RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 NR6A1Q15406 480 aa14.82□□□□□ -0.04
C9orf3-219ENST00000488186 NSDHLQ15738 373 aa14.82□□□□□ -0.04
C9orf3-219ENST00000488186 ZNF595Q8IYB9 648 aa14.82□□□□□ -0.04
C9orf3-219ENST00000488186 ZNF781Q8N8C0 355 aa14.82□□□□□ -0.04
C9orf3-219ENST00000488186 PLPP5Q8NEB5 264 aa14.82□□□□□ -0.04
C9orf3-219ENST00000488186 CHTF18Q8WVB6 975 aa14.82□□□□□ -0.04
C9orf3-219ENST00000488186 FER1L6-AS2Q96M78 137 aa14.82□□□□□ -0.04
C9orf3-219ENST00000488186 PRDM9Q9NQV7 894 aa14.82□□□□□ -0.04
C9orf3-219ENST00000488186 PRTFDC1Q9NRG1 225 aa14.82□□□□□ -0.04
C9orf3-219ENST00000488186 RIC8BQ9NVN3 520 aa14.82□□□□□ -0.04
C9orf3-219ENST00000488186 KCMF1Q9P0J7 381 aa14.82□□□□□ -0.04
C9orf3-219ENST00000488186 LHX6Q9UPM6 363 aa14.82□□□□□ -0.04
C9orf3-219ENST00000488186 IGSF10Q6WRI0 2623 aa14.82□□□□□ -0.04
C9orf3-219ENST00000488186 A0A0A6YYD5 115 aa14.81□□□□□ -0.04
C9orf3-219ENST00000488186 OR2W5A6NFC9 320 aa14.81□□□□□ -0.04
C9orf3-219ENST00000488186 PIP5K1BO14986 540 aa14.81□□□□□ -0.04
C9orf3-219ENST00000488186 PCDH7O60245 1069 aa14.81□□□□□ -0.04
C9orf3-219ENST00000488186 SKAP2O75563 359 aaPredicted RBP14.81□□□□□ -0.04
C9orf3-219ENST00000488186 RSL1D1O76021 490 aaKnown RBP14.81□□□□□ -0.04
C9orf3-219ENST00000488186 FURINP09958 794 aa14.81□□□□□ -0.04
C9orf3-219ENST00000488186 ARRB2P32121 409 aa14.81□□□□□ -0.04
C9orf3-219ENST00000488186 HSD17B7P56937 341 aa14.81□□□□□ -0.04
C9orf3-219ENST00000488186 TBL3Q12788 808 aaKnown RBP14.81□□□□□ -0.04
C9orf3-219ENST00000488186 STX4Q12846 297 aa14.81□□□□□ -0.04
C9orf3-219ENST00000488186 ATP1A4Q13733 1029 aa14.81□□□□□ -0.04
C9orf3-219ENST00000488186 CES4AQ5XG92 561 aa14.81□□□□□ -0.04
C9orf3-219ENST00000488186 MRGPREQ86SM8 312 aa14.81□□□□□ -0.04
C9orf3-219ENST00000488186 SHISA5Q8N114 240 aa14.81□□□□□ -0.04
C9orf3-219ENST00000488186 APIPQ96GX9 242 aa14.81□□□□□ -0.04
C9orf3-219ENST00000488186 ARHGAP9Q9BRR9 750 aa14.81□□□□□ -0.04
C9orf3-219ENST00000488186 LRTM1Q9HBL6 345 aa14.81□□□□□ -0.04
C9orf3-219ENST00000488186 LANCL2Q9NS86 450 aa14.81□□□□□ -0.04
C9orf3-219ENST00000488186 C1orf109Q9NX04 203 aa14.81□□□□□ -0.04
C9orf3-219ENST00000488186 P4HTMQ9NXG6 502 aa14.81□□□□□ -0.04
C9orf3-219ENST00000488186 MMACHCQ9Y4U1 282 aa14.81□□□□□ -0.04
C9orf3-219ENST00000488186 CCDC88CQ9P219 2028 aa14.8□□□□□ -0.04
C9orf3-219ENST00000488186 ARGFXA6NJG6 315 aa14.8□□□□□ -0.04
C9orf3-219ENST00000488186 CYR61O00622 381 aa14.8□□□□□ -0.04
C9orf3-219ENST00000488186 KLF11O14901 512 aa14.8□□□□□ -0.04
C9orf3-219ENST00000488186 PROM1O43490 865 aa14.8□□□□□ -0.04
C9orf3-219ENST00000488186 TMPRSS11DO60235 418 aa14.8□□□□□ -0.04
C9orf3-219ENST00000488186 KITP10721 976 aa14.8□□□□□ -0.04
C9orf3-219ENST00000488186 TPP2P29144 1249 aaPredicted RBP14.8□□□□□ -0.04
C9orf3-219ENST00000488186 HNRNPH2P55795 449 aaKnown RBP14.8□□□□□ -0.04
C9orf3-219ENST00000488186 OR4D2P58180 307 aa14.8□□□□□ -0.04
C9orf3-219ENST00000488186 TRA2BP62995 288 aaKnown RBP14.8□□□□□ -0.04
C9orf3-219ENST00000488186 BTG2P78543 158 aa14.8□□□□□ -0.04
C9orf3-219ENST00000488186 RHAGQ02094 409 aa14.8□□□□□ -0.04
C9orf3-219ENST00000488186 EEF1A2Q05639 463 aaKnown RBP14.8□□□□□ -0.04
C9orf3-219ENST00000488186 PDCD2Q16342 344 aaPredicted RBP14.8□□□□□ -0.04
C9orf3-219ENST00000488186 UGT3A2Q3SY77 523 aa14.8□□□□□ -0.04
C9orf3-219ENST00000488186 GALNTL6Q49A17 601 aa14.8□□□□□ -0.04
C9orf3-219ENST00000488186 BORAQ6PGQ7 559 aa14.8□□□□□ -0.04
C9orf3-219ENST00000488186 QSOX2Q6ZRP7 698 aa14.8□□□□□ -0.04
C9orf3-219ENST00000488186 RNF165Q6ZSG1 346 aa14.8□□□□□ -0.04
C9orf3-219ENST00000488186 MED25Q71SY5 747 aa14.8□□□□□ -0.04
C9orf3-219ENST00000488186 PPP1R32Q7Z5V6 425 aa14.8□□□□□ -0.04
C9orf3-219ENST00000488186 CLNKQ7Z7G1 428 aa14.8□□□□□ -0.04
C9orf3-219ENST00000488186 CRLF3Q8IUI8 442 aa14.8□□□□□ -0.04
C9orf3-219ENST00000488186 TMEM102Q8N9M5 508 aaPredicted RBP14.8□□□□□ -0.04
C9orf3-219ENST00000488186 CLEC1AQ8NC01 280 aa14.8□□□□□ -0.04
C9orf3-219ENST00000488186 C7orf57Q8NEG2 295 aa14.8□□□□□ -0.04
C9orf3-219ENST00000488186 CDC26Q8NHZ8 85 aa14.8□□□□□ -0.04
C9orf3-219ENST00000488186 ADAMTS17Q8TE56 1095 aa14.8□□□□□ -0.04
C9orf3-219ENST00000488186 APOBEC4Q8WW27 367 aaKnown RBP14.8□□□□□ -0.04
C9orf3-219ENST00000488186 TANKQ92844 425 aa14.8□□□□□ -0.04
C9orf3-219ENST00000488186 C8orf44Q96CB5 159 aa14.8□□□□□ -0.04
C9orf3-219ENST00000488186 CRELD1Q96HD1 420 aa14.8□□□□□ -0.04
C9orf3-219ENST00000488186 PPP3R2Q96LZ3 170 aa14.8□□□□□ -0.04
C9orf3-219ENST00000488186 CSF3RQ99062 836 aa14.8□□□□□ -0.04
C9orf3-219ENST00000488186 SORT1Q99523 831 aa14.8□□□□□ -0.04
C9orf3-219ENST00000488186 FAIM2Q9BWQ8 316 aa14.8□□□□□ -0.04
C9orf3-219ENST00000488186 ZNF717Q9BY31 904 aaPredicted RBP14.8□□□□□ -0.04
C9orf3-219ENST00000488186 C20orf27Q9GZN8 174 aa14.8□□□□□ -0.04
C9orf3-219ENST00000488186 RPF2Q9H7B2 306 aaKnown RBP14.8□□□□□ -0.04
C9orf3-219ENST00000488186 PNPOQ9NVS9 261 aa14.8□□□□□ -0.04
C9orf3-219ENST00000488186 MCM8Q9UJA3 840 aa14.8□□□□□ -0.04
C9orf3-219ENST00000488186 ATG4BQ9Y4P1 393 aa14.8□□□□□ -0.04
C9orf3-219ENST00000488186 ASB4Q9Y574 426 aa14.8□□□□□ -0.04
C9orf3-219ENST00000488186 PTGDR2Q9Y5Y4 395 aa14.8□□□□□ -0.04
C9orf3-219ENST00000488186 HS3ST3B1Q9Y662 390 aa14.8□□□□□ -0.04
C9orf3-219ENST00000488186 ATMQ13315 3056 aa14.79□□□□□ -0.04
C9orf3-219ENST00000488186 NSG1A0A0A6YYJ2 146 aa14.79□□□□□ -0.04
C9orf3-219ENST00000488186 SLCO1B7G3V0H7 640 aa14.79□□□□□ -0.04
C9orf3-219ENST00000488186 ERVH48-1M5A8F1 160 aa14.79□□□□□ -0.04
C9orf3-219ENST00000488186 SOCS6O14544 535 aa14.79□□□□□ -0.04
C9orf3-219ENST00000488186 CTNSO60931 367 aa14.79□□□□□ -0.04
C9orf3-219ENST00000488186 SNNO75324 88 aaPredicted RBP14.79□□□□□ -0.04
C9orf3-219ENST00000488186 IFNA16P05015 189 aa14.79□□□□□ -0.04
C9orf3-219ENST00000488186 ANXA4P09525 319 aaPredicted RBP14.79□□□□□ -0.04
C9orf3-219ENST00000488186 NR2F6P10588 404 aa14.79□□□□□ -0.04
C9orf3-219ENST00000488186 MAOAP21397 527 aa14.79□□□□□ -0.04
C9orf3-219ENST00000488186 PPP2R1BP30154 601 aa14.79□□□□□ -0.04
C9orf3-219ENST00000488186 TIA1P31483 386 aaKnown RBP eCLIP14.79□□□□□ -0.04
C9orf3-219ENST00000488186 TNFRSF17Q02223 184 aa14.79□□□□□ -0.04
C9orf3-219ENST00000488186 ATP6AP1LQ52LC2 224 aa14.79□□□□□ -0.04
C9orf3-219ENST00000488186 C18orf63Q68DL7 685 aa14.79□□□□□ -0.04
C9orf3-219ENST00000488186 MRM1Q6IN84 353 aaKnown RBP14.79□□□□□ -0.04
C9orf3-219ENST00000488186 TMEM205Q6UW68 189 aa14.79□□□□□ -0.04
C9orf3-219ENST00000488186 KIRREL2Q6UWL6 708 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms