAZLQ92904 295 aaKnown RBP19.26■□□□□ 0.67
NELFE-210ENST00000491139 SMR3AQ99954 134 aa19.26■□□□□ 0.67
NELFE-210ENST00000491139 LZTFL1Q9NQ48 299 aa19.26■□□□□ 0.67
NELFE-210ENST00000491139 TUBA8Q9NY65 449 aaPredicted RBP19.26■□□□□ 0.67
NELFE-210ENST00000491139 CBLCQ9ULV8 474 aa19.26■□□□□ 0.67
NELFE-210ENST00000491139 KCNE2Q9Y6J6 123 aa19.26■□□□□ 0.67
NELFE-210ENST00000491139 ARHGAP21Q5T5U3 1957 aa19.26■□□□□ 0.67
NELFE-210ENST00000491139 A0A0G2JN53 185 aa19.25■□□□□ 0.67
NELFE-210ENST00000491139 B3GALT2O43825 422 aa19.25■□□□□ 0.67
NELFE-210ENST00000491139 ENO2P09104 434 aaPredicted RBP19.25■□□□□ 0.67
NELFE-210ENST00000491139 PDAP1Q13442 181 aaKnown RBP19.25■□□□□ 0.67
NELFE-210ENST00000491139 KEAP1Q14145 624 aa19.25■□□□□ 0.67
NELFE-210ENST00000491139 DEFB113Q30KQ7 82 aa19.25■□□□□ 0.67
NELFE-210ENST00000491139 FBXW10Q5XX13 1052 aa19.25■□□□□ 0.67
NELFE-210ENST00000491139 OPN5Q6U736 354 aa19.25■□□□□ 0.67
NELFE-210ENST00000491139 AGGF1Q8N302 714 aaeCLIP19.25■□□□□ 0.67
NELFE-210ENST00000491139 FAM47BQ8NA70 645 aa19.25■□□□□ 0.67
NELFE-210ENST00000491139 MORN4Q8NDC4 146 aa19.25■□□□□ 0.67
NELFE-210ENST00000491139 C18orf12Q96KH6 178 aa19.25■□□□□ 0.67
NELFE-210ENST00000491139 SIGLEC10Q96LC7 697 aa19.25■□□□□ 0.67
NELFE-210ENST00000491139 FN1P02751 2386 aaKnown RBP19.24■□□□□ 0.67
NELFE-210ENST00000491139 A0A088AWK7 358 aa19.24■□□□□ 0.67
NELFE-210ENST00000491139 DVL2O14641 736 aa19.24■□□□□ 0.67
NELFE-210ENST00000491139 ERI3O43414 337 aaKnown RBP19.24■□□□□ 0.67
NELFE-210ENST00000491139 ZNF10P21506 573 aaPredicted RBP19.24■□□□□ 0.67
NELFE-210ENST00000491139 GABRB3P28472 473 aa19.24■□□□□ 0.67
NELFE-210ENST00000491139 ADSLP30566 484 aaPredicted RBP19.24■□□□□ 0.67
NELFE-210ENST00000491139 MAGEA3P43357 314 aa19.24■□□□□ 0.67
NELFE-210ENST00000491139 DAZAP2Q15038 168 aaPredicted RBP19.24■□□□□ 0.67
NELFE-210ENST00000491139 TAOK1Q7L7X3 1001 aa19.24■□□□□ 0.67
NELFE-210ENST00000491139 KLHDC8AQ8IYD2 350 aa19.24■□□□□ 0.67
NELFE-210ENST00000491139 OR5L2Q8NGL0 311 aa19.24■□□□□ 0.67
NELFE-210ENST00000491139 OR8K3Q8NH51 312 aa19.24■□□□□ 0.67
NELFE-210ENST00000491139 PTPMT1Q8WUK0 201 aaPredicted RBP19.24■□□□□ 0.67
NELFE-210ENST00000491139 RNASE6Q93091 150 aaKnown RBP19.24■□□□□ 0.67
NELFE-210ENST00000491139 SH3GL2Q99962 352 aa19.24■□□□□ 0.67
NELFE-210ENST00000491139 OR8D2Q9GZM6 311 aa19.24■□□□□ 0.67
NELFE-210ENST00000491139 SEMA4BQ9NPR2 832 aaPredicted RBP19.24■□□□□ 0.67
NELFE-210ENST00000491139 SPRR3Q9UBC9 169 aa19.24■□□□□ 0.67
NELFE-210ENST00000491139 SLC22A14Q9Y267 594 aa19.24■□□□□ 0.67
NELFE-210ENST00000491139 ATG4BQ9Y4P1 393 aa19.24■□□□□ 0.67
NELFE-210ENST00000491139 CTNSO60931 367 aa19.23■□□□□ 0.67
NELFE-210ENST00000491139 ATE1O95260 518 aa19.23■□□□□ 0.67
NELFE-210ENST00000491139 CCL3P10147 92 aa19.23■□□□□ 0.67
NELFE-210ENST00000491139 ENDOUP21128 410 aaKnown RBP19.23■□□□□ 0.67
NELFE-210ENST00000491139 BMP5P22003 454 aa19.23■□□□□ 0.67
NELFE-210ENST00000491139 ASCL1P50553 236 aa19.23■□□□□ 0.67
NELFE-210ENST00000491139 RNF4P78317 190 aa19.23■□□□□ 0.67
NELFE-210ENST00000491139 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP19.23■□□□□ 0.67
NELFE-210ENST00000491139 FBXW8Q8N3Y1 598 aa19.23■□□□□ 0.67
NELFE-210ENST00000491139 RELL2Q8NC24 303 aaPredicted RBP19.23■□□□□ 0.67
NELFE-210ENST00000491139 TTLQ8NG68 377 aa19.23■□□□□ 0.67
NELFE-210ENST00000491139 OR14A16Q8NHC5 309 aa19.23■□□□□ 0.67
NELFE-210ENST00000491139 CCT6BQ92526 530 aa19.23■□□□□ 0.67
NELFE-210ENST00000491139 MS4A6EQ96DS6 147 aa19.23■□□□□ 0.67
NELFE-210ENST00000491139 ALOXE3Q9BYJ1 711 aa19.23■□□□□ 0.67
NELFE-210ENST00000491139 KCNF1Q9H3M0 494 aa19.23■□□□□ 0.67
NELFE-210ENST00000491139 VTI1BQ9UEU0 232 aa19.23■□□□□ 0.67
NELFE-210ENST00000491139 PCDHGB3Q9Y5G1 929 aa19.23■□□□□ 0.67
NELFE-210ENST00000491139 SEC23IPQ9Y6Y8 1000 aaKnown RBP19.23■□□□□ 0.67
NELFE-210ENST00000491139 CSPG4Q6UVK1 2322 aa19.22■□□□□ 0.67
NELFE-210ENST00000491139 LRIT2A6NDA9 550 aa19.22■□□□□ 0.67
NELFE-210ENST00000491139 ZNF354AO60765 605 aaPredicted RBP19.22■□□□□ 0.67
NELFE-210ENST00000491139 H2AFYO75367 372 aaKnown RBP19.22■□□□□ 0.67
NELFE-210ENST00000491139 AHSGP02765 367 aa19.22■□□□□ 0.67
NELFE-210ENST00000491139 INHBBP09529 407 aa19.22■□□□□ 0.67
NELFE-210ENST00000491139 TNNI3P19429 210 aa19.22■□□□□ 0.67
NELFE-210ENST00000491139 HNRNPH1P31943 449 aaKnown RBP19.22■□□□□ 0.67
NELFE-210ENST00000491139 PIGAP37287 484 aa19.22■□□□□ 0.67
NELFE-210ENST00000491139 STX4Q12846 297 aa19.22■□□□□ 0.67
NELFE-210ENST00000491139 RCN2Q14257 317 aa19.22■□□□□ 0.67
NELFE-210ENST00000491139 FBXL19-AS1Q494R0 122 aa19.22■□□□□ 0.67
NELFE-210ENST00000491139 ULK2Q8IYT8 1036 aa19.22■□□□□ 0.67
NELFE-210ENST00000491139 ZNF321PQ8N8H1 164 aa19.22■□□□□ 0.67
NELFE-210ENST00000491139 MTRF1LQ9UGC7 380 aaKnown RBP19.22■□□□□ 0.67
NELFE-210ENST00000491139 FOXD3Q9UJU5 478 aaPredicted RBP19.22■□□□□ 0.67
NELFE-210ENST00000491139 MYOCOSA0A1B0GUC4 107 aa19.21■□□□□ 0.67
NELFE-210ENST00000491139 TUBAL3A6NHL2 446 aa19.21■□□□□ 0.67
NELFE-210ENST00000491139 CYR61O00622 381 aa19.21■□□□□ 0.67
NELFE-210ENST00000491139 ZSCAN12O43309 604 aa19.21■□□□□ 0.67
NELFE-210ENST00000491139 PGAM1P18669 254 aa19.21■□□□□ 0.67
NELFE-210ENST00000491139 TACR1P25103 407 aa19.21■□□□□ 0.67
NELFE-210ENST00000491139 HOXC12P31275 282 aa19.21■□□□□ 0.67
NELFE-210ENST00000491139 PGGT1BP53609 377 aa19.21■□□□□ 0.67
NELFE-210ENST00000491139 PLA2G16P53816 162 aa19.21■□□□□ 0.67
NELFE-210ENST00000491139 CRYMQ14894 314 aa19.21■□□□□ 0.67
NELFE-210ENST00000491139 EFTUD2Q15029 972 aaKnown RBP eCLIP19.21■□□□□ 0.676e-8■■■□□ 17
NELFE-210ENST00000491139 SBSNQ6UWP8 590 aa19.21■□□□□ 0.67
NELFE-210ENST00000491139 CLEC9AQ6UXN8 241 aa19.21■□□□□ 0.67
NELFE-210ENST00000491139 TMIGD1Q6UXZ0 262 aa19.21■□□□□ 0.67
NELFE-210ENST00000491139 SEM1Q6ZVN7 128 aa19.21■□□□□ 0.67
NELFE-210ENST00000491139 QRFPRQ96P65 431 aa19.21■□□□□ 0.67
NELFE-210ENST00000491139 SERINC2Q96SA4 455 aa19.21■□□□□ 0.67
NELFE-210ENST00000491139 NEUROD4Q9HD90 331 aa19.21■□□□□ 0.67
NELFE-210ENST00000491139 DAPP1Q9UN19 280 aa19.21■□□□□ 0.67
NELFE-210ENST00000491139 TLN2Q9Y4G6 2542 aa19.2■□□□□ 0.66
NELFE-210ENST00000491139 C17orf105B2RV13 164 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms