RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 SNX1Q13596 522 aa10.72□□□□□ -0.69
TRIM56-204ENST00000487252 KCTD19Q17RG1 926 aaPredicted RBP10.72□□□□□ -0.69
TRIM56-204ENST00000487252 KRT71Q3SY84 523 aa10.72□□□□□ -0.69
TRIM56-204ENST00000487252 MFSD7Q6UXD7 560 aa10.72□□□□□ -0.69
TRIM56-204ENST00000487252 IL20RBQ6UXL0 311 aa10.72□□□□□ -0.69
TRIM56-204ENST00000487252 CCDC50Q8IVM0 306 aa10.72□□□□□ -0.69
TRIM56-204ENST00000487252 ZNF567Q8N184 647 aa10.72□□□□□ -0.69
TRIM56-204ENST00000487252 DEPDC4Q8N2C3 294 aa10.72□□□□□ -0.69
TRIM56-204ENST00000487252 ZNF441Q8N8Z8 693 aa10.72□□□□□ -0.69
TRIM56-204ENST00000487252 GOLM1Q8NBJ4 401 aa10.72□□□□□ -0.69
TRIM56-204ENST00000487252 B3GNT7Q8NFL0 401 aa10.72□□□□□ -0.69
TRIM56-204ENST00000487252 PEX11GQ96HA9 241 aa10.72□□□□□ -0.69
TRIM56-204ENST00000487252 DNAJC1Q96KC8 554 aaKnown RBP10.72□□□□□ -0.69
TRIM56-204ENST00000487252 CCDC138Q96M89 665 aa10.72□□□□□ -0.69
TRIM56-204ENST00000487252 KCNK17Q96T54 332 aa10.72□□□□□ -0.69
TRIM56-204ENST00000487252 RBCK1Q9BYM8 510 aa10.72□□□□□ -0.69
TRIM56-204ENST00000487252 FRMD8P1Q9BZ68 369 aaPredicted RBP10.72□□□□□ -0.69
TRIM56-204ENST00000487252 ROPN1BQ9BZX4 212 aaPredicted RBP10.72□□□□□ -0.69
TRIM56-204ENST00000487252 PRDM14Q9GZV8 571 aa10.72□□□□□ -0.69
TRIM56-204ENST00000487252 SHARPINQ9H0F6 387 aa10.72□□□□□ -0.69
TRIM56-204ENST00000487252 ROPN1Q9HAT0 212 aaPredicted RBP10.72□□□□□ -0.69
TRIM56-204ENST00000487252 ZNF226Q9NYT6 803 aa10.72□□□□□ -0.69
TRIM56-204ENST00000487252 SPATA7Q9P0W8 599 aa10.72□□□□□ -0.69
TRIM56-204ENST00000487252 KCNE1BA0A087WTH5 132 aa10.71□□□□□ -0.69
TRIM56-204ENST00000487252 A8MXE2 369 aa10.71□□□□□ -0.69
TRIM56-204ENST00000487252 HAT1O14929 419 aa10.71□□□□□ -0.69
TRIM56-204ENST00000487252 PRKNO60260 465 aaPredicted RBP10.71□□□□□ -0.69
TRIM56-204ENST00000487252 ERN1O75460 977 aaKnown RBP10.71□□□□□ -0.69
TRIM56-204ENST00000487252 OR2J2O76002 312 aa10.71□□□□□ -0.69
TRIM56-204ENST00000487252 VWFP04275 2813 aa10.71□□□□□ -0.69
TRIM56-204ENST00000487252 SHBGP04278 402 aa10.71□□□□□ -0.69
TRIM56-204ENST00000487252 RFPL3SP0C7P2 107 aa10.71□□□□□ -0.69
TRIM56-204ENST00000487252 PSMA3P25788 255 aa10.71□□□□□ -0.69
TRIM56-204ENST00000487252 GJC1P36383 396 aa10.71□□□□□ -0.69
TRIM56-204ENST00000487252 SOX3P41225 446 aa10.71□□□□□ -0.69
TRIM56-204ENST00000487252 SSR1P43307 286 aaKnown RBP10.71□□□□□ -0.69
TRIM56-204ENST00000487252 SLC29A2Q14542 456 aa10.71□□□□□ -0.69
TRIM56-204ENST00000487252 OASLQ15646 514 aaKnown RBP10.71□□□□□ -0.69
TRIM56-204ENST00000487252 PDCD2Q16342 344 aaPredicted RBP10.71□□□□□ -0.69
TRIM56-204ENST00000487252 ZNF750Q32MQ0 723 aa10.71□□□□□ -0.69
TRIM56-204ENST00000487252 PRR31Q5SQ13 230 aa10.71□□□□□ -0.69
TRIM56-204ENST00000487252 DENND5AQ6IQ26 1287 aa10.71□□□□□ -0.69
TRIM56-204ENST00000487252 TTC23LQ6PF05 361 aa10.71□□□□□ -0.69
TRIM56-204ENST00000487252 RTL4Q6ZR62 310 aa10.71□□□□□ -0.69
TRIM56-204ENST00000487252 QSOX2Q6ZRP7 698 aa10.71□□□□□ -0.69
TRIM56-204ENST00000487252 LUZP2Q86TE4 346 aa10.71□□□□□ -0.69
TRIM56-204ENST00000487252 LRRC25Q8N386 305 aaPredicted RBP10.71□□□□□ -0.69
TRIM56-204ENST00000487252 RAB42Q8N4Z0 105 aa10.71□□□□□ -0.69
TRIM56-204ENST00000487252 CCDC89Q8N998 374 aa10.71□□□□□ -0.69
TRIM56-204ENST00000487252 SLC35B2Q8TB61 432 aa10.71□□□□□ -0.69
TRIM56-204ENST00000487252 ASB15Q8WXK1 588 aa10.71□□□□□ -0.69
TRIM56-204ENST00000487252 TBC1D20Q96BZ9 403 aa10.71□□□□□ -0.69
TRIM56-204ENST00000487252 CDKN2AIPNLQ96HQ2 116 aa10.71□□□□□ -0.69
TRIM56-204ENST00000487252 VAT1Q99536 393 aa10.71□□□□□ -0.69
TRIM56-204ENST00000487252 TIMP4Q99727 224 aa10.71□□□□□ -0.69
TRIM56-204ENST00000487252 SFXN3Q9BWM7 321 aa10.71□□□□□ -0.69
TRIM56-204ENST00000487252 HEMGNQ9BXL5 484 aa10.71□□□□□ -0.69
TRIM56-204ENST00000487252 SLC6A15Q9H2J7 730 aa10.71□□□□□ -0.69
TRIM56-204ENST00000487252 CALHM2Q9HA72 323 aa10.71□□□□□ -0.69
TRIM56-204ENST00000487252 NLE1Q9NVX2 485 aaPredicted RBP10.71□□□□□ -0.69
TRIM56-204ENST00000487252 QPCTLQ9NXS2 382 aa10.71□□□□□ -0.69
TRIM56-204ENST00000487252 UTP6Q9NYH9 597 aaKnown RBP10.71□□□□□ -0.69
TRIM56-204ENST00000487252 ARMCX1Q9P291 453 aa10.71□□□□□ -0.69
TRIM56-204ENST00000487252 ASIC3Q9UHC3 531 aa10.71□□□□□ -0.69
TRIM56-204ENST00000487252 FBXW2Q9UKT8 454 aa10.71□□□□□ -0.69
TRIM56-204ENST00000487252 ATG4BQ9Y4P1 393 aa10.71□□□□□ -0.69
TRIM56-204ENST00000487252 MALRD1Q5VYJ5 2156 aa10.7□□□□□ -0.7
TRIM56-204ENST00000487252 APOL1O14791 398 aa10.7□□□□□ -0.7
TRIM56-204ENST00000487252 AOAHP28039 575 aa10.7□□□□□ -0.7
TRIM56-204ENST00000487252 LSP1P33241 339 aa10.7□□□□□ -0.7
TRIM56-204ENST00000487252 ACVR1BP36896 505 aa10.7□□□□□ -0.7
TRIM56-204ENST00000487252 BDKRB1P46663 353 aa10.7□□□□□ -0.7
TRIM56-204ENST00000487252 COMPP49747 757 aaPredicted RBP10.7□□□□□ -0.7
TRIM56-204ENST00000487252 VLDLRP98155 873 aa10.7□□□□□ -0.7
TRIM56-204ENST00000487252 IFFO1Q0D2I5 559 aa10.7□□□□□ -0.7
TRIM56-204ENST00000487252 FOXF2Q12947 444 aa10.7□□□□□ -0.7
TRIM56-204ENST00000487252 SF3B4Q15427 424 aaKnown RBP eCLIP10.7□□□□□ -0.7
TRIM56-204ENST00000487252 TMEM249Q2WGJ8 235 aa10.7□□□□□ -0.7
TRIM56-204ENST00000487252 P3H1Q32P28 736 aa10.7□□□□□ -0.7
TRIM56-204ENST00000487252 ICE2Q659A1 982 aa10.7□□□□□ -0.7
TRIM56-204ENST00000487252 ADGRD1Q6QNK2 874 aa10.7□□□□□ -0.7
TRIM56-204ENST00000487252 FAM47EQ6ZV65 393 aa10.7□□□□□ -0.7
TRIM56-204ENST00000487252 BBS12Q6ZW61 710 aa10.7□□□□□ -0.7
TRIM56-204ENST00000487252 BTLAQ7Z6A9 289 aa10.7□□□□□ -0.7
TRIM56-204ENST00000487252 MILR1Q7Z6M3 343 aa10.7□□□□□ -0.7
TRIM56-204ENST00000487252 CYP4X1Q8N118 509 aa10.7□□□□□ -0.7
TRIM56-204ENST00000487252 ZNF611Q8N823 705 aa10.7□□□□□ -0.7
TRIM56-204ENST00000487252 OR5T3Q8NGG3 340 aa10.7□□□□□ -0.7
TRIM56-204ENST00000487252 LKAAEAR1Q8TD35 194 aa10.7□□□□□ -0.7
TRIM56-204ENST00000487252 TM4SF19Q96DZ7 209 aa10.7□□□□□ -0.7
TRIM56-204ENST00000487252 SGCZQ96LD1 299 aa10.7□□□□□ -0.7
TRIM56-204ENST00000487252 PTCHD1Q96NR3 888 aa10.7□□□□□ -0.7
TRIM56-204ENST00000487252 RASL10BQ96S79 203 aa10.7□□□□□ -0.7
TRIM56-204ENST00000487252 SLCO5A1Q9H2Y9 848 aa10.7□□□□□ -0.7
TRIM56-204ENST00000487252 CNOT10Q9H9A5 744 aaKnown RBP10.7□□□□□ -0.7
TRIM56-204ENST00000487252 ANKHQ9HCJ1 492 aa10.7□□□□□ -0.7
TRIM56-204ENST00000487252 SH2D2AQ9NP31 389 aa10.7□□□□□ -0.7
TRIM56-204ENST00000487252 SACM1LQ9NTJ5 587 aa10.7□□□□□ -0.7
TRIM56-204ENST00000487252 KLHL28Q9NXS3 571 aa10.7□□□□□ -0.7
TRIM56-204ENST00000487252 MYOTQ9UBF9 498 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms