RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, human

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNRNP40-206	ENST00000489853	ZNF285	Q96NJ3	590 aa		4.57	□□□□□ -1.68
SNRNP40-206	ENST00000489853	CLUHP3	Q96NS8	147 aa		4.57	□□□□□ -1.68
SNRNP40-206	ENST00000489853	TREX2	Q9BQ50	279 aa	Predicted RBP	4.57	□□□□□ -1.68
SNRNP40-206	ENST00000489853	SORBS1	Q9BX66	1292 aa	Known RBP	4.57	□□□□□ -1.68
SNRNP40-206	ENST00000489853	C1QTNF6	Q9BXI9	259 aa		4.57	□□□□□ -1.68
SNRNP40-206	ENST00000489853	KCNH6	Q9H252	994 aa		4.57	□□□□□ -1.68
SNRNP40-206	ENST00000489853	OR51J1	Q9H342	316 aa		4.57	□□□□□ -1.68
SNRNP40-206	ENST00000489853	FN3K	Q9H479	309 aa		4.57	□□□□□ -1.68
SNRNP40-206	ENST00000489853	AGO4	Q9HCK5	861 aa	Known RBP	4.57	□□□□□ -1.68
SNRNP40-206	ENST00000489853	AMBN	Q9NP70	447 aa		4.57	□□□□□ -1.68
SNRNP40-206	ENST00000489853	GPR83	Q9NYM4	423 aa		4.57	□□□□□ -1.68
SNRNP40-206	ENST00000489853	MPP6	Q9NZW5	540 aa		4.57	□□□□□ -1.68
SNRNP40-206	ENST00000489853	KLHL8	Q9P2G9	620 aa	Predicted RBP	4.57	□□□□□ -1.68
SNRNP40-206	ENST00000489853	PLEKHB1	Q9UF11	243 aa	Predicted RBP	4.57	□□□□□ -1.68
SNRNP40-206	ENST00000489853	POMT2	Q9UKY4	750 aa		4.57	□□□□□ -1.68
SNRNP40-206	ENST00000489853	ERVK-19	Q9WJR5	959 aa		4.57	□□□□□ -1.68
SNRNP40-206	ENST00000489853	SLC22A7	Q9Y694	548 aa		4.57	□□□□□ -1.68
SNRNP40-206	ENST00000489853	LOC102723532	A0A0G2JNH3	316 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	HYKK	A2RU49	373 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	FAM74A7	A6NL05	159 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	EFCAB7	A8K855	629 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	FAM220BP	B1ANY3	271 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	SULT1C2	O00338	296 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	GFRA2	O00451	464 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	SOX1	O00570	391 aa	Predicted RBP	4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	SUSD5	O60279	629 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	CRCP	O75575	148 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	CDRT1	O95170	752 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	RLN2	P04090	185 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	LPL	P06858	475 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	HMBS	P08397	361 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	ACAA1	P09110	424 aa	Predicted RBP	4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	GSTP1	P09211	210 aa	Known RBP	4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	ZNF806	P0C7X5	589 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	ODC1	P11926	461 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	PRF1	P14222	555 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	SPI1	P17947	270 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	GABRB1	P18505	474 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	PAM	P19021	973 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	LCN1	P31025	176 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	HOXA6	P31267	233 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	ICAM3	P32942	547 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	CD96	P40200	585 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	EVX1	P49640	407 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	ACLY	P53396	1101 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	FOXA1	P55317	472 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	TBX4	P57082	545 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	PLIN5	Q00G26	463 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	PICALM	Q13492	652 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	GTF2H3	Q13889	308 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	PAFAH1B3	Q15102	231 aa	Known RBP	4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	UGCG	Q16739	394 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	HFE	Q30201	348 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	FAM74A3	Q4VXF1	159 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	PLA1A	Q53H76	456 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	XKR7	Q5GH72	579 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	STRIP1	Q5VSL9	837 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	B3GNTL1	Q67FW5	361 aa	Predicted RBP	4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	SLC6A19	Q695T7	634 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	PLAG1	Q6DJT9	500 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	FRMPD2B	Q6IN97	320 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	FUT10	Q6P4F1	479 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	FAM198B	Q6UWH4	519 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	LCLAT1	Q6UWP7	414 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	UNC5D	Q6UXZ4	953 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	GCNT7	Q6ZNI0	430 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	MOB2	Q70IA6	237 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	PGAP1	Q75T13	922 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	NLRC3	Q7RTR2	1065 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	KANSL1	Q7Z3B3	1105 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	CALHM3	Q86XJ0	350 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	ZDHHC17	Q8IUH5	632 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	C12orf45	Q8N5I9	185 aa	Predicted RBP	4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	C19orf47	Q8N9M1	422 aa	Known RBP	4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	PLA2G15	Q8NCC3	412 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	TMIE	Q8NEW7	156 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	ATP6V1C2	Q8NEY4	427 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	DMBX1	Q8NFW5	382 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	OR9Q1	Q8NGQ5	310 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	OR2T11	Q8NH01	316 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	DNAJB8	Q8NHS0	232 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	TMEM163	Q8TC26	289 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	NETO1	Q8TDF5	533 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	OTULIN	Q96BN8	352 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	ATG4C	Q96DT6	458 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	MRPS24	Q96EL2	167 aa	Known RBP	4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	WDR89	Q96FK6	387 aa	Predicted RBP	4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	LRRC46	Q96FV0	321 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	PRMT6	Q96LA8	375 aa	Predicted RBP	4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	ZBTB18	Q99592	522 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	SLC38A3	Q99624	504 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	PAPOLG	Q9BWT3	736 aa	Known RBP	4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	NKX6-2	Q9C056	277 aa	Predicted RBP	4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	ELOVL4	Q9GZR5	314 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	DEFB129	Q9H1M3	183 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	HHATL	Q9HCP6	504 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	ZNF334	Q9HCZ1	680 aa	Predicted RBP	4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	DLL4	Q9NR61	685 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	HEBP1	Q9NRV9	189 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	UFSP2	Q9NUQ7	469 aa		4.56	□□□□□ -1.68

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