RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 A0A1B0GUH1 482 aa8.53□□□□□ -1.04
HDAC6-232ENST00000489053 CCDC151A5D8V7 595 aa8.53□□□□□ -1.04
HDAC6-232ENST00000489053 C17orf105B2RV13 164 aa8.53□□□□□ -1.04
HDAC6-232ENST00000489053 C4orf51C9J302 202 aa8.53□□□□□ -1.04
HDAC6-232ENST00000489053 H0YIV9 168 aa8.53□□□□□ -1.04
HDAC6-232ENST00000489053 STX16-NPEPL1H3BU86 382 aa8.53□□□□□ -1.04
HDAC6-232ENST00000489053 STX16O14662 325 aa8.53□□□□□ -1.04
HDAC6-232ENST00000489053 LRRTM2O43300 516 aa8.53□□□□□ -1.04
HDAC6-232ENST00000489053 GUCY1B2O75343 617 aa8.53□□□□□ -1.04
HDAC6-232ENST00000489053 UNC5CO95185 931 aa8.53□□□□□ -1.04
HDAC6-232ENST00000489053 SIX3O95343 332 aaPredicted RBP8.53□□□□□ -1.04
HDAC6-232ENST00000489053 OTCP00480 354 aa8.53□□□□□ -1.04
HDAC6-232ENST00000489053 GP1BBP13224 206 aa8.53□□□□□ -1.04
HDAC6-232ENST00000489053 CD22P20273 847 aa8.53□□□□□ -1.04
HDAC6-232ENST00000489053 TPP2P29144 1249 aaPredicted RBP8.53□□□□□ -1.04
HDAC6-232ENST00000489053 CD96P40200 585 aa8.53□□□□□ -1.04
HDAC6-232ENST00000489053 RPS13P62277 151 aaKnown RBP8.53□□□□□ -1.04
HDAC6-232ENST00000489053 ALDH6A1Q02252 535 aaKnown RBP8.53□□□□□ -1.04
HDAC6-232ENST00000489053 ZRSR2Q15696 482 aaKnown RBP8.53□□□□□ -1.04
HDAC6-232ENST00000489053 SGO1Q5FBB7 561 aa8.53□□□□□ -1.04
HDAC6-232ENST00000489053 DEPDC1Q5TB30 811 aa8.53□□□□□ -1.04
HDAC6-232ENST00000489053 SPINK14Q6IE38 97 aa8.53□□□□□ -1.04
HDAC6-232ENST00000489053 SLC25A25Q6KCM7 469 aa8.53□□□□□ -1.04
HDAC6-232ENST00000489053 HSDL2Q6YN16 418 aa8.53□□□□□ -1.04
HDAC6-232ENST00000489053 VN1R5Q7Z5H4 357 aa8.53□□□□□ -1.04
HDAC6-232ENST00000489053 MILR1Q7Z6M3 343 aa8.53□□□□□ -1.04
HDAC6-232ENST00000489053 GPR180Q86V85 440 aa8.53□□□□□ -1.04
HDAC6-232ENST00000489053 LCA5Q86VQ0 697 aa8.53□□□□□ -1.04
HDAC6-232ENST00000489053 SCUBE1Q8IWY4 988 aa8.53□□□□□ -1.04
HDAC6-232ENST00000489053 SHISA5Q8N114 240 aa8.53□□□□□ -1.04
HDAC6-232ENST00000489053 CYP4Z2PQ8N1L4 340 aa8.53□□□□□ -1.04
HDAC6-232ENST00000489053 OR5L2Q8NGL0 311 aa8.53□□□□□ -1.04
HDAC6-232ENST00000489053 ELP5Q8TE02 316 aa8.53□□□□□ -1.04
HDAC6-232ENST00000489053 DCAKDQ8WVC6 231 aa8.53□□□□□ -1.04
HDAC6-232ENST00000489053 UBLCP1Q8WVY7 318 aaPredicted RBP8.53□□□□□ -1.04
HDAC6-232ENST00000489053 ASB15Q8WXK1 588 aa8.53□□□□□ -1.04
HDAC6-232ENST00000489053 NR4A3Q92570 626 aa8.53□□□□□ -1.04
HDAC6-232ENST00000489053 TANKQ92844 425 aa8.53□□□□□ -1.04
HDAC6-232ENST00000489053 NCLNQ969V3 563 aa8.53□□□□□ -1.04
HDAC6-232ENST00000489053 MTFMTQ96DP5 389 aaKnown RBP8.53□□□□□ -1.04
HDAC6-232ENST00000489053 ART5Q96L15 291 aa8.53□□□□□ -1.04
HDAC6-232ENST00000489053 QRFPRQ96P65 431 aa8.53□□□□□ -1.04
HDAC6-232ENST00000489053 MAPKAP1Q9BPZ7 522 aa8.53□□□□□ -1.04
HDAC6-232ENST00000489053 PELOQ9BRX2 385 aaKnown RBP8.53□□□□□ -1.04
HDAC6-232ENST00000489053 TIMMDC1Q9NPL8 285 aa8.53□□□□□ -1.04
HDAC6-232ENST00000489053 SEMA4BQ9NPR2 832 aaPredicted RBP8.53□□□□□ -1.04
HDAC6-232ENST00000489053 SNX6Q9UNH7 406 aa8.53□□□□□ -1.04
HDAC6-232ENST00000489053 NTNG1Q9Y2I2 539 aa8.53□□□□□ -1.04
HDAC6-232ENST00000489053 RNF11Q9Y3C5 154 aa8.53□□□□□ -1.04
HDAC6-232ENST00000489053 MDC1Q14676 2089 aaKnown RBP8.53□□□□□ -1.04
HDAC6-232ENST00000489053 NOTCH2Q04721 2471 aa8.53□□□□□ -1.04
HDAC6-232ENST00000489053 DOPEY1Q5JWR5 2465 aa8.53□□□□□ -1.04
HDAC6-232ENST00000489053 NAV2Q8IVL1 2488 aa8.53□□□□□ -1.04
HDAC6-232ENST00000489053 A1L4Q6 167 aa8.52□□□□□ -1.05
HDAC6-232ENST00000489053 HMX2A2RU54 273 aa8.52□□□□□ -1.05
HDAC6-232ENST00000489053 A8MVJ9 347 aa8.52□□□□□ -1.05
HDAC6-232ENST00000489053 KLRC4-KLRK1H3BQV0 150 aa8.52□□□□□ -1.05
HDAC6-232ENST00000489053 TFECO14948 347 aaPredicted RBP8.52□□□□□ -1.05
HDAC6-232ENST00000489053 RIPK2O43353 540 aa8.52□□□□□ -1.05
HDAC6-232ENST00000489053 KLK8O60259 260 aa8.52□□□□□ -1.05
HDAC6-232ENST00000489053 PRAMEF4O60810 478 aa8.52□□□□□ -1.05
HDAC6-232ENST00000489053 LDB3O75112 727 aa8.52□□□□□ -1.05
HDAC6-232ENST00000489053 SEMA7AO75326 666 aa8.52□□□□□ -1.05
HDAC6-232ENST00000489053 CRCPO75575 148 aa8.52□□□□□ -1.05
HDAC6-232ENST00000489053 ITGA10O75578 1167 aa8.52□□□□□ -1.05
HDAC6-232ENST00000489053 SP1P08047 785 aa8.52□□□□□ -1.05
HDAC6-232ENST00000489053 NR2F6P10588 404 aa8.52□□□□□ -1.05
HDAC6-232ENST00000489053 ESRRAP11474 423 aaPredicted RBP8.52□□□□□ -1.05
HDAC6-232ENST00000489053 MTHFD2P13995 350 aa8.52□□□□□ -1.05
HDAC6-232ENST00000489053 ZNF24P17028 368 aa8.52□□□□□ -1.05
HDAC6-232ENST00000489053 KRT15P19012 456 aa8.52□□□□□ -1.05
HDAC6-232ENST00000489053 EPORP19235 508 aa8.52□□□□□ -1.05
HDAC6-232ENST00000489053 ST13P50502 369 aaKnown RBP8.52□□□□□ -1.05
HDAC6-232ENST00000489053 HLCSP50747 726 aa8.52□□□□□ -1.05
HDAC6-232ENST00000489053 NEK2P51955 445 aa8.52□□□□□ -1.05
HDAC6-232ENST00000489053 ARFIP1P53367 373 aa8.52□□□□□ -1.05
HDAC6-232ENST00000489053 KCNK10P57789 538 aa8.52□□□□□ -1.05
HDAC6-232ENST00000489053 MLF1P58340 268 aa8.52□□□□□ -1.05
HDAC6-232ENST00000489053 ID2Q02363 134 aa8.52□□□□□ -1.05
HDAC6-232ENST00000489053 BIKQ13323 160 aa8.52□□□□□ -1.05
HDAC6-232ENST00000489053 CUL3Q13618 768 aa8.52□□□□□ -1.05
HDAC6-232ENST00000489053 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.52□□□□□ -1.05
HDAC6-232ENST00000489053 C4orf17Q53FE4 359 aa8.52□□□□□ -1.05
HDAC6-232ENST00000489053 PRAMEF9Q5VWM5 478 aa8.52□□□□□ -1.05
HDAC6-232ENST00000489053 FRG2Q64ET8 278 aa8.52□□□□□ -1.05
HDAC6-232ENST00000489053 H3F3CQ6NXT2 135 aa8.52□□□□□ -1.05
HDAC6-232ENST00000489053 MTFR2Q6P444 385 aa8.52□□□□□ -1.05
HDAC6-232ENST00000489053 GALNTL5Q7Z4T8 443 aa8.52□□□□□ -1.05
HDAC6-232ENST00000489053 PLD6Q8N2A8 252 aaKnown RBP8.52□□□□□ -1.05
HDAC6-232ENST00000489053 CCDC63Q8NA47 563 aa8.52□□□□□ -1.05
HDAC6-232ENST00000489053 MORN4Q8NDC4 146 aa8.52□□□□□ -1.05
HDAC6-232ENST00000489053 SREK1Q8WXA9 508 aaKnown RBP8.52□□□□□ -1.05
HDAC6-232ENST00000489053 ISL2Q96A47 359 aa8.52□□□□□ -1.05
HDAC6-232ENST00000489053 FRG2BQ96QU4 278 aa8.52□□□□□ -1.05
HDAC6-232ENST00000489053 CSF3RQ99062 836 aa8.52□□□□□ -1.05
HDAC6-232ENST00000489053 SLX1AQ9BQ83 275 aa8.52□□□□□ -1.05
HDAC6-232ENST00000489053 CNPPD1Q9BV87 410 aa8.52□□□□□ -1.05
HDAC6-232ENST00000489053 AICDAQ9GZX7 198 aa8.52□□□□□ -1.05
HDAC6-232ENST00000489053 RPF2Q9H7B2 306 aaKnown RBP8.52□□□□□ -1.05
HDAC6-232ENST00000489053 PRDM7Q9NQW5 492 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms