RNA–Protein interactions for RNA: ENST00000488171.5

CD55-209, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 3

Gene CD55, Length 1,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-209ENST00000488171 SNX15Q9NRS6 342 aa17.99■□□□□ 0.47
CD55-209ENST00000488171 VTI1BQ9UEU0 232 aa17.99■□□□□ 0.47
CD55-209ENST00000488171 KLF13Q9Y2Y9 288 aaPredicted RBP17.99■□□□□ 0.47
CD55-209ENST00000488171 KLF2Q9Y5W3 355 aaPredicted RBP17.99■□□□□ 0.47
CD55-209ENST00000488171 NOTCH2Q04721 2471 aa17.98■□□□□ 0.47
CD55-209ENST00000488171 A0A087X1B8 175 aa17.98■□□□□ 0.47
CD55-209ENST00000488171 ARHGAP10A1A4S6 786 aa17.98■□□□□ 0.47
CD55-209ENST00000488171 SYNDIG1LA6NDD5 238 aa17.98■□□□□ 0.47
CD55-209ENST00000488171 HNRNPRO43390 633 aaKnown RBP17.98■□□□□ 0.47
CD55-209ENST00000488171 SH3BGRLO75368 114 aa17.98■□□□□ 0.47
CD55-209ENST00000488171 ZFAND5O76080 213 aa17.98■□□□□ 0.47
CD55-209ENST00000488171 IFNA16P05015 189 aa17.98■□□□□ 0.47
CD55-209ENST00000488171 HIST1H1TP22492 207 aaPredicted RBP17.98■□□□□ 0.47
CD55-209ENST00000488171 MEOX1P50221 254 aa17.98■□□□□ 0.47
CD55-209ENST00000488171 CKAP4Q07065 602 aaKnown RBP17.98■□□□□ 0.47
CD55-209ENST00000488171 MDGA2Q7Z553 956 aa17.98■□□□□ 0.47
CD55-209ENST00000488171 CCDC91Q7Z6B0 441 aa17.98■□□□□ 0.47
CD55-209ENST00000488171 GHDCQ8N2G8 530 aa17.98■□□□□ 0.47
CD55-209ENST00000488171 RNF175Q8N4F7 328 aa17.98■□□□□ 0.47
CD55-209ENST00000488171 TMEM156Q8N614 296 aa17.98■□□□□ 0.47
CD55-209ENST00000488171 MARVELD3Q96A59 401 aa17.98■□□□□ 0.47
CD55-209ENST00000488171 CCDC77Q9BR77 488 aa17.98■□□□□ 0.47
CD55-209ENST00000488171 LIN28AQ9H9Z2 209 aaKnown RBP17.98■□□□□ 0.47
CD55-209ENST00000488171 YARS2Q9Y2Z4 477 aaKnown RBP17.98■□□□□ 0.47
CD55-209ENST00000488171 CLCA3PQ9Y6N3 262 aa17.98■□□□□ 0.47
CD55-209ENST00000488171 CENPEQ02224 2701 aa17.97■□□□□ 0.47
CD55-209ENST00000488171 SAP18O00422 153 aaKnown RBP17.97■□□□□ 0.47
CD55-209ENST00000488171 LDB3O75112 727 aa17.97■□□□□ 0.47
CD55-209ENST00000488171 PRF1P14222 555 aa17.97■□□□□ 0.47
CD55-209ENST00000488171 EPB42P16452 691 aa17.97■□□□□ 0.47
CD55-209ENST00000488171 SERPINB1P30740 379 aa17.97■□□□□ 0.47
CD55-209ENST00000488171 SSR4P51571 173 aa17.97■□□□□ 0.47
CD55-209ENST00000488171 NAA30Q147X3 362 aaPredicted RBP17.97■□□□□ 0.47
CD55-209ENST00000488171 SETDB1Q15047 1291 aa17.97■□□□□ 0.47
CD55-209ENST00000488171 KHDRBS2Q5VWX1 349 aaKnown RBP17.97■□□□□ 0.47
CD55-209ENST00000488171 GRHL2Q6ISB3 625 aa17.97■□□□□ 0.47
CD55-209ENST00000488171 BNC2Q6ZN30 1099 aaPredicted RBP17.97■□□□□ 0.47
CD55-209ENST00000488171 CHSY3Q70JA7 882 aa17.97■□□□□ 0.47
CD55-209ENST00000488171 FGD2Q7Z6J4 655 aa17.97■□□□□ 0.47
CD55-209ENST00000488171 TEX9Q8N6V9 391 aa17.97■□□□□ 0.47
CD55-209ENST00000488171 ZNF321PQ8N8H1 164 aa17.97■□□□□ 0.47
CD55-209ENST00000488171 POGLUT1Q8NBL1 392 aa17.97■□□□□ 0.47
CD55-209ENST00000488171 MORN4Q8NDC4 146 aa17.97■□□□□ 0.47
CD55-209ENST00000488171 DAZLQ92904 295 aaKnown RBP17.97■□□□□ 0.47
CD55-209ENST00000488171 ANKRD9Q96BM1 317 aaPredicted RBP17.97■□□□□ 0.47
CD55-209ENST00000488171 GPR78Q96P69 363 aa17.97■□□□□ 0.47
CD55-209ENST00000488171 SORBS1Q9BX66 1292 aaKnown RBP17.97■□□□□ 0.47
CD55-209ENST00000488171 OR51B5Q9H339 312 aa17.97■□□□□ 0.47
CD55-209ENST00000488171 NCOA6Q14686 2063 aaPredicted RBP17.96■□□□□ 0.47
CD55-209ENST00000488171 CCDC189A1A4V9 331 aa17.96■□□□□ 0.47
CD55-209ENST00000488171 LRRC14BA6NHZ5 514 aa17.96■□□□□ 0.47
CD55-209ENST00000488171 SYCE1LA8MT33 242 aa17.96■□□□□ 0.47
CD55-209ENST00000488171 KLRC4-KLRK1H3BQV0 150 aa17.96■□□□□ 0.47
CD55-209ENST00000488171 PEX1O43933 1283 aa17.96■□□□□ 0.47
CD55-209ENST00000488171 KLK8O60259 260 aa17.96■□□□□ 0.47
CD55-209ENST00000488171 OR2J2O76002 312 aa17.96■□□□□ 0.47
CD55-209ENST00000488171 ALDOAP04075 364 aaKnown RBP17.96■□□□□ 0.47
CD55-209ENST00000488171 PTGER1P34995 402 aa17.96■□□□□ 0.47
CD55-209ENST00000488171 RFC3P40938 356 aa17.96■□□□□ 0.47
CD55-209ENST00000488171 SSR2P43308 183 aa17.96■□□□□ 0.47
CD55-209ENST00000488171 STX4Q12846 297 aa17.96■□□□□ 0.47
CD55-209ENST00000488171 ACAP2Q15057 778 aa17.96■□□□□ 0.47
CD55-209ENST00000488171 FAM83EQ2M2I3 478 aa17.96■□□□□ 0.47
CD55-209ENST00000488171 AP5B1Q2VPB7 878 aa17.96■□□□□ 0.47
CD55-209ENST00000488171 DEPDC1Q5TB30 811 aa17.96■□□□□ 0.47
CD55-209ENST00000488171 OR14A16Q8NHC5 309 aa17.96■□□□□ 0.47
CD55-209ENST00000488171 HUS1BQ8NHY5 278 aa17.96■□□□□ 0.47
CD55-209ENST00000488171 CMTM7Q96FZ5 175 aa17.96■□□□□ 0.47
CD55-209ENST00000488171 NINJ2Q9NZG7 142 aa17.96■□□□□ 0.47
CD55-209ENST00000488171 MYOTQ9UBF9 498 aa17.96■□□□□ 0.47
CD55-209ENST00000488171 MEMO1Q9Y316 297 aa17.96■□□□□ 0.47
CD55-209ENST00000488171 A0A096LPK6 155 aa17.95■□□□□ 0.46
CD55-209ENST00000488171 KLHL2O95198 593 aa17.95■□□□□ 0.46
CD55-209ENST00000488171 ESRRAP11474 423 aaPredicted RBP17.95■□□□□ 0.46
CD55-209ENST00000488171 ABOP16442 354 aa17.95■□□□□ 0.46
CD55-209ENST00000488171 ALDH18A1P54886 795 aaKnown RBP17.95■□□□□ 0.46
CD55-209ENST00000488171 GPR85P60893 370 aa17.95■□□□□ 0.46
CD55-209ENST00000488171 ID2Q02363 134 aa17.95■□□□□ 0.46
CD55-209ENST00000488171 DDX39BQ13838 428 aaKnown RBP17.95■□□□□ 0.46
CD55-209ENST00000488171 SERTAD2Q14140 314 aa17.95■□□□□ 0.46
CD55-209ENST00000488171 UAP1Q16222 522 aaPredicted RBP17.95■□□□□ 0.46
CD55-209ENST00000488171 PFKFB4Q16877 469 aa17.95■□□□□ 0.46
CD55-209ENST00000488171 OR4C11Q6IEV9 310 aa17.95■□□□□ 0.46
CD55-209ENST00000488171 XKRXQ6PP77 449 aa17.95■□□□□ 0.46
CD55-209ENST00000488171 HSDL2Q6YN16 418 aa17.95■□□□□ 0.46
CD55-209ENST00000488171 ZFP62Q8NB50 900 aaPredicted RBP17.95■□□□□ 0.46
CD55-209ENST00000488171 C16orf52Q8NHV5 167 aa17.95■□□□□ 0.46
CD55-209ENST00000488171 SREK1Q8WXA9 508 aaKnown RBP17.95■□□□□ 0.46
CD55-209ENST00000488171 PHF12Q96QT6 1004 aa17.95■□□□□ 0.46
CD55-209ENST00000488171 OR8D2Q9GZM6 311 aa17.95■□□□□ 0.46
CD55-209ENST00000488171 ACSS3Q9H6R3 686 aa17.95■□□□□ 0.46
CD55-209ENST00000488171 PRM3Q9NNZ6 103 aa17.95■□□□□ 0.46
CD55-209ENST00000488171 DMRT3Q9NQL9 472 aa17.95■□□□□ 0.46
CD55-209ENST00000488171 DEPPQ9NTK1 212 aa17.95■□□□□ 0.46
CD55-209ENST00000488171 ADGRE2Q9UHX3 823 aa17.95■□□□□ 0.46
CD55-209ENST00000488171 TSC22D4Q9Y3Q8 395 aa17.95■□□□□ 0.46
CD55-209ENST00000488171 C17orf105B2RV13 164 aa17.94■□□□□ 0.46
CD55-209ENST00000488171 WWP2O00308 870 aa17.94■□□□□ 0.46
CD55-209ENST00000488171 PLPP1O14494 284 aa17.94■□□□□ 0.46
CD55-209ENST00000488171 TFECO14948 347 aaPredicted RBP17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms