RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 MINDY2Q8NBR6 621 aa3.76□□□□□ -1.81
XRN1-213ENST00000489241 GPRC5AQ8NFJ5 357 aa3.76□□□□□ -1.81
XRN1-213ENST00000489241 DQX1Q8TE96 717 aaKnown RBP3.76□□□□□ -1.81
XRN1-213ENST00000489241 CASP10Q92851 521 aa3.76□□□□□ -1.81
XRN1-213ENST00000489241 RAB39BQ96DA2 213 aa3.76□□□□□ -1.81
XRN1-213ENST00000489241 GIMAP5Q96F15 307 aa3.76□□□□□ -1.81
XRN1-213ENST00000489241 C2orf48Q96LS8 159 aa3.76□□□□□ -1.81
XRN1-213ENST00000489241 NECTIN4Q96NY8 510 aa3.76□□□□□ -1.81
XRN1-213ENST00000489241 DUX3Q96PT4 197 aa3.76□□□□□ -1.81
XRN1-213ENST00000489241 ERGIC2Q96RQ1 377 aa3.76□□□□□ -1.81
XRN1-213ENST00000489241 PCDHB18PQ96TA0 734 aa3.76□□□□□ -1.81
XRN1-213ENST00000489241 IL12RB2Q99665 862 aa3.76□□□□□ -1.81
XRN1-213ENST00000489241 NKX3-1Q99801 234 aaPredicted RBP3.76□□□□□ -1.81
XRN1-213ENST00000489241 AGPAT1Q99943 283 aa3.76□□□□□ -1.81
XRN1-213ENST00000489241 FTHL17Q9BXU8 183 aa3.76□□□□□ -1.81
XRN1-213ENST00000489241 COQ10BQ9H8M1 238 aa3.76□□□□□ -1.81
XRN1-213ENST00000489241 ECT2Q9H8V3 914 aa3.76□□□□□ -1.81
XRN1-213ENST00000489241 VIPAS39Q9H9C1 493 aa3.76□□□□□ -1.81
XRN1-213ENST00000489241 HOMER3Q9NSC5 361 aa3.76□□□□□ -1.81
XRN1-213ENST00000489241 MAN2C1Q9NTJ4 1040 aa3.76□□□□□ -1.81
XRN1-213ENST00000489241 SLC35D1Q9NTN3 355 aa3.76□□□□□ -1.81
XRN1-213ENST00000489241 PLEK2Q9NYT0 353 aa3.76□□□□□ -1.81
XRN1-213ENST00000489241 ZNF319Q9P2F9 582 aa3.76□□□□□ -1.81
XRN1-213ENST00000489241 ZNF624Q9P2J8 865 aaPredicted RBP3.76□□□□□ -1.81
XRN1-213ENST00000489241 ANKMY1Q9P2S6 941 aa3.76□□□□□ -1.81
XRN1-213ENST00000489241 DBF4Q9UBU7 674 aaPredicted RBP3.76□□□□□ -1.81
XRN1-213ENST00000489241 EPHA6Q9UF33 1036 aa3.76□□□□□ -1.81
XRN1-213ENST00000489241 ERRFI1Q9UJM3 462 aaPredicted RBP3.76□□□□□ -1.81
XRN1-213ENST00000489241 ENTPD4Q9Y227 616 aa3.76□□□□□ -1.81
XRN1-213ENST00000489241 DISP3Q9P2K9 1392 aa3.76□□□□□ -1.81
XRN1-213ENST00000489241 KIAA1210Q9ULL0 1709 aa3.75□□□□□ -1.81
XRN1-213ENST00000489241 CHEK1O14757 476 aa3.75□□□□□ -1.81
XRN1-213ENST00000489241 ECE2O60344 883 aa3.75□□□□□ -1.81
XRN1-213ENST00000489241 PEX11AO75192 247 aa3.75□□□□□ -1.81
XRN1-213ENST00000489241 LRCH4O75427 683 aa3.75□□□□□ -1.81
XRN1-213ENST00000489241 TRMUO75648 421 aaKnown RBP3.75□□□□□ -1.81
XRN1-213ENST00000489241 CDC123O75794 336 aaPredicted RBP3.75□□□□□ -1.81
XRN1-213ENST00000489241 SYNGR4O95473 234 aa3.75□□□□□ -1.81
XRN1-213ENST00000489241 SERPINF2P08697 491 aa3.75□□□□□ -1.81
XRN1-213ENST00000489241 GPX3P22352 226 aa3.75□□□□□ -1.81
XRN1-213ENST00000489241 AADACP22760 399 aa3.75□□□□□ -1.81
XRN1-213ENST00000489241 MDH1P40925 334 aaKnown RBP3.75□□□□□ -1.81
XRN1-213ENST00000489241 SOX3P41225 446 aa3.75□□□□□ -1.81
XRN1-213ENST00000489241 MAGEA4P43358 317 aa3.75□□□□□ -1.81
XRN1-213ENST00000489241 GEMP55040 296 aa3.75□□□□□ -1.81
XRN1-213ENST00000489241 NLRP11P59045 1033 aaKnown RBP3.75□□□□□ -1.81
XRN1-213ENST00000489241 CSNK2BP67870 215 aa3.75□□□□□ -1.81
XRN1-213ENST00000489241 GABPB1Q06547 395 aaPredicted RBP3.75□□□□□ -1.81
XRN1-213ENST00000489241 MFGE8Q08431 387 aaPredicted RBP3.75□□□□□ -1.81
XRN1-213ENST00000489241 SCGB2A2Q13296 93 aa3.75□□□□□ -1.81
XRN1-213ENST00000489241 OR1C1Q15619 314 aa3.75□□□□□ -1.81
XRN1-213ENST00000489241 GPAT3Q53EU6 434 aa3.75□□□□□ -1.81
XRN1-213ENST00000489241 CMPK2Q5EBM0 449 aa3.75□□□□□ -1.81
XRN1-213ENST00000489241 ATP1A1-AS1Q5TC04 95 aa3.75□□□□□ -1.81
XRN1-213ENST00000489241 ARHGEF16Q5VV41 709 aa3.75□□□□□ -1.81
XRN1-213ENST00000489241 CAPN13Q6MZZ7 669 aaPredicted RBP3.75□□□□□ -1.81
XRN1-213ENST00000489241 CDHR3Q6ZTQ4 885 aa3.75□□□□□ -1.81
XRN1-213ENST00000489241 SH2D5Q6ZV89 423 aa3.75□□□□□ -1.81
XRN1-213ENST00000489241 RFPL4BQ6ZWI9 263 aa3.75□□□□□ -1.81
XRN1-213ENST00000489241 BNIPLQ7Z465 357 aa3.75□□□□□ -1.81
XRN1-213ENST00000489241 AMZ2Q86W34 360 aa3.75□□□□□ -1.81
XRN1-213ENST00000489241 NIPA2Q8N8Q9 360 aa3.75□□□□□ -1.81
XRN1-213ENST00000489241 FAM71CQ8NEG0 241 aa3.75□□□□□ -1.81
XRN1-213ENST00000489241 IPMKQ8NFU5 416 aa3.75□□□□□ -1.81
XRN1-213ENST00000489241 GPR148Q8TDV2 347 aa3.75□□□□□ -1.81
XRN1-213ENST00000489241 GATAD1Q8WUU5 269 aa3.75□□□□□ -1.81
XRN1-213ENST00000489241 SUSD6Q92537 303 aa3.75□□□□□ -1.81
XRN1-213ENST00000489241 ZNF524Q96C55 264 aa3.75□□□□□ -1.81
XRN1-213ENST00000489241 LURAP1Q96LR2 239 aa3.75□□□□□ -1.81
XRN1-213ENST00000489241 JPH2Q9BR39 696 aaPredicted RBP3.75□□□□□ -1.81
XRN1-213ENST00000489241 FUNDC2Q9BWH2 189 aa3.75□□□□□ -1.81
XRN1-213ENST00000489241 TDRD1Q9BXT4 1180 aaKnown RBP3.75□□□□□ -1.81
XRN1-213ENST00000489241 TMEM231Q9H6L2 316 aa3.75□□□□□ -1.81
XRN1-213ENST00000489241 SLC52A3Q9NQ40 469 aa3.75□□□□□ -1.81
XRN1-213ENST00000489241 TECRQ9NZ01 308 aaKnown RBP3.75□□□□□ -1.81
XRN1-213ENST00000489241 C2CD2Q9Y426 696 aa3.75□□□□□ -1.81
XRN1-213ENST00000489241 STK36Q9NRP7 1315 aa3.74□□□□□ -1.81
XRN1-213ENST00000489241 SH3PXD2BA1X283 911 aa3.74□□□□□ -1.81
XRN1-213ENST00000489241 NKX6-3A6NJ46 265 aa3.74□□□□□ -1.81
XRN1-213ENST00000489241 LMO7DNF2Z398 122 aa3.74□□□□□ -1.81
XRN1-213ENST00000489241 BLOC1S5-TXNDC5H3BN57 136 aa3.74□□□□□ -1.81
XRN1-213ENST00000489241 AK1P00568 194 aa3.74□□□□□ -1.81
XRN1-213ENST00000489241 CALCAP01258 141 aa3.74□□□□□ -1.81
XRN1-213ENST00000489241 PROS1P07225 676 aa3.74□□□□□ -1.81
XRN1-213ENST00000489241 CD48P09326 243 aa3.74□□□□□ -1.81
XRN1-213ENST00000489241 FAM200BP0CF97 657 aa3.74□□□□□ -1.81
XRN1-213ENST00000489241 TPBGLP0DKB5 382 aa3.74□□□□□ -1.81
XRN1-213ENST00000489241 PRKAR1AP10644 381 aa3.74□□□□□ -1.81
XRN1-213ENST00000489241 GNSP15586 552 aa3.74□□□□□ -1.81
XRN1-213ENST00000489241 LEPRP48357 1165 aaKnown RBP3.74□□□□□ -1.81
XRN1-213ENST00000489241 TRA2BP62995 288 aaKnown RBP3.74□□□□□ -1.81
XRN1-213ENST00000489241 PMP22Q01453 160 aa3.74□□□□□ -1.81
XRN1-213ENST00000489241 FUT7Q11130 342 aa3.74□□□□□ -1.81
XRN1-213ENST00000489241 PDIA5Q14554 519 aa3.74□□□□□ -1.81
XRN1-213ENST00000489241 MEF2DQ14814 521 aa3.74□□□□□ -1.81
XRN1-213ENST00000489241 NCAPD2Q15021 1401 aa3.74□□□□□ -1.81
XRN1-213ENST00000489241 C3AR1Q16581 482 aa3.74□□□□□ -1.81
XRN1-213ENST00000489241 ANKDD1AQ495B1 522 aa3.74□□□□□ -1.81
XRN1-213ENST00000489241 GTDC1Q4AE62 458 aa3.74□□□□□ -1.81
XRN1-213ENST00000489241 FAM106AQ4KMX7 169 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms