RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 SOX11P35716 441 aa16.26■□□□□ 0.19
MDC1-206ENST00000489540 HNRNPFP52597 415 aaKnown RBP16.26■□□□□ 0.19
MDC1-206ENST00000489540 NAGLUP54802 743 aa16.26■□□□□ 0.19
MDC1-206ENST00000489540 SLC26A5P58743 744 aa16.26■□□□□ 0.19
MDC1-206ENST00000489540 ZNF33BQ06732 778 aa16.26■□□□□ 0.19
MDC1-206ENST00000489540 STX4Q12846 297 aa16.26■□□□□ 0.19
MDC1-206ENST00000489540 TERF2Q15554 542 aa16.26■□□□□ 0.19
MDC1-206ENST00000489540 SLC6A19Q695T7 634 aa16.26■□□□□ 0.19
MDC1-206ENST00000489540 LINC00696Q6ZRV3 163 aa16.26■□□□□ 0.19
MDC1-206ENST00000489540 PAGE2Q7Z2X7 111 aa16.26■□□□□ 0.19
MDC1-206ENST00000489540 NUDT13Q86X67 352 aa16.26■□□□□ 0.19
MDC1-206ENST00000489540 SIRT6Q8N6T7 355 aa16.26■□□□□ 0.19
MDC1-206ENST00000489540 CDYL2Q8N8U2 506 aa16.26■□□□□ 0.19
MDC1-206ENST00000489540 TMEM52Q8NDY8 209 aa16.26■□□□□ 0.19
MDC1-206ENST00000489540 METTL6Q8TCB7 284 aa16.26■□□□□ 0.19
MDC1-206ENST00000489540 ZNF717Q9BY31 904 aaPredicted RBP16.26■□□□□ 0.19
MDC1-206ENST00000489540 EPN3Q9H201 632 aa16.26■□□□□ 0.19
MDC1-206ENST00000489540 GSTO2Q9H4Y5 243 aa16.26■□□□□ 0.19
MDC1-206ENST00000489540 KCNK13Q9HB14 408 aa16.26■□□□□ 0.19
MDC1-206ENST00000489540 SLAMF7Q9NQ25 335 aa16.26■□□□□ 0.19
MDC1-206ENST00000489540 SENP1Q9P0U3 644 aa16.26■□□□□ 0.19
MDC1-206ENST00000489540 ADAM29Q9UKF5 820 aa16.26■□□□□ 0.19
MDC1-206ENST00000489540 A0A0A6YYD5 115 aa16.25■□□□□ 0.19
MDC1-206ENST00000489540 SAGE2PA6NJ88 616 aa16.25■□□□□ 0.19
MDC1-206ENST00000489540 TTLL8A6PVC2 850 aa16.25■□□□□ 0.19
MDC1-206ENST00000489540 MANBAO00462 879 aa16.25■□□□□ 0.19
MDC1-206ENST00000489540 ULK1O75385 1050 aa16.25■□□□□ 0.19
MDC1-206ENST00000489540 ERLIN1O75477 346 aa16.25■□□□□ 0.19
MDC1-206ENST00000489540 ESRRBO95718 433 aa16.25■□□□□ 0.19
MDC1-206ENST00000489540 PDYNP01213 254 aa16.25■□□□□ 0.19
MDC1-206ENST00000489540 HSD3B1P14060 373 aa16.25■□□□□ 0.19
MDC1-206ENST00000489540 HSD3B2P26439 372 aa16.25■□□□□ 0.19
MDC1-206ENST00000489540 TLE1Q04724 770 aa16.25■□□□□ 0.19
MDC1-206ENST00000489540 ZNF844Q08AG5 666 aa16.25■□□□□ 0.19
MDC1-206ENST00000489540 BIKQ13323 160 aa16.25■□□□□ 0.19
MDC1-206ENST00000489540 SERTAD2Q14140 314 aa16.25■□□□□ 0.19
MDC1-206ENST00000489540 KRT71Q3SY84 523 aa16.25■□□□□ 0.19
MDC1-206ENST00000489540 ABHD17BQ5VST6 288 aa16.25■□□□□ 0.19
MDC1-206ENST00000489540 LIPMQ5VYY2 423 aa16.25■□□□□ 0.19
MDC1-206ENST00000489540 MRM1Q6IN84 353 aaKnown RBP16.25■□□□□ 0.19
MDC1-206ENST00000489540 H3F3CQ6NXT2 135 aa16.25■□□□□ 0.19
MDC1-206ENST00000489540 CYP20A1Q6UW02 462 aa16.25■□□□□ 0.19
MDC1-206ENST00000489540 Q6ZS92 163 aa16.25■□□□□ 0.19
MDC1-206ENST00000489540 CROCCP2Q86T23 111 aa16.25■□□□□ 0.19
MDC1-206ENST00000489540 IQCKQ8N0W5 287 aa16.25■□□□□ 0.19
MDC1-206ENST00000489540 DNAJB14Q8TBM8 379 aa16.25■□□□□ 0.19
MDC1-206ENST00000489540 TANKQ92844 425 aa16.25■□□□□ 0.19
MDC1-206ENST00000489540 ZNF354BQ96LW1 612 aa16.25■□□□□ 0.19
MDC1-206ENST00000489540 C12orf65Q9H3J6 166 aaKnown RBP16.25■□□□□ 0.19
MDC1-206ENST00000489540 RPF2Q9H7B2 306 aaKnown RBP16.25■□□□□ 0.19
MDC1-206ENST00000489540 PNO1Q9NRX1 252 aaKnown RBP16.25■□□□□ 0.19
MDC1-206ENST00000489540 FARSBQ9NSD9 589 aaKnown RBP16.25■□□□□ 0.19
MDC1-206ENST00000489540 STMN3Q9NZ72 180 aa16.25■□□□□ 0.19
MDC1-206ENST00000489540 CLDN16Q9Y5I7 305 aa16.25■□□□□ 0.19
MDC1-206ENST00000489540 ZNF462Q96JM2 2506 aa16.25■□□□□ 0.19
MDC1-206ENST00000489540 BSNQ9UPA5 3926 aa16.24■□□□□ 0.19
MDC1-206ENST00000489540 DYTNA2CJ06 578 aa16.24■□□□□ 0.19
MDC1-206ENST00000489540 A8MUI8 341 aa16.24■□□□□ 0.19
MDC1-206ENST00000489540 J3QKU1 62 aa16.24■□□□□ 0.19
MDC1-206ENST00000489540 RGS16O15492 202 aaPredicted RBP16.24■□□□□ 0.19
MDC1-206ENST00000489540 PROM1O43490 865 aa16.24■□□□□ 0.19
MDC1-206ENST00000489540 EEDO75530 441 aaKnown RBP16.24■□□□□ 0.19
MDC1-206ENST00000489540 FAM58BPP0C7Q3 252 aa16.24■□□□□ 0.19
MDC1-206ENST00000489540 HMOX2P30519 316 aa16.24■□□□□ 0.19
MDC1-206ENST00000489540 BUD31P41223 144 aaPredicted RBP16.24■□□□□ 0.19
MDC1-206ENST00000489540 CD97P48960 835 aa16.24■□□□□ 0.19
MDC1-206ENST00000489540 TAS2R50P59544 299 aa16.24■□□□□ 0.19
MDC1-206ENST00000489540 ASPHQ12797 758 aa16.24■□□□□ 0.19
MDC1-206ENST00000489540 PLEKHN1Q494U1 663 aaPredicted RBP16.24■□□□□ 0.19
MDC1-206ENST00000489540 COLEC12Q5KU26 742 aa16.24■□□□□ 0.19
MDC1-206ENST00000489540 CLNKQ7Z7G1 428 aa16.24■□□□□ 0.19
MDC1-206ENST00000489540 METTL4Q8N3J2 472 aa16.24■□□□□ 0.19
MDC1-206ENST00000489540 EFCAB3Q8N7B9 438 aa16.24■□□□□ 0.19
MDC1-206ENST00000489540 GBP7Q8N8V2 638 aaPredicted RBP16.24■□□□□ 0.19
MDC1-206ENST00000489540 ELP5Q8TE02 316 aa16.24■□□□□ 0.19
MDC1-206ENST00000489540 HAS2Q92819 552 aa16.24■□□□□ 0.19
MDC1-206ENST00000489540 ALOXE3Q9BYJ1 711 aa16.24■□□□□ 0.19
MDC1-206ENST00000489540 MID1IP1Q9NPA3 183 aa16.24■□□□□ 0.19
MDC1-206ENST00000489540 ADAP2Q9NPF8 381 aa16.24■□□□□ 0.19
MDC1-206ENST00000489540 VTI1BQ9UEU0 232 aa16.24■□□□□ 0.19
MDC1-206ENST00000489540 SLC12A4Q9UP95 1085 aa16.24■□□□□ 0.19
MDC1-206ENST00000489540 ATG4BQ9Y4P1 393 aa16.24■□□□□ 0.19
MDC1-206ENST00000489540 ASB4Q9Y574 426 aa16.24■□□□□ 0.19
MDC1-206ENST00000489540 CFAP46Q8IYW2 2715 aa16.23■□□□□ 0.19
MDC1-206ENST00000489540 ARHGAP10A1A4S6 786 aa16.23■□□□□ 0.19
MDC1-206ENST00000489540 A8MUA0 341 aa16.23■□□□□ 0.19
MDC1-206ENST00000489540 TRIM13O60858 407 aa16.23■□□□□ 0.19
MDC1-206ENST00000489540 SORBS2O94875 1100 aaKnown RBP16.23■□□□□ 0.19
MDC1-206ENST00000489540 IFNA16P05015 189 aa16.23■□□□□ 0.19
MDC1-206ENST00000489540 KLK1P06870 262 aa16.23■□□□□ 0.19
MDC1-206ENST00000489540 PPP2R1BP30154 601 aa16.23■□□□□ 0.19
MDC1-206ENST00000489540 ARG2P78540 354 aa16.23■□□□□ 0.19
MDC1-206ENST00000489540 TNFRSF17Q02223 184 aa16.23■□□□□ 0.19
MDC1-206ENST00000489540 CSTF3Q12996 717 aaKnown RBP16.23■□□□□ 0.19
MDC1-206ENST00000489540 TLR1Q15399 786 aa16.23■□□□□ 0.19
MDC1-206ENST00000489540 B3GNTL1Q67FW5 361 aaPredicted RBP16.23■□□□□ 0.19
MDC1-206ENST00000489540 FRMD7Q6ZUT3 714 aa16.23■□□□□ 0.19
MDC1-206ENST00000489540 C10orf107Q8IVU9 208 aa16.23■□□□□ 0.19
MDC1-206ENST00000489540 TMEM132CQ8N3T6 1108 aa16.23■□□□□ 0.19
MDC1-206ENST00000489540 SLC5A8Q8N695 610 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms