RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 OR1N1Q8NGS0 311 aa14.91□□□□□ -0.02
CTDSP1-209ENST00000488627 OR2W6PQ8NHA6 318 aa14.91□□□□□ -0.02
CTDSP1-209ENST00000488627 TRPC4APQ8TEL6 797 aa14.91□□□□□ -0.02
CTDSP1-209ENST00000488627 ANKRD9Q96BM1 317 aaPredicted RBP14.91□□□□□ -0.02
CTDSP1-209ENST00000488627 ZNF354BQ96LW1 612 aa14.91□□□□□ -0.02
CTDSP1-209ENST00000488627 MAGEB10Q96LZ2 347 aaPredicted RBP14.91□□□□□ -0.02
CTDSP1-209ENST00000488627 PNO1Q9NRX1 252 aaKnown RBP14.91□□□□□ -0.02
CTDSP1-209ENST00000488627 TEKT2Q9UIF3 430 aa14.91□□□□□ -0.02
CTDSP1-209ENST00000488627 MRPS33Q9Y291 106 aaKnown RBP14.91□□□□□ -0.02
CTDSP1-209ENST00000488627 ATG4BQ9Y4P1 393 aa14.91□□□□□ -0.02
CTDSP1-209ENST00000488627 COPG1Q9Y678 874 aaKnown RBP14.91□□□□□ -0.02
CTDSP1-209ENST00000488627 TENM4Q6N022 2769 aa14.91□□□□□ -0.02
CTDSP1-209ENST00000488627 MYOCOSA0A1B0GUC4 107 aa14.9□□□□□ -0.02
CTDSP1-209ENST00000488627 CLEC18AA5D8T8 446 aa14.9□□□□□ -0.02
CTDSP1-209ENST00000488627 OR5H15A6NDH6 313 aa14.9□□□□□ -0.02
CTDSP1-209ENST00000488627 SMIM23A6NLE4 172 aa14.9□□□□□ -0.02
CTDSP1-209ENST00000488627 TCP11X1B4DZS4 312 aa14.9□□□□□ -0.02
CTDSP1-209ENST00000488627 TMPRSS11DO60235 418 aa14.9□□□□□ -0.02
CTDSP1-209ENST00000488627 CDH16O75309 829 aa14.9□□□□□ -0.02
CTDSP1-209ENST00000488627 MYO1DO94832 1006 aa14.9□□□□□ -0.02
CTDSP1-209ENST00000488627 SUPT7LO94864 414 aa14.9□□□□□ -0.02
CTDSP1-209ENST00000488627 PROCP04070 461 aa14.9□□□□□ -0.02
CTDSP1-209ENST00000488627 NUDT17P0C025 328 aa14.9□□□□□ -0.02
CTDSP1-209ENST00000488627 CRHR1P34998 444 aa14.9□□□□□ -0.02
CTDSP1-209ENST00000488627 RAP1GDS1P52306 607 aa14.9□□□□□ -0.02
CTDSP1-209ENST00000488627 HNRNPH2P55795 449 aaKnown RBP14.9□□□□□ -0.02
CTDSP1-209ENST00000488627 PHEXP78562 749 aa14.9□□□□□ -0.02
CTDSP1-209ENST00000488627 ZNF33BQ06732 778 aa14.9□□□□□ -0.02
CTDSP1-209ENST00000488627 SRSF1Q07955 248 aaKnown RBP eCLIP14.9□□□□□ -0.02
CTDSP1-209ENST00000488627 C10orf62Q5T681 223 aaPredicted RBP14.9□□□□□ -0.02
CTDSP1-209ENST00000488627 RPUSD3Q6P087 351 aaKnown RBP14.9□□□□□ -0.02
CTDSP1-209ENST00000488627 CLEC18BQ6UXF7 455 aa14.9□□□□□ -0.02
CTDSP1-209ENST00000488627 GPR180Q86V85 440 aa14.9□□□□□ -0.02
CTDSP1-209ENST00000488627 BEST3Q8N1M1 668 aa14.9□□□□□ -0.02
CTDSP1-209ENST00000488627 CLEC18CQ8NCF0 446 aa14.9□□□□□ -0.02
CTDSP1-209ENST00000488627 B3GNT7Q8NFL0 401 aa14.9□□□□□ -0.02
CTDSP1-209ENST00000488627 L3HYPDHQ96EM0 354 aa14.9□□□□□ -0.02
CTDSP1-209ENST00000488627 SERPINI1Q99574 410 aa14.9□□□□□ -0.02
CTDSP1-209ENST00000488627 CENPKQ9BS16 269 aa14.9□□□□□ -0.02
CTDSP1-209ENST00000488627 ALOXE3Q9BYJ1 711 aa14.9□□□□□ -0.02
CTDSP1-209ENST00000488627 FARSBQ9NSD9 589 aaKnown RBP14.9□□□□□ -0.02
CTDSP1-209ENST00000488627 VTI1BQ9UEU0 232 aa14.9□□□□□ -0.02
CTDSP1-209ENST00000488627 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.9□□□□□ -0.027e-6■■□□□ 11.8
CTDSP1-209ENST00000488627 ZNF223Q9UK11 482 aaPredicted RBP14.9□□□□□ -0.02
CTDSP1-209ENST00000488627 FBXW2Q9UKT8 454 aa14.9□□□□□ -0.02
CTDSP1-209ENST00000488627 ASB4Q9Y574 426 aa14.9□□□□□ -0.02
CTDSP1-209ENST00000488627 V9GYY5 206 aaPredicted RBP14.9□□□□□ -0.02
CTDSP1-209ENST00000488627 UBR5O95071 2799 aaPredicted RBP14.89□□□□□ -0.03
CTDSP1-209ENST00000488627 TRAV17A0A0B4J275 112 aa14.89□□□□□ -0.03
CTDSP1-209ENST00000488627 BLACEA4D250 179 aa14.89□□□□□ -0.03
CTDSP1-209ENST00000488627 PROM1O43490 865 aa14.89□□□□□ -0.03
CTDSP1-209ENST00000488627 LDB3O75112 727 aa14.89□□□□□ -0.03
CTDSP1-209ENST00000488627 GLRA3O75311 464 aa14.89□□□□□ -0.03
CTDSP1-209ENST00000488627 VPS4BO75351 444 aa14.89□□□□□ -0.03
CTDSP1-209ENST00000488627 OR4F21O95013 312 aa14.89□□□□□ -0.03
CTDSP1-209ENST00000488627 SEMA3DO95025 777 aa14.89□□□□□ -0.03
CTDSP1-209ENST00000488627 KRT15P19012 456 aa14.89□□□□□ -0.03
CTDSP1-209ENST00000488627 GNLYP22749 145 aa14.89□□□□□ -0.03
CTDSP1-209ENST00000488627 CPN2P22792 545 aa14.89□□□□□ -0.03
CTDSP1-209ENST00000488627 CD96P40200 585 aa14.89□□□□□ -0.03
CTDSP1-209ENST00000488627 ARL1P40616 181 aaPredicted RBP14.89□□□□□ -0.03
CTDSP1-209ENST00000488627 UQCRFS1P47985 274 aa14.89□□□□□ -0.03
CTDSP1-209ENST00000488627 IGLV3-21P80748 117 aaPredicted RBP14.89□□□□□ -0.03
CTDSP1-209ENST00000488627 SLC18A2Q05940 514 aa14.89□□□□□ -0.03
CTDSP1-209ENST00000488627 MEP1AQ16819 746 aa14.89□□□□□ -0.03
CTDSP1-209ENST00000488627 ERCC6LQ2NKX8 1250 aa14.89□□□□□ -0.03
CTDSP1-209ENST00000488627 C18orf63Q68DL7 685 aa14.89□□□□□ -0.03
CTDSP1-209ENST00000488627 ZYG11AQ6WRX3 759 aa14.89□□□□□ -0.03
CTDSP1-209ENST00000488627 ATCAYQ86WG3 371 aa14.89□□□□□ -0.03
CTDSP1-209ENST00000488627 RPS19BP1Q86WX3 136 aaKnown RBP14.89□□□□□ -0.03
CTDSP1-209ENST00000488627 SLC22A9Q8IVM8 553 aa14.89□□□□□ -0.03
CTDSP1-209ENST00000488627 LGI4Q8N135 537 aa14.89□□□□□ -0.03
CTDSP1-209ENST00000488627 SLC5A8Q8N695 610 aa14.89□□□□□ -0.03
CTDSP1-209ENST00000488627 PTPMT1Q8WUK0 201 aaPredicted RBP14.89□□□□□ -0.03
CTDSP1-209ENST00000488627 ZNF382Q96SR6 550 aa14.89□□□□□ -0.03
CTDSP1-209ENST00000488627 C12orf65Q9H3J6 166 aaKnown RBP14.89□□□□□ -0.03
CTDSP1-209ENST00000488627 CDCP1Q9H5V8 836 aa14.89□□□□□ -0.03
CTDSP1-209ENST00000488627 PRM3Q9NNZ6 103 aa14.89□□□□□ -0.03
CTDSP1-209ENST00000488627 ADAP2Q9NPF8 381 aa14.89□□□□□ -0.03
CTDSP1-209ENST00000488627 MS4A12Q9NXJ0 267 aa14.89□□□□□ -0.03
CTDSP1-209ENST00000488627 VPS4AQ9UN37 437 aa14.89□□□□□ -0.03
CTDSP1-209ENST00000488627 MYO18BQ8IUG5 2567 aa14.88□□□□□ -0.03
CTDSP1-209ENST00000488627 A0A1W2PR48 441 aa14.88□□□□□ -0.03
CTDSP1-209ENST00000488627 WASHC1A8K0Z3 465 aa14.88□□□□□ -0.03
CTDSP1-209ENST00000488627 FGF17O60258 216 aa14.88□□□□□ -0.03
CTDSP1-209ENST00000488627 PLIN3O60664 434 aa14.88□□□□□ -0.03
CTDSP1-209ENST00000488627 CBX6O95503 412 aa14.88□□□□□ -0.03
CTDSP1-209ENST00000488627 KRT4P19013 534 aa14.88□□□□□ -0.03
CTDSP1-209ENST00000488627 CCT5P48643 541 aa14.88□□□□□ -0.03
CTDSP1-209ENST00000488627 ST13P50502 369 aaKnown RBP14.88□□□□□ -0.03
CTDSP1-209ENST00000488627 MLF1P58340 268 aa14.88□□□□□ -0.03
CTDSP1-209ENST00000488627 TAS2R50P59544 299 aa14.88□□□□□ -0.03
CTDSP1-209ENST00000488627 ID2Q02363 134 aa14.88□□□□□ -0.03
CTDSP1-209ENST00000488627 IFT88Q13099 833 aa14.88□□□□□ -0.03
CTDSP1-209ENST00000488627 TUBA3CQ13748 450 aa14.88□□□□□ -0.03
CTDSP1-209ENST00000488627 ELAVL1Q15717 326 aaKnown RBP14.88□□□□□ -0.03
CTDSP1-209ENST00000488627 SGO1Q5FBB7 561 aa14.88□□□□□ -0.03
CTDSP1-209ENST00000488627 ZNF468Q5VIY5 522 aaPredicted RBP14.88□□□□□ -0.03
CTDSP1-209ENST00000488627 TTC19Q6DKK2 380 aaPredicted RBP14.88□□□□□ -0.03
CTDSP1-209ENST00000488627 EMBQ6PCB8 327 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms