RNA–Protein interactions for RNA: ENST00000489741.1

PRPF40A-210, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-210ENST00000489741 TMEM205Q6UW68 189 aa6.02□□□□□ -1.45
PRPF40A-210ENST00000489741 FAM180AQ6UWF9 173 aa6.02□□□□□ -1.45
PRPF40A-210ENST00000489741 PPP1R21Q6ZMI0 780 aa6.02□□□□□ -1.45
PRPF40A-210ENST00000489741 LHFPL2Q6ZUX7 228 aa6.02□□□□□ -1.45
PRPF40A-210ENST00000489741 NDUFAF7Q7L592 441 aa6.02□□□□□ -1.45
PRPF40A-210ENST00000489741 OTOAQ7RTW8 1153 aa6.02□□□□□ -1.45
PRPF40A-210ENST00000489741 PAQR7Q86WK9 346 aa6.02□□□□□ -1.45
PRPF40A-210ENST00000489741 SLC13A5Q86YT5 568 aaPredicted RBP6.02□□□□□ -1.45
PRPF40A-210ENST00000489741 RNF10Q8N5U6 811 aaKnown RBP6.02□□□□□ -1.45
PRPF40A-210ENST00000489741 BCORP1Q8N888 145 aa6.02□□□□□ -1.45
PRPF40A-210ENST00000489741 AMER3Q8N944 861 aa6.02□□□□□ -1.45
PRPF40A-210ENST00000489741 TTC29Q8NA56 475 aaPredicted RBP6.02□□□□□ -1.45
PRPF40A-210ENST00000489741 TSPEARQ8WU66 669 aa6.02□□□□□ -1.45
PRPF40A-210ENST00000489741 C1orf54Q8WWF1 131 aa6.02□□□□□ -1.45
PRPF40A-210ENST00000489741 LPGAT1Q92604 370 aa6.02□□□□□ -1.45
PRPF40A-210ENST00000489741 C8orf44Q96CB5 159 aa6.02□□□□□ -1.45
PRPF40A-210ENST00000489741 MVB12AQ96EY5 273 aa6.02□□□□□ -1.45
PRPF40A-210ENST00000489741 VPS50Q96JG6 964 aa6.02□□□□□ -1.45
PRPF40A-210ENST00000489741 PANX3Q96QZ0 392 aa6.02□□□□□ -1.45
PRPF40A-210ENST00000489741 OR2A5Q96R48 311 aa6.02□□□□□ -1.45
PRPF40A-210ENST00000489741 BAG1Q99933 345 aaPredicted RBP6.02□□□□□ -1.45
PRPF40A-210ENST00000489741 CRB3Q9BUF7 120 aa6.02□□□□□ -1.45
PRPF40A-210ENST00000489741 EPS8L2Q9H6S3 715 aa6.02□□□□□ -1.45
PRPF40A-210ENST00000489741 ZNF160Q9HCG1 818 aa6.02□□□□□ -1.45
PRPF40A-210ENST00000489741 EIF2B3Q9NR50 452 aaKnown RBP6.02□□□□□ -1.45
PRPF40A-210ENST00000489741 SPATA7Q9P0W8 599 aa6.02□□□□□ -1.45
PRPF40A-210ENST00000489741 PAK5Q9P286 719 aa6.02□□□□□ -1.45
PRPF40A-210ENST00000489741 STOX2Q9P2F5 926 aaPredicted RBP6.02□□□□□ -1.45
PRPF40A-210ENST00000489741 GALPQ9UBC7 116 aa6.02□□□□□ -1.45
PRPF40A-210ENST00000489741 ZNF282Q9UDV7 671 aaPredicted RBP6.02□□□□□ -1.45
PRPF40A-210ENST00000489741 GNPTGQ9UJJ9 305 aa6.02□□□□□ -1.45
PRPF40A-210ENST00000489741 C3orf18Q9UK00 162 aa6.02□□□□□ -1.45
PRPF40A-210ENST00000489741 TTC7AQ9ULT0 858 aaPredicted RBP6.02□□□□□ -1.45
PRPF40A-210ENST00000489741 ZNF148Q9UQR1 794 aa6.02□□□□□ -1.45
PRPF40A-210ENST00000489741 MRPS2Q9Y399 296 aaKnown RBP6.02□□□□□ -1.45
PRPF40A-210ENST00000489741 AKAP9Q99996 3911 aa6.02□□□□□ -1.45
PRPF40A-210ENST00000489741 CELSR1Q9NYQ6 3014 aa6.02□□□□□ -1.45
PRPF40A-210ENST00000489741 DOCK10Q96BY6 2186 aa6.01□□□□□ -1.45
PRPF40A-210ENST00000489741 CCDC88CQ9P219 2028 aa6.01□□□□□ -1.45
PRPF40A-210ENST00000489741 HIVEP1P15822 2718 aa6.01□□□□□ -1.45
PRPF40A-210ENST00000489741 CCDC168Q8NDH2 2452 aa6.01□□□□□ -1.45
PRPF40A-210ENST00000489741 SVILO95425 2214 aa6.01□□□□□ -1.45
PRPF40A-210ENST00000489741 IGHV1-45A0A0A0MS14 117 aa6.01□□□□□ -1.45
PRPF40A-210ENST00000489741 TRAV17A0A0B4J275 112 aa6.01□□□□□ -1.45
PRPF40A-210ENST00000489741 ARHGEF33A8MVX0 844 aa6.01□□□□□ -1.45
PRPF40A-210ENST00000489741 IDSB3KWA1 339 aa6.01□□□□□ -1.45
PRPF40A-210ENST00000489741 MYO1CO00159 1063 aa6.01□□□□□ -1.45
PRPF40A-210ENST00000489741 HNRNPRO43390 633 aaKnown RBP6.01□□□□□ -1.45
PRPF40A-210ENST00000489741 ZG16O60844 167 aa6.01□□□□□ -1.45
PRPF40A-210ENST00000489741 PSIP1O75475 530 aaKnown RBP6.01□□□□□ -1.45
PRPF40A-210ENST00000489741 WISP2O76076 250 aa6.01□□□□□ -1.45
PRPF40A-210ENST00000489741 USP1O94782 785 aa6.01□□□□□ -1.45
PRPF40A-210ENST00000489741 VAPBO95292 243 aa6.01□□□□□ -1.45
PRPF40A-210ENST00000489741 BMP10O95393 424 aa6.01□□□□□ -1.45
PRPF40A-210ENST00000489741 IFNB1P01574 187 aa6.01□□□□□ -1.45
PRPF40A-210ENST00000489741 APRTP07741 180 aa6.01□□□□□ -1.45
PRPF40A-210ENST00000489741 ADSLP30566 484 aaPredicted RBP6.01□□□□□ -1.45
PRPF40A-210ENST00000489741 EMP2P54851 167 aa6.01□□□□□ -1.45
PRPF40A-210ENST00000489741 PER3P56645 1201 aa6.01□□□□□ -1.45
PRPF40A-210ENST00000489741 SRSF2Q01130 221 aaKnown RBP6.01□□□□□ -1.45
PRPF40A-210ENST00000489741 OCA2Q04671 838 aa6.01□□□□□ -1.45
PRPF40A-210ENST00000489741 KIF5AQ12840 1032 aa6.01□□□□□ -1.45
PRPF40A-210ENST00000489741 ART3Q13508 389 aa6.01□□□□□ -1.45
PRPF40A-210ENST00000489741 ARHGAP19Q14CB8 494 aa6.01□□□□□ -1.45
PRPF40A-210ENST00000489741 NAA25Q14CX7 972 aa6.01□□□□□ -1.45
PRPF40A-210ENST00000489741 TMED2Q15363 201 aa6.01□□□□□ -1.45
PRPF40A-210ENST00000489741 INAQ16352 499 aa6.01□□□□□ -1.45
PRPF40A-210ENST00000489741 CCNG2Q16589 344 aa6.01□□□□□ -1.45
PRPF40A-210ENST00000489741 TYSND1Q2T9J0 566 aa6.01□□□□□ -1.45
PRPF40A-210ENST00000489741 ANKRD20A4Q4UJ75 823 aa6.01□□□□□ -1.45
PRPF40A-210ENST00000489741 ACSBG2Q5FVE4 666 aa6.01□□□□□ -1.45
PRPF40A-210ENST00000489741 IRAK1BP1Q5VVH5 260 aa6.01□□□□□ -1.45
PRPF40A-210ENST00000489741 GARNL3Q5VVW2 1013 aa6.01□□□□□ -1.45
PRPF40A-210ENST00000489741 ARMC3Q5W041 872 aa6.01□□□□□ -1.45
PRPF40A-210ENST00000489741 PTRHD1Q6GMV3 140 aaKnown RBP6.01□□□□□ -1.45
PRPF40A-210ENST00000489741 C4orf22Q6V702 233 aa6.01□□□□□ -1.45
PRPF40A-210ENST00000489741 CYHR1Q6ZMK1 362 aa6.01□□□□□ -1.45
PRPF40A-210ENST00000489741 LINC00696Q6ZRV3 163 aa6.01□□□□□ -1.45
PRPF40A-210ENST00000489741 CENPUQ71F23 418 aa6.01□□□□□ -1.45
PRPF40A-210ENST00000489741 KIAA1328Q86T90 577 aa6.01□□□□□ -1.45
PRPF40A-210ENST00000489741 METTL27Q8N6F8 245 aaPredicted RBP6.01□□□□□ -1.45
PRPF40A-210ENST00000489741 PPHLN1Q8NEY8 458 aaKnown RBP6.01□□□□□ -1.45
PRPF40A-210ENST00000489741 OR10H5Q8NGA6 315 aa6.01□□□□□ -1.45
PRPF40A-210ENST00000489741 OR1N1Q8NGS0 311 aa6.01□□□□□ -1.45
PRPF40A-210ENST00000489741 OR9A1PQ8NGU1 263 aa6.01□□□□□ -1.45
PRPF40A-210ENST00000489741 MAGEC3Q8TD91 643 aa6.01□□□□□ -1.45
PRPF40A-210ENST00000489741 BRIX1Q8TDN6 353 aaKnown RBP6.01□□□□□ -1.45
PRPF40A-210ENST00000489741 ITLN2Q8WWU7 325 aaPredicted RBP6.01□□□□□ -1.45
PRPF40A-210ENST00000489741 SMPDL3AQ92484 453 aa6.01□□□□□ -1.45
PRPF40A-210ENST00000489741 NR4A3Q92570 626 aa6.01□□□□□ -1.45
PRPF40A-210ENST00000489741 TFAP2CQ92754 450 aa6.01□□□□□ -1.45
PRPF40A-210ENST00000489741 IMMP1LQ96LU5 166 aa6.01□□□□□ -1.45
PRPF40A-210ENST00000489741 DPH7Q9BTV6 452 aa6.01□□□□□ -1.45
PRPF40A-210ENST00000489741 IL22Q9GZX6 179 aa6.01□□□□□ -1.45
PRPF40A-210ENST00000489741 ZNF700Q9H0M5 742 aa6.01□□□□□ -1.45
PRPF40A-210ENST00000489741 OLAHQ9NV23 265 aa6.01□□□□□ -1.45
PRPF40A-210ENST00000489741 C14orf105Q9NVL8 296 aa6.01□□□□□ -1.45
PRPF40A-210ENST00000489741 BFARQ9NZS9 450 aa6.01□□□□□ -1.45
PRPF40A-210ENST00000489741 KLHL42Q9P2K6 505 aa6.01□□□□□ -1.45
PRPF40A-210ENST00000489741 ANAPC5Q9UJX4 755 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms