RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 ANKRD26P1Q6NSI1 321 aa13.4□□□□□ -0.26
VPS26A-205ENST00000489656 TICAM1Q8IUC6 712 aa13.4□□□□□ -0.26
VPS26A-205ENST00000489656 SCUBE1Q8IWY4 988 aa13.4□□□□□ -0.26
VPS26A-205ENST00000489656 ULK2Q8IYT8 1036 aa13.4□□□□□ -0.26
VPS26A-205ENST00000489656 TTC29Q8NA56 475 aaPredicted RBP13.4□□□□□ -0.26
VPS26A-205ENST00000489656 GOT1L1Q8NHS2 421 aaPredicted RBP13.4□□□□□ -0.26
VPS26A-205ENST00000489656 N4BP2L2Q92802 583 aaPredicted RBP13.4□□□□□ -0.26
VPS26A-205ENST00000489656 CGREF1Q99674 301 aa13.4□□□□□ -0.26
VPS26A-205ENST00000489656 MAPKAP1Q9BPZ7 522 aa13.4□□□□□ -0.26
VPS26A-205ENST00000489656 PAIP1Q9H074 479 aaKnown RBP13.4□□□□□ -0.26
VPS26A-205ENST00000489656 ANKHQ9HCJ1 492 aa13.4□□□□□ -0.26
VPS26A-205ENST00000489656 STARD5Q9NSY2 213 aa13.4□□□□□ -0.26
VPS26A-205ENST00000489656 NCDNQ9UBB6 729 aa13.4□□□□□ -0.26
VPS26A-205ENST00000489656 NEUROG3Q9Y4Z2 214 aa13.4□□□□□ -0.26
VPS26A-205ENST00000489656 GMEB1Q9Y692 573 aa13.4□□□□□ -0.26
VPS26A-205ENST00000489656 MUC6Q6W4X9 2439 aa13.39□□□□□ -0.27
VPS26A-205ENST00000489656 HYKKA2RU49 373 aa13.39□□□□□ -0.27
VPS26A-205ENST00000489656 A8MU76 341 aa13.39□□□□□ -0.27
VPS26A-205ENST00000489656 NSA2O95478 260 aaKnown RBP13.39□□□□□ -0.27
VPS26A-205ENST00000489656 AIFM1O95831 613 aa13.39□□□□□ -0.27
VPS26A-205ENST00000489656 ZCCHC18P0CG32 403 aa13.39□□□□□ -0.27
VPS26A-205ENST00000489656 TGM1P22735 817 aa13.39□□□□□ -0.27
VPS26A-205ENST00000489656 BUD31P41223 144 aaPredicted RBP13.39□□□□□ -0.27
VPS26A-205ENST00000489656 LIM2P55344 173 aa13.39□□□□□ -0.27
VPS26A-205ENST00000489656 ITGA1P56199 1179 aa13.39□□□□□ -0.27
VPS26A-205ENST00000489656 ACY1Q03154 408 aa13.39□□□□□ -0.27
VPS26A-205ENST00000489656 ILKQ13418 452 aa13.39□□□□□ -0.27
VPS26A-205ENST00000489656 RUNX2Q13950 521 aa13.39□□□□□ -0.27
VPS26A-205ENST00000489656 SPIDRQ14159 915 aa13.39□□□□□ -0.27
VPS26A-205ENST00000489656 KCNAB1Q14722 419 aa13.39□□□□□ -0.27
VPS26A-205ENST00000489656 MLC1Q15049 377 aa13.39□□□□□ -0.27
VPS26A-205ENST00000489656 GPR19Q15760 415 aa13.39□□□□□ -0.27
VPS26A-205ENST00000489656 PRSS53Q2L4Q9 553 aa13.39□□□□□ -0.27
VPS26A-205ENST00000489656 MPEG1Q2M385 716 aa13.39□□□□□ -0.27
VPS26A-205ENST00000489656 MUM1Q2TAK8 710 aa13.39□□□□□ -0.27
VPS26A-205ENST00000489656 FAM214AQ32MH5 1076 aa13.39□□□□□ -0.27
VPS26A-205ENST00000489656 SAMD4BQ5PRF9 694 aaKnown RBP13.39□□□□□ -0.27
VPS26A-205ENST00000489656 C6orf10Q5SRN2 563 aa13.39□□□□□ -0.27
VPS26A-205ENST00000489656 TLDC1Q6P9B6 456 aa13.39□□□□□ -0.27
VPS26A-205ENST00000489656 PRR23CQ6ZRP0 262 aa13.39□□□□□ -0.27
VPS26A-205ENST00000489656 KIAA2013Q8IYS2 634 aa13.39□□□□□ -0.27
VPS26A-205ENST00000489656 MMP21Q8N119 569 aa13.39□□□□□ -0.27
VPS26A-205ENST00000489656 FBXW8Q8N3Y1 598 aa13.39□□□□□ -0.27
VPS26A-205ENST00000489656 OR8J3Q8NGG0 315 aa13.39□□□□□ -0.27
VPS26A-205ENST00000489656 MARVELD3Q96A59 401 aa13.39□□□□□ -0.27
VPS26A-205ENST00000489656 TMEM125Q96AQ2 219 aa13.39□□□□□ -0.27
VPS26A-205ENST00000489656 ZNF501Q96CX3 271 aaPredicted RBP13.39□□□□□ -0.27
VPS26A-205ENST00000489656 MVB12AQ96EY5 273 aa13.39□□□□□ -0.27
VPS26A-205ENST00000489656 CCDC74BQ96LY2 380 aa13.39□□□□□ -0.27
VPS26A-205ENST00000489656 ANKRD27Q96NW4 1050 aa13.39□□□□□ -0.27
VPS26A-205ENST00000489656 CDRT15Q96T59 188 aa13.39□□□□□ -0.27
VPS26A-205ENST00000489656 CDC6Q99741 560 aa13.39□□□□□ -0.27
VPS26A-205ENST00000489656 SPRTNQ9H040 489 aaPredicted RBP13.39□□□□□ -0.27
VPS26A-205ENST00000489656 FANCEQ9HB96 536 aa13.39□□□□□ -0.27
VPS26A-205ENST00000489656 PARD6AQ9NPB6 346 aa13.39□□□□□ -0.27
VPS26A-205ENST00000489656 RXFP3Q9NSD7 469 aa13.39□□□□□ -0.27
VPS26A-205ENST00000489656 SLAMF8Q9P0V8 285 aa13.39□□□□□ -0.27
VPS26A-205ENST00000489656 FBXW2Q9UKT8 454 aa13.39□□□□□ -0.27
VPS26A-205ENST00000489656 CES1P1Q9UKY3 287 aa13.39□□□□□ -0.27
VPS26A-205ENST00000489656 AP3M1Q9Y2T2 418 aa13.39□□□□□ -0.27
VPS26A-205ENST00000489656 NAALAD2Q9Y3Q0 740 aa13.39□□□□□ -0.27
VPS26A-205ENST00000489656 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.39□□□□□ -0.27
VPS26A-205ENST00000489656 SPACA6W5XKT8 324 aa13.39□□□□□ -0.27
VPS26A-205ENST00000489656 TMEM150CB9EJG8 249 aa13.38□□□□□ -0.27
VPS26A-205ENST00000489656 H0YIG0 161 aa13.38□□□□□ -0.27
VPS26A-205ENST00000489656 RFXANKO14593 260 aa13.38□□□□□ -0.27
VPS26A-205ENST00000489656 PDPK1O15530 556 aa13.38□□□□□ -0.27
VPS26A-205ENST00000489656 FOXS1O43638 330 aa13.38□□□□□ -0.27
VPS26A-205ENST00000489656 OR2B3O76000 313 aa13.38□□□□□ -0.27
VPS26A-205ENST00000489656 MED26O95402 600 aa13.38□□□□□ -0.27
VPS26A-205ENST00000489656 SLC34A2O95436 690 aa13.38□□□□□ -0.27
VPS26A-205ENST00000489656 NR2F6P10588 404 aa13.38□□□□□ -0.27
VPS26A-205ENST00000489656 FOLR1P15328 257 aa13.38□□□□□ -0.27
VPS26A-205ENST00000489656 IL1RNP18510 177 aa13.38□□□□□ -0.27
VPS26A-205ENST00000489656 ALDH9A1P49189 494 aa13.38□□□□□ -0.27
VPS26A-205ENST00000489656 SLC7A2P52569 658 aa13.38□□□□□ -0.27
VPS26A-205ENST00000489656 PCBP4P57723 403 aaKnown RBP13.38□□□□□ -0.27
VPS26A-205ENST00000489656 ZFP36L1Q07352 338 aaKnown RBP13.38□□□□□ -0.27
VPS26A-205ENST00000489656 CAPRIN1Q14444 709 aaKnown RBP13.38□□□□□ -0.27
VPS26A-205ENST00000489656 CEBPEQ15744 281 aa13.38□□□□□ -0.27
VPS26A-205ENST00000489656 RUNDC3AQ59EK9 446 aa13.38□□□□□ -0.27
VPS26A-205ENST00000489656 NANOGP8Q6NSW7 305 aa13.38□□□□□ -0.27
VPS26A-205ENST00000489656 SLC48A1Q6P1K1 146 aa13.38□□□□□ -0.27
VPS26A-205ENST00000489656 PRSS41Q7RTY9 318 aa13.38□□□□□ -0.27
VPS26A-205ENST00000489656 ANKRD46Q86W74 232 aa13.38□□□□□ -0.27
VPS26A-205ENST00000489656 MSRB3Q8IXL7 192 aa13.38□□□□□ -0.27
VPS26A-205ENST00000489656 SLC15A3Q8IY34 581 aa13.38□□□□□ -0.27
VPS26A-205ENST00000489656 CA13Q8N1Q1 262 aa13.38□□□□□ -0.27
VPS26A-205ENST00000489656 OR1L3Q8NH93 324 aa13.38□□□□□ -0.27
VPS26A-205ENST00000489656 ADAMTS18Q8TE60 1221 aa13.38□□□□□ -0.27
VPS26A-205ENST00000489656 MIEF2Q96C03 454 aa13.38□□□□□ -0.27
VPS26A-205ENST00000489656 CLPTM1LQ96KA5 538 aa13.38□□□□□ -0.27
VPS26A-205ENST00000489656 SLC39A3Q9BRY0 314 aa13.38□□□□□ -0.27
VPS26A-205ENST00000489656 INPP5KQ9BT40 448 aa13.38□□□□□ -0.27
VPS26A-205ENST00000489656 NANOGQ9H9S0 305 aa13.38□□□□□ -0.27
VPS26A-205ENST00000489656 IL1RL2Q9HB29 575 aa13.38□□□□□ -0.27
VPS26A-205ENST00000489656 ACSS1Q9NUB1 689 aaPredicted RBP13.38□□□□□ -0.27
VPS26A-205ENST00000489656 SIDT1Q9NXL6 827 aaKnown RBP13.38□□□□□ -0.27
VPS26A-205ENST00000489656 SLC25A37Q9NYZ2 338 aa13.38□□□□□ -0.27
VPS26A-205ENST00000489656 VAPAQ9P0L0 249 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms